Gene

KWMTBOMO03766

Pre Gene Modal

BGIBMGA010059

Annotation

transient_receptor_potential_channel_pyrexia-like_[Bombyx_mori]

Location

Bomo_Chr7(+):1333118-1336812      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.057

CDS

ATGGACAACTTCGGGTATCGCGAGATGGGGTGGCCTTCACCCTTGCAAACTCCAACAAGATCACGATTAAGCAGCAGCATTCGATCCAGAGGGCGGGAGCCTGAAGAATTTCCACTCAATCCTCAATATAAGCACGTGAAAAACATCGATTTGCTGGAGTCAGCTCGTGAGCCGGGAAAAGCTAAGGAGTACCTTTTCGTCGGACCTTCACCTCCAGCTGACGATGCACCGAACATGTACCACAGTTTCGACGTCCTCGCTCCCGACCCCGATGCTAGATTGACCGATGACGCGGCAAGAAGAGGATTGTACGAAAGAGCCCTCACTCTGGGGGCGGGAAGATTTTTCGATGACTTAGAATGCGGCTTGATAACTGCCGAAAACATCGAGGAACACATTAGTTCTGCTCCTGAAGCGGTCGTAAATTTAACTTTACTATGGGCCTCGTATTTGGCGCGGGATGAGTTATTACCCGGAGTTTTGGACGCTGGGGCGGATATTCACTACTCGGATTCGTCAGGTTTGACTGCCTTACATTTGTCAGCCTTTAGCGGTGCCGGCAGAGCGGCTGTGTTCCTGATATCACGGGGTGCTGACGTCGATTTCGTTCCTAAATATTTCACCCCCCTTCATTGTGCCGCATTCGGGAATTCGTTAGAAGTTGCAGAAATACTGATAGCAAATGGCGCTTCGTTACACGGCGTGGTACAGCGAGCAGGATGCGAAGATAACCTAGTACATTGCGCGGTGAGAGCAGATGCCGTTGAATGTATGGAAATGTTCATAGAACGAGGAGTGGACCCCGCATATGCTACTTCTGGAGGATTGAACGCGTTGCATCTCGCTGCTGAGCTGGGTTCGCGACGTTGCTTGTCGTATTTATTAAGAGAAACAAAGATAAGCGTGAATGGCATGAGTAAACAAAGAGATAAAGAATGTACTGCGTTGCACTTGGCAGCTTCCAGGGGCTATGTGGAGTGCGTAGAACTTTTACTATCTGAAGGTGCGAAAGCAAACACGAAAAATTATAGAGGATTCACGGCCTTACATCTAGCTGCTAGATTATCAAGTATCGACTGCGTAGAAGTGTTGTTGCGAGACGGCAACGCGGACCCGAATGCTGAAGATTACGACAAAAGAAGTCCTTTACACGCTGCGATAACTCGTTCCGAACGTGCTTGTGATATAATCGAACTGCTGGTTAATTGGGGAGCTCAGGTCAACAAGAAAGATGAATATGGGTATTCTGCAATTCATTTAGCTGCAATGGATGGTTTGACGCAATGCGTCGAAACATTAATCTTTCTGGGCGCCGACGTAACTTCGAAATCTAAAAAAGGTCACACAGCGTTAAGTGTTATCGCCAGGAAAACTCCTAAGTCTCTTGCTATTTTAAAACACAACCTAGATTGTGGAATATCATTGAGTCGATCAATAGAAGGCAACGAAGAGGTACAGATCGAATTTGATTTTGCGGTAGTCAAAGCGTGTCAAGGTAAGCATTCGAAGAAATATGGTGTCCCAAATGAATTATGTCAGCCGCAATCAATTTTGGGAGTCATTTTAAACGATAATCCTATCGAATTTGAGAGATGGGTCTTGATGGCAATCACAGTCTTCGAAATCGTTCGAAAATTAACCGGTATAACCGGATACTCGAGTTTCTACCAATATTTTACGACCTTCGAAAACTTGATGGAGTGGTTCGTGCTGCTCTCAGTATTTTCATTGTACAACATTCGCAATGATTACAGCTGGCAGAATCATGTTGGTGGCTATGCTGTTCTTGGGGCTTGGACAAACTTGATGTTGATGATGGGCCAGCTTCCAATGTTTGGCGATTACGTGGCCATGTATCAAAAAGTTTTAATGGAGTTTCTGAAACTTTTATTGGCTTACATTTGTCTACTTCTCGGCTTTACCATTTGCTTCTGTGTCGTCTTTCCTAATGAAGAAATGTTTTCAAATCCTTTGATGGGTTTCATCAGTACTCTTTCGATGATGGTTGGAGAATTAAATTTAAATATCCTAATAAACGATCCGATGCAAGATGATCCTCCTATATTTTTCGAATTGTCAGCACAAATAATTTTCATTTTCTTCCTTATGTTCGTGACTATAATCCTAATGAATCTATTAGTCGGTATTGCGGTTCACGACATCCAAGGATTAAGGAAGACAGCAGGATTATCAAAATTGGTGCGACAGACGAAACTAATTCTTTTTGTTGAAATGGGCATGTTTAGTGCTTGGCTGCCGAAATGCCTACACAAATATGTCTACAGAACAGCTTTAGTATCTCCTGAGGCCGGCAAAGTCATATTAAGCGTGAAACCGTTGAATCCAAGAGAAAAACGTTTACCAACAGACATTATGATGGCAGCTTATGAATTAGCCCAGCTGAACAAAGTTAAGTCCGGCCGATCAGTTAAAGAAGTGCTATACAAGAACAAGATCTCCTCAAAGTTGAAGAACGAAGGACATAATAATGAGCAGAACGTCGGCTTTGAGATTCGAGGAATGCAAGAGAAGATTGACCAAGCGACGTTTAACTTGAAGAAAATAGACCAGGAGATGCGACATTTGAATACTCTTTTAATGGAACAGCAAAATTTCTTTCAAAGTCTCTTCAAGAGCACAGAATTGGTTCCGTACAAATCCCAGCATGCTTCTACCCCAGTTTATTCAGATTCCCCTATCATCTTTGGCAACAATACGTAG

