SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03805  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA010010
Annotation
sericotropin_precursor_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 2.615
 

Sequence

CDS
ATGAAGACTTTTATCGTGTTCGTCGTCTGCGTTGTCTTGGCTCAGGCCCTCACAGATGAGCAGAAGGAGAACTTGAAGAAACACAGAGCCGACTGTCTCTCCGAGACGAAAGCTGATGAACAATTGGTGAACAAACTGAAGACAGGCGACTTTAAGACTGAAAACGAACCATTGAAGAAGTATGCTCTATGTATGCTGATCAAATCACAGCTGATGACCAAGGACGGGAAATTCAAGAAGGACGTCGCTCTGGCTAAAGTGCCTAATGCTGAAGACAAATTGAAAGTAGAGAAGCTGATTGACGCTTGCCTGGCCAACAAAGGCAACAGCCCTCACCAAACAGCCTGGAATTATGTGAAATGCTACCACGAGAAAGACCCGAAGCACGCTCTTTTCTTAGTGATGGTTAACAAAAGTGAACCATTCAAAATGGGAGCGTCGAAAGAAATGCGTTCCTTCGTAATACTATTGAATTACGGTCTTCTGTGCTGTGGGCAGTTCATGCCAGAGGACTATTATTACGATATCGTGACGAGAGATCCTGACGATCTGATGCGAGAGAAAGAGAATGAAGTCCGGGCCCTGAGAGCATTCCAGGCTGATTGTGCGGAGGACGTCCAGGTCAAGCCGGATTTAGTGGTCAACTTGAAGAGCGGTGACTGGCAGACTGAAGACGTATCTCTCAAGAAATGGGCCCTCTGTGTGCTAATGAAACTCGGACTCATGACGGCACAAGGGGTGTTCAAAATGAACGAAGCCATGTCTAAGATTCCAGATATGAATGATAAAATCATAGCAGAGAAACTTATCGACGATTGCCTCAGTCTCCAGGCAACAACGCCACACGACGCCGCATGGAACTACATTAAATGTCATCATCAGAAAGATCCCGAGGGAAATTTTTCTTCCTTAAACATCTTCTGA
Protein
MKTFIVFVVCVVLAQALTDEQKENLKKHRADCLSETKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGKFKKDVALAKVPNAEDKLKVEKLIDACLANKGNSPHQTAWNYVKCYHEKDPKHALFLVMVNKSEPFKMGASKEMRSFVILLNYGLLCCGQFMPEDYYYDIVTRDPDDLMREKENEVRALRAFQADCAEDVQVKPDLVVNLKSGDWQTEDVSLKKWALCVLMKLGLMTAQGVFKMNEAMSKIPDMNDKIIAEKLIDDCLSLQATTPHDAAWNYIKCHHQKDPEGNFSSLNIF

Summary

Pfam
PF01395   PBP_GOBP
Interpro
IPR006170   PBP/GOBP        + More
IPR036728   PBP_GOBP_sf       
SUPFAM
SSF47565   SSF47565       
Gene 3D
PDB
1C3Z     E-value=7.44736e-06,     Score=117

Ontologies

Topology

SignalP
Position:   1 - 16,         Likelihood:  0.998147
 
 
Length:
307
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.61297
Exp number, first 60 AAs:
0.09589
Total prob of N-in:
0.04375
outside
1  -  307
 
 

Population Genetic Test Statistics

Pi
163.539161
Theta
155.076796
Tajima's D
0.359919
CLR
0.621632
CSRT
0.473076346182691
Interpretation
Uncertain
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