Gene

KWMTBOMO03781

Pre Gene Modal

BGIBMGA010070

Annotation

PREDICTED:_acyl-CoA_synthetase_short-chain_family_member_3?_mitochondrial_[Amyelois_transitella]

Location

Bomo_Chr7(+):1616568-1620277      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.089

CDS

ATGACGTTATTACGAGCGCATTTACAGGTCTCGCGTCTGGCTGGAAAGCTGACAACGTTGGGAGTCAGTAAGGGAGCCCGGGTGCTGATCTACATGCCGCTAGTACCAGAAGCTATTATAGCTATGCTCGCTACCAATCGTATCGGCGCCATTCACTCTGTTGTATTTGGAGGTTTCGCTGCGAGGGAATTAAGAACGAGGATCGAACACGCTGAGCCAACGGTCATCATAGCCGCCAGTTGCGGGGTAGAGCCTAATAAGATCGTCAGGTACAAAGATATTCTGGACGAAGCACTGTGCCAGAGTTCCCATCAGCCTCGCTCCTGCATTATATACCAACGGCGCAGAGTACTAGAGTGTCCCCTTGAAATTGGAAGGGACATATCCTGGGACGAGGGCTTGGAAGCCGACCCGGTACCGTGCGAGTCGGTAGAAGCCAATGAACCCTTGTACATACTATACACATCTGGTGAGTAA

Protein

MTLLRAHLQVSRLAGKLTTLGVSKGARVLIYMPLVPEAIIAMLATNRIGAIHSVVFGGFAARELRTRIEHAEPTVIIAASCGVEPNKIVRYKDILDEALCQSSHQPRSCIIYQRRRVLECPLEIGRDISWDEGLEADPVPCESVEANEPLYILYTSGE

Uniprot

A0A2H1WB48   A0A194QJ38   A0A2A4JJI7   A0A2H1WLP1   A0A437AVV8   A0A212EK82   + More
A0A0N1IP08   A0A023F478   E0VNP8   A0A1W4WT96   A0A0V0G4I1   A0A1B6K2Y4   D7EIL8   A0A1B6EB89   A0A1B6LK32   A0A067RG88   A0A1B6GN44   A0A146M909   N6TPX0   U4TXT0   A0A2J7RPX1   A0A182SQR7   A0A2H8TKG3   A0A1Q3G589   A0A182TME7   A0A1Y1K7K9   A0A182L9B4   A0A2J7RPY6   Q7PXM0   A0A182XA15   A0A182HKZ4   A0A182VMV4   W5JDG8   A0A182FRT0   A0A1S3D6F0   A0A232FFW4   A0A2J7RPX8   Q172S4   A0A1S4FG66   J9JL42   A0A2T7PJI5   A0A182K128   K7J7A7   A0A182PH13   A0A182Q2N8   A0A182VWC3   A0A2H8TTP0   A0A182YBA8   A0A182R522   A0A084WNY1   A0A182JFU4   A0A1J1J332   A0A0P5THT2   A0A3R7MAN3   A0A0P5KG23   B0WZJ8   A0A0N8BC78   A0A1B0AIU7   D3TNZ1   A0A1A9VZN2   A0A1B0FND6   A0A1A9V1W4   A0A1B0C444   A0A2C9JWR1   A0A1B0AWT7   A0A1A9Y4W8   A0A352IZW6   A0A1H6QE25   A0A0P5MAK0   E9FTL0   A0A0P5UZ05   A0A164LZA0   A0A0P5EQN5   A0A0P6JIH7   A0A0P5YKU3   A0A0P5VJ86   K9GP14   S6BT24   A0A0P5TEN0   A0A2A3ELU3   A0A3C0JKN5   A0A077MGW1   A0A088A1V7   A0A2T6NG16   A0A182N9Z9   A0A1V4D1A6   A0A060ZL42   A0A349H7F1   A0A1I8NPE0   A0A421K582   A0A1V6GT50   A0A1E2ZD37   K1PDD7   A0A3R7XF06   A0A1B1AW71   A0A1E2UNL2   A0A0H4X786   A0A091ACF5   A0A0P6CCC8  

