SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03823
Annotation
_gustatory_receptor_17_[Bombyx_mori]
Full name
Gustatory receptor      
Location in the cell
PlasmaMembrane   Reliability : 4.506
 

Sequence

CDS
ATGGGTTTTTCACTTGGAACAACAGCATTGTCAATGTTCTTTTTTGAGAAACCTGTTGTTTTTACTATAATTCAAATAACAATGATCATAGTTAAACCTGCCAAATATAAATTGAGTGACCCGTTTAGGCCGAAAGATACATCGAAATTATCAGAGTCTATAATTATGTATTTCAAATTGTTTCACATATTTTTAGGCATCGATCTTGGTGGATTTCGTTACCAGAATCGACAAGTCAAATACGCTGTGAGATTAATATCATTGATCCAGCCATTAGCCATTTATGGTTTGTGTATATACGCTTTATTAAAAATTATTGCGAACACTGAATTCTTATGGTACACTATATCCTTCACCGAATATGTAGCTATGTCTGTCGCCATTACGCTATTCAGTAACGAAATGACGTACTGCAATTTTATGATTAATTTAAAGTTCATCGATACAAAATTGAAAATTGGCGATGAATCGTTCAGAATTGGAGTGAAGCTTATATCCAGTACTATTCTCATCGGAGTTACTAGATGTTTCACGACGACGACTTATTGTCTCCTTGGCTTCTGTGCAAAACCGACTGCAGCACAAATTTTATTCCAAATACCGTGGCTCACGATAGACTTAATGCTTTTACAATACATGTTTATATTCTATGCGTGCTACTGTCGCTTAGTGAAAATCTTGAGAATTTTGAAAAAGCGGAACACAGATATAGAGGAGATGCGTAGGATTTATAAAACACTAGTTGACGTGTTGGATAGAGCAAGAGCGCCATTTGATTTAGCGGTGAGTGAACCATTCGTTTTTTTAAGAATTTTCTAA
Protein
MGFSLGTTALSMFFFEKPVVFTIIQITMIIVKPAKYKLSDPFRPKDTSKLSESIIMYFKLFHIFLGIDLGGFRYQNRQVKYAVRLISLIQPLAIYGLCIYALLKIIANTEFLWYTISFTEYVAMSVAITLFSNEMTYCNFMINLKFIDTKLKIGDESFRIGVKLISSTILIGVTRCFTTTTYCLLGFCAKPTAAQILFQIPWLTIDLMLLQYMFIFYACYCRLVKILRILKKRNTDIEEMRRIYKTLVDVLDRARAPFDLAVSEPFVFLRIF

Summary

Description
Gustatory receptor which mediates acceptance or avoidance behavior, depending on its substrates.
Similarity
Belongs to the insect chemoreceptor superfamily. Gustatory receptor (GR) family.
Pfam
PF08395   7tm_7
Interpro
IPR013604   7TM_chemorcpt       

Ontologies

Topology

Subcellular location
Cell membrane  
Length:
272
Number of predicted TMHs:
6
Exp number of AAs in TMHs:
130.13543
Exp number, first 60 AAs:
28.40448
Total prob of N-in:
0.96119
POSSIBLE N-term signal
sequence
inside
1  -  12
TMhelix
13  -  30
outside
31  -  49
TMhelix
50  -  72
inside
73  -  84
TMhelix
85  -  107
outside
108  -  121
TMhelix
122  -  144
inside
145  -  164
TMhelix
165  -  187
outside
188  -  201
TMhelix
202  -  224
inside
225  -  272
 
 

Population Genetic Test Statistics

Pi
199.215991
Theta
152.154947
Tajima's D
0.758664
CLR
8.755185
CSRT
0.591970401479926
Interpretation
Uncertain
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