SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03787  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA010018
Annotation
hypothetical_protein_KGM_05504_[Danaus_plexippus]
Location in the cell
Cytoplasmic   Reliability : 2.228
 

Sequence

CDS
ATGCCTGGTAAAATAAAAGTCAAAGTCCTGGCTGGTAGGAACCTTCCGGTGATGGACAGGGCAAGCGACACAACGGATGCTTTTGTAGAGATCAAGTTCGGTGGAGTGACACACAAGACTGATGTATGCCGAAAGTCATTAAACCCTCATTGGAACAACACAGAGTGGTATAGGTTTGAAGTTGATGAATCGGAGCTGCAGGATGAACCATTGCAACTTCGACTAATGGACCACGACACGTATTCGGCCAATGACGCTATCGGGAAGGTGGTGATTAGTCTAGCGCCCTTATTGGCGCGAGAGGCCAATAATCCGAAGAGTACCACAGCTCCTCATGGAGGTGCAGTATTGTCCGGCTGGATTCCGGTCTTCGACACCATGCACGGTATCCGAGGAGAGTTGAACGTGATCGTGAAAGTGGAACTCTTCTCTGACTTCAACAAGTACAAGACCTCGAGTTGCGGGGTCCAGTTCTTTCATTGTCCGATGATACCTCCCGGATATCGTGCCAACTCGATCCACGGCTTTGTCGAGGAGTTGGTAGTGAATGACGACCCCGAATACCAGTGGATCGATAAAATCCGAACGCCGAGAGCTTCGAACGAAGCCAGACAAGTTGCCTTCATCAAACTGAGTAATCAGGTATATTATATAGTATTTGTGTAA
Protein
MPGKIKVKVLAGRNLPVMDRASDTTDAFVEIKFGGVTHKTDVCRKSLNPHWNNTEWYRFEVDESELQDEPLQLRLMDHDTYSANDAIGKVVISLAPLLAREANNPKSTTAPHGGAVLSGWIPVFDTMHGIRGELNVIVKVELFSDFNKYKTSSCGVQFFHCPMIPPGYRANSIHGFVEELVVNDDPEYQWIDKIRTPRASNEARQVAFIKLSNQVYYIVFV

Summary

EMBL
AGBW02009831    OWR49789.1    ODYU01006105    SOQ47654.1    RSAL01000151    RVE45749.1    + More
GDQN01001792    JAT89262.1    NWSH01005605    PCG64102.1    PCG64101.1    KQ460869    KPJ11793.1    AGBW02014315    OWR41890.1    KQ459167    KPJ03475.1    AJVK01030101    GDHF01030675    JAI21639.1    GDHF01026923    JAI25391.1    GDUN01000708    JAN95211.1    GEZM01055054    JAV73195.1    GBXI01017083    JAC97208.1    GEZM01055046    GEZM01055044    JAV73212.1    GAMC01015374    JAB91181.1    GAKP01013834    GAKP01013833    JAC45118.1    JRES01000953    KNC26833.1    CCAG010012732    GBXI01012196    JAD02096.1    GAMC01015379    JAB91176.1    KQ435776    KOX74890.1    GEBQ01025367    JAT14610.1    GAKP01013832    JAC45120.1    KQ978881    KYN27744.1    KQ978323    KYM95122.1    KQ982762    KYQ51022.1    KQ414735    KOC62182.1    GEZM01055048    JAV73204.1    GEZM01055050    JAV73200.1    KQ981693    KYN37705.1    CH902661    KPU74897.1    KZ288215    PBC32679.1    KQ976588    KYM79698.1    GECU01023755    JAS83951.1    ADTU01018771    ADTU01018772    ADTU01018773    AAAB01008987    APCN01000876    GANO01004350    JAB55521.1    EAA00823.5    GGFJ01001213    MBW50354.1    GGFJ01001211    MBW50352.1    GGFJ01001212    MBW50353.1    GGFK01004877    MBW38198.1    GGFK01004867    MBW38188.1    GEBQ01004076    JAT35901.1    GGFK01004878    MBW38199.1    GEBQ01010080    JAT29897.1    ADMH02001846    ETN60919.1    AXCN02001521    BABH01024765    BABH01024766    BABH01024767    BABH01024768    PYGN01000292    PSN49147.1    AE014297    AAF56286.2    AGB96295.1    GECU01035463    JAS72243.1    KK852482    KDR22889.1    GL436457    EFN71921.1    GFDL01001026    JAV34019.1    CH477432    EAT41021.1    CH964251    EDW83407.1    GEZM01055052    JAV73198.1    GEZM01055049    JAV73202.1    GL451937    EFN78199.1    AAN13993.2    CH479182    EDW33945.1    CM000070    EAL28279.3    GDIQ01095321    JAL56405.1    KK107182    EZA55949.1    AXCM01008204    GDIQ01195233    JAK56492.1    QOIP01000011    RLU16689.1    OUUW01000007    SPP83312.1    CH954182    EDV53870.1    EDV34008.1    CM000160    EDW98959.1    KQ971307    EFA12018.2    GDIQ01146860    JAL04866.1    CH933806    KRG01646.1    GEZM01055051    JAV73199.1    GEZM01055053    JAV73196.1    GL762137    EFZ22008.1   
Pfam
PF00168   C2
Interpro
IPR038983   C2CD5        + More
IPR000008   C2_dom       
IPR037785   C2_C2CD5       
IPR001565   Synaptotagmin       
IPR035892   C2_domain_sf       
IPR035439   UPF0145_dom_sf       
IPR006627   TDU_repeat       
SUPFAM
SSF117782   SSF117782       
Gene 3D
PDB
6ANK     E-value=1.01898e-07,     Score=131

Ontologies

Topology

Length:
221
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00940999999999999
Exp number, first 60 AAs:
0
Total prob of N-in:
0.06352
outside
1  -  221
 
 

Population Genetic Test Statistics

Pi
30.0839
Theta
20.256727
Tajima's D
-1.461906
CLR
1.799123
CSRT
0.0630968451577421
Interpretation
Uncertain
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