SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03786  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA010018
Annotation
PREDICTED:_uncharacterized_protein_LOC106131643_isoform_X1_[Amyelois_transitella]
Location
Bomo_Chr7(-):1730217-1741757      View in EpiBrowser
Location in the cell
Nuclear   Reliability : 3.692
 

Sequence

CDS
ATGGACGAGCTTCAAAAGCTGGTGAACATACTTAATCCAAAAGCTCCATCCTTGTTGGATGATCAAATAGACGACGATGACGATAAGAGCTTTGAACTAAACCGAAAGTCCAGTGTTAAAAGTTATACGGGCAACATCTCGCTGTACCAAGATCAATATGTCTCTCAGAAGAGTCTTAAACATATCACCGAAGATCAAACTGATTTGAACCGACTTCTGAATAAAAGAGATGACTACGATTCAGATTCATCTGGACCGATAAAAAAAATAAAAAAGCTAAAAACAAATTTCTTTTCAAAGAGATTCTCTGTTCGTTCCCGTAAATCAGAGAAAGATGCTGATCTAATTTCATTGAAGTCTAACTCTTCGGATAATTCACGTATTTCCATACTCGATATAAAGAATGAGATAAAAAAATTGAAGAGATTGAAGAAACCGAAATTACCTAAGCCAACGGCTAATAAAGAAGAGGAGGGTGAGGGTATGGCGTCTATACTGGCGCGGTCAGTGATCCACGCAAACACTAGTTTGGCTTGCATAGCGGAAACCCACGATTCGGAACACTCACCATGCTCCACGTTGAGACGCACCAGCGAATCTGAACCCACTCTTAATTTATCCGACGACGATAAAACTAGAGCAACTTCCGCAGATCGTAACGAGACGGAGGAAACAAAAAAGGTTCCTGAAATACATTTTACGTCACTGACAAATATTACCAGTGAAGAAATTGAACCGACTAGAGTAAGAAAAATATCGGAATCTTGTCCTACCTCGCCTGTTGCTGAAAGAACAGAGAATCTCCTGAAATTACCCGGAGATCCGGAATATTTTGATTCGGTATCGTCTGCGCTATCTGGGGAGAGTTCCGATATTTACTCGAGTTCTGATGAAGATGATGAAAGTTCAGATCTGAAAACTGATAATGAGAGATCGATTGAAACAACCAGCTCCGTTGTACGCTCTGTACTCAACCATGAGGTCAATCCAGCCATAATAGCACAGATGGGTAGAAAACTGAGCATACTGGAAAATGAAACTTCAGATGGTGAAGAAAAAAGAAACCAAGATTTGAGTATGAAAAGCAAATCATTGGAATCAGTACCTGTTGAAATGAAAAGTGAAGTCAAAGTTCCAATTAAACATGAAGCTTCAACGTCTGCTAGAGACTTAAATACGTCTGTAATGAAACCGAACACTCACTACATTAAACTACATAATCCGTTTGCTCATAAAAAGGCTTCCAAAAGTATTAGCGCTCCTTCTTCCCCAACTGAAAAGAACAGCTTTGTAAATCGCTCTTCAAAAAAAATTAAACGGCAACTCTCTAAAATTTCCAAAAGCAGCATGATTAAAAGCTTATCTCATTATTCTCTGTTACCAAAGAAAAAGGACGAGAAGGTCACCCTCAGCCACCCTGGTTCCTCGTCCAACATAACATCAAAAGTAAGCACCGGCGACACTGTTTTAGGATCCCCTTTTCTGTCATACTCTGACCTGATGAGCCTTGACAAAGTGTCAATAGCTACACAAAAAGCCATGTGCAAAAGCGATGATTTCGATCCAAAAAAAGTATCCATGTACATTGGTTCGGAACCTGAGTCTAGATGTTCTTTCAGTGGTCCCTCCTCACCTCAACACAGAGATGATTTGGACCACCCCAATATTAATAAAAAAGAAAAAGCTAGTTTGAAACCAACAGGTTTATTGCACACAGCTATGGAAACCATTCTAATTGACCGCGTCCACTCATTACTTATACCCACTTCTCCTGATCCAGTTAACTCCAAAGCAAAGCAGTTTTTTAATGATGTGAGCTTAAAACTTGAACAGGTTGAGTCATCAAGGAGCCTGAAGGAATCGAATGGACATTTGAGCGTTCCACCTAAGACCAACAAAGCACAATCACTACCACCAGAATCACCGGTGTATAATAGTGTAAAAACGAAACCATTTCTTGACGACTTCAGACACAGCAAAGCTAAAAGCTCCGAATCTAAAGGATTGATCCATACCGCGATGGAAACAATCCTTCTTGATAAAGCGCAATCCATAATTGGACCGGTAACACCTGAACCTAAAACATCAATACACTTTCCTAACTTTAATAAAAAAGAAAAGTCAAAGCCCAAGCATTGCACTGGTCTTGTTCAAACGGCTATGCAAACCATGCTCTTGGATACAGTACAGAGCGTATTGCTCGAAACGCCAGAACCAAGCCCTACAAGTCTTACGTTTGAAATAAAAGATAAATATGATAACACGGAAACGGACAGCAACACTAGAGACAGCACGGGCTTGGTCCATACAGCCCTGGAAACTATTTTACTCGATCAAGTACAAAATATTTGTGCACCCATAGAAATTGCAACGAATGAAGGTTCTAAAATTAACCAAATACATAATAAAGACGCAGCTATGAGTGTTTGTGAAACTGCTATTCTAAAAGCTGCATCTGATAAAACTGACCAACCGAAAAATGTGTTAACAGATGAGCCTGAAAAAAAGTTGGAAGAATTACAGTCTCCTGGTTTAGTACAAATGGCAATGGAAACAATATTAATTGATAAAGTACAATCATTGTTGGATCCAAACAACGGTGCGCCCAGTAAAAGTACCGACCCTGTTAAAAATCCAAATGAATTCACGACCACACATACTTTTGCTGCGACTTCTACCAATGAAAGTAATGCTACCGAAAAAAATGAAACCGAAATTAATAAAGAAAACGAAGATTCAAAAATTGAAAAACAAGTTAATAAACCAGAATACGAGCAGGAAGTTAATCAAGACTTTAAATCGACAAACACAAAAAAACTAACGAGGCAAGAGAGCATCCATTCGGTGACCGAATCGCTAAAAATGTCAAACGAAAACATAGCTAACGTTCCACATAAAATAACAAAGCCCATGCTGCAAAACTTCCACCCAATACTCAGCGGTGTGCCTCTAGAGACCATCCCATCATTGCCTGAGAGCAGTCTCGATCGCGCCGAGAGCCTGGACGTCGAGGGCGTCGAGAATAACGATAGTGTCGGTGTGTGTGGTAACTCGCATGCAGTGTGCGGTGTCGGCAGGAGCGAGCGGGACAGGGACAGGTGCGACAAGGACAAGGGATCGCCTCGACACGCGCGTCACGAGTCGTATGGCGGCCGAGACCCGCCCAACCCCCCGGCCCCCGCGCCCGCCATGCAGAACCCTTCTCTGAACGCGACTTCCACGCCGATGGGCATACACAGGAGGTCGTCCGATTCGGATCTCAGTGTTACGCCTAAAGGTGGTTCGTTAAACACATCGGCGGGTAATGTGGGCAGCGGAGGAGGCGCCATCTTGCGGCCTTCGATGAACAGCAACAACTTGGACATGCTGGAGTATCCCTTTCTCACCATGACGGAGTTCCCGCCTGGCTTCATTGTGCACATCGGCGGCACGGTGTGCGCCCGCTCCGTGAAGCTGGCGGAGGGCGGCGGCGAGGGCGCGTGGGCCGAGCTGCGCACGGAGCTGCGGGCGCACGCGCGCGCGCTGCGCTGCAACGCGGTCATCGCCTACTCCGACAGTGCCGCCATCTGTGAAGATGTGTGCGTCCTGTCAGCGTCGGGTACAGCGGCCGTCATCAATTTGGACTGCGATTACAACGTGGAGTGTGAACAGACGCCAGCGCAGAGCGGTCCGAAGGGCGGCGCGGAGGCGGACGCGTGCTCGGCGGCGCACGTGCCCTACGCGCCCGGCTCCGGGCCCTACCGCGCCGAGCTGTCCCTGTGCGCGCAGTGCAGGCGCGCCCGGGTGCCGTCGGTGCTGCTGGCCACGTGCGCCAAGCCCAGCACCATGCCCACGCACGGCAAAGCCGTCACGTTGACTGCTGTAGCGGCGCGCGTGCGGAGGGCGCCCCCCACGGCGGAGCCCGGCGCCAGGGACATATCGGATCAGCTACCCTTCTTAGAGTACGAGCTGCACAAGCTGCTGTTAGCCAAACTGAGGATGCAGGGTGCCAACGCGCTGTTCTCGCTGTGCACGCGCGTGGCGGTGGGCGAGCGCTGCGTGGTGGCGCTGGCCAGCGGGGCCGCGTACCGCCTGCGCGCGCTGCCGCCCCCCGCACCCCCCGCGCTCAAGGCCTCAGAAAGTGACCGGGACGCGACTGAGATACAGAGGGCTCTCCGGGACGCGTTCAACGCCAACAAGGCCGCCAACGGATACGACGTCGGTGAGCGCCATATTTCTTATTTTTATTTAGCTTTTGGCTTTAGCACGGTTTGTACATTAGCCAGCGTCAAGTAA
Protein
