SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03767
Pre Gene Modal
BGIBMGA010060
Annotation
Serine_protease_2?_partial_[Operophtera_brumata]
Location in the cell
Extracellular   Reliability : 1.532 PlasmaMembrane   Reliability : 1.683
 

Sequence

CDS
ATGCGGATACTAGCCCTGGTGATTTTTGTTGGCATAGCCTCAGCTGAAGGAACCCGCATTGTTGGCGGAGACCCCACTACCATCGACAAATACCCGTCGATAGTTCAAGTGGATGGTCTGGGATTCTTCTCGGGAGTATGGGGCCAGATCTGCGCTGCCAATATCCTCAACGTCTTGTATGTCCTGTCAGCTGCACACTGCTTTCTTGGAGCGTAA
Protein
MRILALVIFVGIASAEGTRIVGGDPTTIDKYPSIVQVDGLGFFSGVWGQICAANILNVLYVLSAAHCFLGA

Summary

Similarity
Belongs to the peptidase S1 family.
EMBL
BABH01024724    JTDY01017323    KOB51855.1    KQ459167    KPJ03461.1    JTDY01004416    + More
KOB68185.1    KR024671    ALE15213.1    JTDY01003642    KOB69233.1    KQ460409    KPJ14945.1    FJ205440    ACR16004.1    AGBW02012089    OWR45697.1    AM690450    CAM84320.1    EF531638    ABR88249.1    NWSH01000631    PCG75148.1    ODYU01002467    SOQ39998.1    SOQ39997.1    AY513650    AAR98919.1    ODYU01006115    SOQ47675.1    RSAL01000013    RVE53438.1    EF600053    KZ150010    ABU98618.1    PZC75086.1    PCG75146.1    KPJ03460.1    EU325549    ACB54939.1    PZC75088.1    GDQN01009270    JAT81784.1    GDQN01006776    JAT84278.1    AY953066    AAX62039.1    PZC75083.1    EU673451    ACI45414.1    MF407319    AWL83215.1    AY953065    AAX62038.1    AY953064    AY953068    AAX62037.1    AAX63384.1    JN793549    AFO68329.1    SOQ39996.1    PCG75152.1    KPJ03459.1    SOQ39999.1    AF173497    AAF24227.1    AF173498    AAF24228.1    RSAL01004588    RVE40122.1    JN793548    AFO68328.1    FJ205419    ADM35106.1    PZC75087.1    EF600059    ABU98624.1    PCG75147.1    RVE53439.1    GDQN01011173    GDQN01002795    JAT79881.1    JAT88259.1    FJ205433    ACR15999.2    JQ904129    AFM77759.1    KPJ03458.1    HM535626    ADK66277.1    RSAL01000347    RVE42309.1    SOQ47674.1    ODYU01007983    SOQ51222.1    AY587153    AAT95345.1    AY587156    AAT95348.1    AY587155    AAT95347.1    KPJ03462.1    KR024672    ALE15214.1    AY587148    AAT95340.1    AY587149    AAT95341.1    KPJ14944.1    ODYU01000133    SOQ34398.1    AY587144    AAT95359.1    KPJ03463.1    KPJ14943.1    AY587143    AAT95358.1    KM083776    AIR09757.1    EU673450    ACI45413.1    KY379952    APS85762.1    ODYU01002707    SOQ40553.1    ODYU01007266    SOQ49892.1    ODYU01002419    SOQ39873.1    KQ458883    KPJ04582.1    AF261970    AAF74732.1    HM990184    ADT80832.1    JTDY01001149    KOB74739.1    RSAL01000077    RVE48787.1    MF407317    AWL83213.1    EF531632    ABR88243.1    JX312360    AFQ59994.1    KM360188    AKH49604.1    Y12269    KZ150104    CAA72948.1    PZC73449.1    EF104916    Y12271    ABP96918.1    CAA72950.1    JX195649    AFQ37932.1    EF531631    EF531633    ABR88242.1    ABR88244.1    JN793543    AFO68323.1    JX195651    AFQ37934.1    JX195652    AFQ37935.1    JN793542    AFO68322.1    AF237416    AAF43708.1    JN793545    AFO68325.1    BABH01007520    RSAL01000038    RVE51122.1    KZ150631    PZC70433.1    FJ205428    ACR15995.1    AF261971    AF261990    AAF74733.1    ODYU01011017    SOQ56495.1    KQ459933    KPJ19289.1    AY587163    AAT95355.1    NWSH01000106    PCG79486.1    AY587164    AAT95356.1   
Pfam
PF00089   Trypsin        + More
PF01365   RYDR_ITPR
PF02815   MIR
PF00520   Ion_trans
PF08709   Ins145_P3_rec
PF08454   RIH_assoc
Interpro
IPR009003   Peptidase_S1_PA        + More
IPR001254   Trypsin_dom       
IPR018114   TRYPSIN_HIS       
IPR033116   TRYPSIN_SER       
IPR001314   Peptidase_S1A       
IPR012224   Pept_S1A_FX       
IPR013662   RIH_assoc-dom       
IPR000699   RIH_dom       
IPR014821   Ins145_P3_rcpt       
IPR036300   MIR_dom_sf       
IPR035910   RyR/IP3R_RIH_dom_sf       
IPR005821   Ion_trans_dom       
IPR000493   InsP3_rcpt       
IPR016093   MIR_motif       
SUPFAM
SSF50494   SSF50494        + More
SSF82109   SSF82109       
SSF100909   SSF100909       
PDB
4LK4     E-value=0.00853474,     Score=85

Ontologies

Topology

SignalP
Position:   1 - 15,         Likelihood:  0.995133
 
 
Length:
71
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
29.20983
Exp number, first 60 AAs:
25.35882
Total prob of N-in:
0.62502
POSSIBLE N-term signal
sequence
outside
1  -  71
 
 

Population Genetic Test Statistics

Pi
62.241374
Theta
74.415226
Tajima's D
-0.282368
CLR
0
CSRT
0.297685115744213
Interpretation
Uncertain
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号