Pubmed

26354079    22118469    25474469    20566863    18362917    19820115    + More
24845553    26823975    23537049    28004739    20966253    12364791    14747013    17210077    20920257    23761445    28648823    17510324    20075255    25244985    24438588    20353571    15562597    30148503    21292972    23409257    23924784    23178666    22992520    26900859   

EMBL

ODYU01007475    SOQ50280.1    KQ459167    KPJ03471.1    NWSH01001180    PCG72227.1    + More
ODYU01009142    SOQ53354.1    RSAL01000347    RVE42302.1    AGBW02014315    OWR41886.1    KQ460869    KPJ11786.1    GBBI01002397    JAC16315.1    DS235341    EEB15004.1    GECL01003536    JAP02588.1    GECU01001894    JAT05813.1    KQ971307    EFA12019.1    GEDC01002107    JAS35191.1    GEBQ01015959    JAT24018.1    KK852482    KDR22891.1    GECZ01005901    JAS63868.1    GDHC01003107    JAQ15522.1    APGK01058936    APGK01058937    APGK01058938    KB741292    ENN70351.1    KB631727    ERL85617.1    NEVH01001354    PNF42887.1    GFXV01002811    MBW14616.1    GFDL01000081    JAV34964.1    GEZM01094463    JAV55675.1    PNF42888.1    AAAB01008987    EAA00842.4    APCN01000876    ADMH02001846    ETN60920.1    NNAY01000294    OXU29410.1    PNF42886.1    CH477432    EAT41023.1    ABLF02019017    PZQS01000003    PVD33552.1    AXCN02001521    GFXV01005147    MBW16952.1    ATLV01024779    KE525360    KFB51925.1    CVRI01000066    CRL05878.1    GDIP01127675    JAL76039.1    QCYY01002281    ROT71552.1    GDIQ01210293    JAK41432.1    DS232209    EDS37512.1    GDIQ01192036    GDIQ01192035    JAK59690.1    EZ423143    ADD19419.1    CCAG010023575    JXJN01025270    JXJN01004952    DNNA01000339    HBC36999.1    FNYH01000001    SEI38477.1    GDIQ01170312    JAK81413.1    GL732524    EFX89382.1    GDIP01106638    JAL97076.1    LRGB01003123    KZS04573.1    GDIP01144732    JAJ78670.1    GDIQ01017730    JAN77007.1    GDIP01056389    JAM47326.1    GDIP01099233    JAM04482.1    ANHY01000030    EKV26469.1    AP012978    BAN69174.1    GDIP01128973    JAL74741.1    KZ288215    PBC32677.1    DMFI01000275    HAI97862.1    CAJC01000202    CCI54872.1    QBVD01000044    PUB83760.1    LAKD02000063    OPF76047.1    LK022848    CDR06820.1    DMWQ01000005    HAS85214.1    NATZ01000024    RLW60586.1    MWEI01000012    OQC28971.1    MARB01000011    ODJ87494.1    JH817576    EKC21892.1    QZAC01000160    RQD81245.1    CP016279    ANP50795.1    LVJZ01000003    ODB96279.1    CP012109    AKQ63727.1    JQIE01000231    KFN37733.1    GDIP01017709    JAM86006.1   

Proteomes

UP000053268    UP000218220    UP000283053    UP000007151    UP000053240    UP000009046    + More
UP000192223    UP000007266    UP000027135    UP000019118    UP000030742    UP000235965    UP000075901    UP000075902    UP000075882    UP000007062    UP000076407    UP000075840    UP000075903    UP000000673    UP000069272    UP000079169    UP000215335    UP000008820    UP000007819    UP000245119    UP000075881    UP000002358    UP000075885    UP000075886    UP000075920    UP000076408    UP000075900    UP000030765    UP000075880    UP000183832    UP000283509    UP000002320    UP000092445    UP000091820    UP000092444    UP000078200    UP000092460    UP000076420    UP000092443    UP000242999    UP000000305    UP000076858    UP000009881    UP000015562    UP000242457    UP000035720    UP000005203    UP000244593    UP000075884    UP000033615    UP000095300    UP000284961    UP000094769    UP000005408    UP000284619    UP000092659    UP000094849    UP000009026   

