SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03788
Annotation
PREDICTED:_postreplication_repair_E3_ubiquitin-protein_ligase_RAD18-like_isoform_X1_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 4.101
 

Sequence

CDS
ATGGAATTGACGTGTTCGCTTTGCAAAAAAACTACGAAACAAAATGAAATCATTGTTACAACAACGTGCGGGCATATATTTCACGATGATTGTATACAAGAATCGTTGAAAAGCTCCCACACCTGCCCGGAATGTCACAAACCTATTAAAAATGAATCCTTACTGCGTTTATATTTAAATGTAGGCGACGAAAGTTTGGAAATTGAGTCCGAAATCAAATACCTTAGTTTGAAACTGAAAAAAATACAACAATTACTGAAAAAAGACGAAAAAGAATGTGAAGATTGGAACAGAGCAATAACATCAGAACGTGACTGTTTGAATTCAATAACGAAGCAATTAGAGATGTTTAAAAAAAATTACAATGATATAGAAGCCTCAAACCCAATGAGTCGTAAAGAAATGCAAGATCTATATACAGAATTAAAAGAATTTAATGCGGATCGAATTGAAGATGTAGAGCTTGTGGTGGAAACACTATCGACCATGCTCACCGAATATGGAAGGATGAATAGTTCAAATGAACAAAAAGCTAGATGCTATCAAAGAAGAATGGCTGAGCTTAAAGCGAACGTGCGAACGTTAAAGAGTCGAAACTTAGGGGCTTCAGCTCTGATCAAGACGTGTAATTCTTTGACCAATAATTTACGGCCGGTCATTGAAGGAATTGGCAGCTTGCTTCAAGAAAATTAA
Protein
MELTCSLCKKTTKQNEIIVTTTCGHIFHDDCIQESLKSSHTCPECHKPIKNESLLRLYLNVGDESLEIESEIKYLSLKLKKIQQLLKKDEKECEDWNRAITSERDCLNSITKQLEMFKKNYNDIEASNPMSRKEMQDLYTELKEFNADRIEDVELVVETLSTMLTEYGRMNSSNEQKARCYQRRMAELKANVRTLKSRNLGASALIKTCNSLTNNLRPVIEGIGSLLQEN

Summary

Uniprot
ProteinModelPortal
PDB
5AIU     E-value=3.74954e-06,     Score=118

Ontologies

Topology

Length:
230
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00041
Exp number, first 60 AAs:
0
Total prob of N-in:
0.09198
outside
1  -  230
 
 

Population Genetic Test Statistics

Pi
223.450113
Theta
154.226766
Tajima's D
1.251097
CLR
0.089084
CSRT
0.726613669316534
Interpretation
Uncertain
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