Protein

MDNFGYREMGWPSPLQTPTRSRLSSSIRSRGREPEEFPLNPQYKHVKNIDLLESAREPGKAKEYLFVGPSPPADDAPNMYHSFDVLAPDPDARLTDDAARRGLYERALTLGAGRFFDDLECGLITAENIEEHISSAPEAVVNLTLLWASYLARDELLPGVLDAGADIHYSDSSGLTALHLSAFSGAGRAAVFLISRGADVDFVPKYFTPLHCAAFGNSLEVAEILIANGASLHGVVQRAGCEDNLVHCAVRADAVECMEMFIERGVDPAYATSGGLNALHLAAELGSRRCLSYLLRETKISVNGMSKQRDKECTALHLAASRGYVECVELLLSEGAKANTKNYRGFTALHLAARLSSIDCVEVLLRDGNADPNAEDYDKRSPLHAAITRSERACDIIELLVNWGAQVNKKDEYGYSAIHLAAMDGLTQCVETLIFLGADVTSKSKKGHTALSVIARKTPKSLAILKHNLDCGISLSRSIEGNEEVQIEFDFAVVKACQGKHSKKYGVPNELCQPQSILGVILNDNPIEFERWVLMAITVFEIVRKLTGITGYSSFYQYFTTFENLMEWFVLLSVFSLYNIRNDYSWQNHVGGYAVLGAWTNLMLMMGQLPMFGDYVAMYQKVLMEFLKLLLAYICLLLGFTICFCVVFPNEEMFSNPLMGFISTLSMMVGELNLNILINDPMQDDPPIFFELSAQIIFIFFLMFVTIILMNLLVGIAVHDIQGLRKTAGLSKLVRQTKLILFVEMGMFSAWLPKCLHKYVYRTALVSPEAGKVILSVKPLNPREKRLPTDIMMAAYELAQLNKVKSGRSVKEVLYKNKISSKLKNEGHNNEQNVGFEIRGMQEKIDQATFNLKKIDQEMRHLNTLLMEQQNFFQSLFKSTELVPYKSQHASTPVYSDSPIIFGNNT

Similarity

Belongs to the transient receptor (TC 1.A.4) family.

