SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03803  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA010014
Annotation
hypothetical_protein_KGM_12751_[Danaus_plexippus]
Location in the cell
Nuclear   Reliability : 3.564
 

Sequence

CDS
ATGCAGTTGAAAGATGTCTTCTGTTGTATCGTTTTCATGGTTACAGTAGCGGCATCATGCGTGAAAGCTGAAAATCAAAAACATGATCTGCAAGAACCAAGCGAAGAGAAAAGAATCAGGAAACGAGACGCCACGATGCTCATCGACAACTTCCCGATGGATTCTAGTTACCAGAATCCGAAAATCATCTACAGACGCATATCAAAAATATCGAGGCAACGCTACGGACCGCCTAAACCAAAATATGGGCCGCCCAGACCTGTTTACGGACCACCGAAATCAAGGAAACCGGGTAAGAAGTACTACGGAAAAGTCAACCCGAGATACGGCCCTCCTAGTCACAAAAAACGGTCATCGAAACCAAAGCCGAGATACGGTCCCCCGAAACGTCAAAGCAAGCCTGTCTACGGACCACCAAAGAAGATCCCGTATAACCACTACCAACCAGAAGTGGCTGGATTTGGCGAACCGCCCATTCAAAACTCCAATGACTATAACACCCACAAAAAGACTTACGGTGAGCCTCCGGTCGATTCCTACGGAGCTCCAATTAAAGCGTCCTTAAAGGACATTTACCCTGCAACGTCTGGCTTAAAAGGCCCAACTAGCTACTTCGAAGCTGACTACAGCAATTACGGTGATGAGTACAAATCTTGGAAGAGCTACCAACAAGATAAGAACATAGACAGTGCATACGCGTTCACAAAAAAGCACCCTAAATTCGTAAAACCAAAACTTGAGCTTTTCGTCACACCTGCAACTCCTGGAATGGAGAATAATGAAGAAAATCTGTCATACTCCGATGTCTACATGCACAAACAGAAGGAGAGAGTAAAGAAGCCCCTGATGCAAGATTCCAAAACGAATAAGCCGTGGAAGGTCGAGAAGAAACCGGTCGATAATGATGAGGAAATAATAATTGGGGGTCAATATGCTGAGCCTCCAGCGAGGTACATACCGAAATACCCGCCAAGTGTCTCCATGATGGCTGACGATGGAGAGTTCTCTCCGAAAGGCTACGTAGATCCTGACACTACCGAATCCGCTACTGTTTCCCCTTACGTGAACTACAAGAACAGCAATCTAGCTTTCAACCCTCAGAATCTAAACGACGCTTTTAGTATACCTGAATAG
Protein
MQLKDVFCCIVFMVTVAASCVKAENQKHDLQEPSEEKRIRKRDATMLIDNFPMDSSYQNPKIIYRRISKISRQRYGPPKPKYGPPRPVYGPPKSRKPGKKYYGKVNPRYGPPSHKKRSSKPKPRYGPPKRQSKPVYGPPKKIPYNHYQPEVAGFGEPPIQNSNDYNTHKKTYGEPPVDSYGAPIKASLKDIYPATSGLKGPTSYFEADYSNYGDEYKSWKSYQQDKNIDSAYAFTKKHPKFVKPKLELFVTPATPGMENNEENLSYSDVYMHKQKERVKKPLMQDSKTNKPWKVEKKPVDNDEEIIIGGQYAEPPARYIPKYPPSVSMMADDGEFSPKGYVDPDTTESATVSPYVNYKNSNLAFNPQNLNDAFSIPE

Summary

Ontologies

GO

Topology

SignalP
Position:   1 - 23,         Likelihood:  0.961927
 
 
Length:
377
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.07403
Exp number, first 60 AAs:
0.07403
Total prob of N-in:
0.01486
outside
1  -  377
 
 

Population Genetic Test Statistics

Pi
182.244883
Theta
164.477248
Tajima's D
0.46291
CLR
0.11818
CSRT
0.504524773761312
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
26280517 GPFHFR 100.00 5e-06
26280517 YNVSVIGTPIQSIVDTEDRK 100.00 3e-05
26280517 TYFDWIVVDAK 100.00 7e-04
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