Pfam

PF00501   AMP-binding        + More
PF16177   ACAS_N
PF13193   AMP-binding_C

Interpro

IPR020845   AMP-binding_CS        + More
IPR032387   ACAS_N       
IPR000873   AMP-dep_Synth/Lig       
IPR042099   AMP-dep_Synthh-like_sf       
IPR025110   AMP-bd_C       
IPR020459   AMP-binding       

Gene 3D

3.40.50.12780    

ProteinModelPortal

A0A2H1WB48   A0A194QJ38   A0A2A4JJI7   A0A2H1WLP1   A0A437AVV8   A0A212EK82   + More
A0A0N1IP08   A0A023F478   E0VNP8   A0A1W4WT96   A0A0V0G4I1   A0A1B6K2Y4   D7EIL8   A0A1B6EB89   A0A1B6LK32   A0A067RG88   A0A1B6GN44   A0A146M909   N6TPX0   U4TXT0   A0A2J7RPX1   A0A182SQR7   A0A2H8TKG3   A0A1Q3G589   A0A182TME7   A0A1Y1K7K9   A0A182L9B4   A0A2J7RPY6   Q7PXM0   A0A182XA15   A0A182HKZ4   A0A182VMV4   W5JDG8   A0A182FRT0   A0A1S3D6F0   A0A232FFW4   A0A2J7RPX8   Q172S4   A0A1S4FG66   J9JL42   A0A2T7PJI5   A0A182K128   K7J7A7   A0A182PH13   A0A182Q2N8   A0A182VWC3   A0A2H8TTP0   A0A182YBA8   A0A182R522   A0A084WNY1   A0A182JFU4   A0A1J1J332   A0A0P5THT2   A0A3R7MAN3   A0A0P5KG23   B0WZJ8   A0A0N8BC78   A0A1B0AIU7   D3TNZ1   A0A1A9VZN2   A0A1B0FND6   A0A1A9V1W4   A0A1B0C444   A0A2C9JWR1   A0A1B0AWT7   A0A1A9Y4W8   A0A352IZW6   A0A1H6QE25   A0A0P5MAK0   E9FTL0   A0A0P5UZ05   A0A164LZA0   A0A0P5EQN5   A0A0P6JIH7   A0A0P5YKU3   A0A0P5VJ86   K9GP14   S6BT24   A0A0P5TEN0   A0A2A3ELU3   A0A3C0JKN5   A0A077MGW1   A0A088A1V7   A0A2T6NG16   A0A182N9Z9   A0A1V4D1A6   A0A060ZL42   A0A349H7F1   A0A1I8NPE0   A0A421K582   A0A1V6GT50   A0A1E2ZD37   K1PDD7   A0A3R7XF06   A0A1B1AW71   A0A1E2UNL2   A0A0H4X786   A0A091ACF5   A0A0P6CCC8  

PDB

5GXD     E-value=1.3867e-41,     Score=421

KEGG

101743386    K01908 propionyl-CoA synthetase [EC:6.2.1.17] | (RefSeq) acyl-CoA synthetase short-chain family memb

GO

GO:0003824   GO:0003987   GO:0016021   GO:0050218   GO:0016874   GO:0008152   GO:0030136   GO:0030276   GO:0048268   GO:0000049   GO:0004812   GO:0043039   GO:0042555   GO:0048384  

Length:

158

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

9.7623

Exp number, first 60 AAs:

9.65456

Total prob of N-in:

0.18956

outside

1  -  158

 

 

Pi

276.982873

Theta

166.95449

Tajima's D

2.111156

CLR

0

CSRT

0.897755112244388

Interpretation

Uncertain