MDELQKLVNILNPKAPSLLDDQIDDDDDKSFELNRKSSVKSYTGNISLYQDQYVSQKSLKHITEDQTDLNRLLNKRDDYDSDSSGPIKKIKKLKTNFFSKRFSVRSRKSEKDADLISLKSNSSDNSRISILDIKNEIKKLKRLKKPKLPKPTANKEEEGEGMASILARSVIHANTSLACIAETHDSEHSPCSTLRRTSESEPTLNLSDDDKTRATSADRNETEETKKVPEIHFTSLTNITSEEIEPTRVRKISESCPTSPVAERTENLLKLPGDPEYFDSVSSALSGESSDIYSSSDEDDESSDLKTDNERSIETTSSVVRSVLNHEVNPAIIAQMGRKLSILENETSDGEEKRNQDLSMKSKSLESVPVEMKSEVKVPIKHEASTSARDLNTSVMKPNTHYIKLHNPFAHKKASKSISAPSSPTEKNSFVNRSSKKIKRQLSKISKSSMIKSLSHYSLLPKKKDEKVTLSHPGSSSNITSKVSTGDTVLGSPFLSYSDLMSLDKVSIATQKAMCKSDDFDPKKVSMYIGSEPESRCSFSGPSSPQHRDDLDHPNINKKEKASLKPTGLLHTAMETILIDRVHSLLIPTSPDPVNSKAKQFFNDVSLKLEQVESSRSLKESNGHLSVPPKTNKAQSLPPESPVYNSVKTKPFLDDFRHSKAKSSESKGLIHTAMETILLDKAQSIIGPVTPEPKTSIHFPNFNKKEKSKPKHCTGLVQTAMQTMLLDTVQSVLLETPEPSPTSLTFEIKDKYDNTETDSNTRDSTGLVHTALETILLDQVQNICAPIEIATNEGSKINQIHNKDAAMSVCETAILKAASDKTDQPKNVLTDEPEKKLEELQSPGLVQMAMETILIDKVQSLLDPNNGAPSKSTDPVKNPNEFTTTHTFAATSTNESNATEKNETEINKENEDSKIEKQVNKPEYEQEVNQDFKSTNTKKLTRQESIHSVTESLKMSNENIANVPHKITKPMLQNFHPILSGVPLETIPSLPESSLDRAESLDVEGVENNDSVGVCGNSHAVCGVGRSERDRDRCDKDKGSPRHARHESYGGRDPPNPPAPAPAMQNPSLNATSTPMGIHRRSSDSDLSVTPKGGSLNTSAGNVGSGGGAILRPSMNSNNLDMLEYPFLTMTEFPPGFIVHIGGTVCARSVKLAEGGGEGAWAELRTELRAHARALRCNAVIAYSDSAAICEDVCVLSASGTAAVINLDCDYNVECEQTPAQSGPKGGAEADACSAAHVPYAPGSGPYRAELSLCAQCRRARVPSVLLATCAKPSTMPTHGKAVTLTAVAARVRRAPPTAEPGARDISDQLPFLEYELHKLLLAKLRMQGANALFSLCTRVAVGERCVVALASGAAYRLRALPPPAPPALKASESDRDATEIQRALRDAFNANKAANGYDVGERHISYFYLAFGFSTVCTLASVK

Summary

Uniprot
H9JKG7   A0A0L7LHG3  
Pubmed
19121390    26227816   
EMBL
BABH01024765    BABH01024766    BABH01024767    BABH01024768    JTDY01001097    KOB74887.1    + More
Proteomes
UP000005204    UP000037510   
PRIDE
H9JKG7   
Pfam
PF00168   C2
Interpro
IPR035439   UPF0145_dom_sf        + More
IPR038983   C2CD5       
IPR035892   C2_domain_sf       
IPR000008   C2_dom       
SUPFAM
SSF117782   SSF117782       
Gene 3D
2.60.40.150    
ProteinModelPortal
H9JKG7   A0A0L7LHG3  

Ontologies

KEGG
101743769    no KO assigned | (RefSeq) C2 domain-containing protein 5
GO
GO:0005544  
PANTHER
PTHR37412  

Topology

Length:
1424
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
2.76127
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00000
outside
1  -  1424
 
 

Population Genetic Test Statistics

Pi
272.755275
Theta
194.848501
Tajima's D
1.322571
CLR
1005.056532
CSRT
0.742362881855907
Interpretation
Uncertain
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