SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03798
Annotation
PREDICTED:_MAP7_domain-containing_protein_1-like_isoform_X2_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 4.041
 

Sequence

CDS
ATGGTTGATGACGTGAGAAATATTAACGAAACCGCTGAAAGCAAAGAGGCCATCGACCGGTCGAGATTAGCGCGGGAGAGACGTGAAGCAGAGCAAAGAAAGCGACTAGACGAACTTCGAGCGCACGCTGCGGCCGCACAGGCGCAGAGAGAGAAACGAGACGAGGACCGGAGACGGAGGCAGGCCGAGCAGAGAGCAAAGGACGACGACAGACGACAACAGGTGGAAGAACGGAAACGTGCAATATGGGAAGCGTCCATATCCCGGCGCGAAGCTTTATTGCAACGAGAGAAGGACCGAGCGGAGCGCATGGAACGCGCCCGCGCCGCCCGGTCTTCGCCCCGACCGGCGTTCGCTTTCGGTTCTTCGACACCGCGGCTCCTGGATCCGCTAGATTCGGCCGGATTCTTCTGGGCAGCGCGCAGGGCGGCATCAACAACGAACGTGATGTTCACATCTGCGCCGCTCACGAGACGAGCTTCAGCACTGCAACTTGACTCTTCAGACACCGACACTAAAGACGAGCCGGACCGGCAGCCGGCGCCGGCGTGGACGTCAGTGGCGCGTCGCCGCACCGACCTGGTGCCGACCGTGCCGCTGGGCCGCGCGCCAGGTAGGGCCCACTCCATGACCAGACTCGACCGTCTGCCCTCAGCCCGGCCCTTACACTCGGCGTCGCCCTCCATGCACCATCTCAACAGGACCCAACCGCGCTCCGGCGAGACGACGCCGGGCTCGCGGCCGGGCAGCGCGCTGTCGCAGGCCGCCGTGCCGCGCCGCCCCGCCTCCACGCCGCGCCGCCCGCGCCCCGCCTCCATCGCCGGCACCGGCCTCAACACGCCCAGAGGCGGGCTGGGCGAGAGCATGTCCCAGAGCGCGGCCAGCACGCCCAGCGTGTCCCGCGACAGCACGCTGGCCGCCGCCCCGCGCCGCGCGCGCCCGCTCTCCCTGCACGCGCCGCTCCGCACCGGTACGTACGCGCACGCACACGCACGCACACACGATATAAATCTAAATTAA
Protein
MVDDVRNINETAESKEAIDRSRLARERREAEQRKRLDELRAHAAAAQAQREKRDEDRRRRQAEQRAKDDDRRQQVEERKRAIWEASISRREALLQREKDRAERMERARAARSSPRPAFAFGSSTPRLLDPLDSAGFFWAARRAASTTNVMFTSAPLTRRASALQLDSSDTDTKDEPDRQPAPAWTSVARRRTDLVPTVPLGRAPGRAHSMTRLDRLPSARPLHSASPSMHHLNRTQPRSGETTPGSRPGSALSQAAVPRRPASTPRRPRPASIAGTGLNTPRGGLGESMSQSAASTPSVSRDSTLAAAPRRARPLSLHAPLRTGTYAHAHARTHDINLN

Summary

Pfam
PF05672   MAP7
Interpro
IPR008604   MAP7_fam       

Ontologies

Topology

Length:
339
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00135
Exp number, first 60 AAs:
0
Total prob of N-in:
0.04619
outside
1  -  339
 
 

Population Genetic Test Statistics

Pi
188.233517
Theta
169.325088
Tajima's D
0.060648
CLR
2.112829
CSRT
0.389030548472576
Interpretation
Uncertain
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