Uniprot

H9JKK8   W8VT49   A0A0L7KV80   A0A212EW34   A0A0N1PGH9   A0A194QDC0   + More
A0A2W1BQS4   A0A2A4JSX4   A0A212EY44   A0A0N1INX4   A0A194QDF8   A0A2A4J425   A0A2H1VVM8   W8VYR7   H9JKH6   A0A2W1BN88   A0A0L7KRS9   A0A182FIN2   W5JSU2   A0A084VFU2   A0A182IYC8   A0A1W4XF69   A0A1J1IHM1   A0A182F493   B5X0K8   A0A1J1IG66   A0A1W4VYY7   Q6NQV8   B3NYS8   Q9VHY7   B4R0A9   B4I4Y3   A0A2M4CRT3   A0A2M4ACA0   A0A084W5L3   A0A1W4VZM1   A0A2M4CRM4   A0A2M4ACK1   A0A0B4LGT2   B4PRD7   A0A0R1E1C4   A0A182QEN6   A0A182JF65   A0A0R1E1Q9   A0A182N8V8   A0A1Y1KNZ5   A0A1S4H4F7   Q7Q0M1   A0A182XRE9   A0A182IGN3   A0A182S7D4   A0A182VST2   A0A182MKC6   A0A182RAE2   A0A182YN03   A0A182JSA4   A0A182MF93   A0A139WKY6   A0A182R283   A0A182W659   A0A182VHX2   Q7QF89   A0A182KA14   A0A182WTJ0   A0A182UKQ4   A0A182IAZ3   A0A182N0Q4   A0A182S924   A0A182QYF5   A0A182PBH5   A0A182YF07   A0A1L8DK70   A0A0T6B2H6   N6TX17   U4U6Z5   A0A2M4AF87   A0A067RHV7   B0WRI4   A0A1B6LIV3   A0A1Q3F007   A0A1B6F4A2   A0A1B6JM30   A0A182PPV1   T1H7Z3   A0A023EXA0   A0A067QUF4   A0A0K8TDM4   A0A0C9QZ02   A0A0C9QQC9  

Pubmed

19121390    24639527    26227816    22118469    26354079    28756777    + More
20920257    23761445    24438588    17994087    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    28004739    12364791    25244985    18362917    19820115    14747013    17210077    23537049    24845553    25474469    26823975   

EMBL

BABH01024724    AB703647    BAO53212.1    JTDY01005497    KOB66934.1    AGBW02012089    + More
OWR45696.1    KQ460409    KPJ14946.1    KQ459167    KPJ03457.1    KZ150010    PZC75090.1    NWSH01000631    PCG75145.1    AGBW02011619    OWR46419.1    KQ460938    KPJ10658.1    KPJ03454.1    NWSH01003455    PCG66264.1    ODYU01004410    SOQ44254.1    AB437369    BAO53210.1    BABH01024703    PZC75094.1    JTDY01006675    KOB65795.1    ADMH02000465    ETN66368.1    ATLV01012463    KE524793    KFB36836.1    CVRI01000047    CRK98534.1    BT044577    ACI16539.1    CRK98532.1    BT010330    AAQ55961.1    CH954181    EDV48191.1    AE014297    BT003789    AAF54159.2    AAF54160.2    AAO41472.1    AAS65124.1    CM000364    EDX12034.1    CH480821    EDW55276.1    GGFL01003807    MBW67985.1    GGFK01005095    MBW38416.1    ATLV01020673    KE525304    KFB45507.1    GGFL01003806    MBW67984.1    GGFK01005204    MBW38525.1    AHN57213.1    CM000160    EDW96325.1    KRK03078.1    AXCN02001867    KRK03077.1    GEZM01081070    JAV61910.1    AAAB01008980    EAA13954.3    APCN01005275    AXCM01002492    AXCM01003740    KQ971323    KYB28553.1    AAAB01008846    EAA06325.5    APCN01001381    AXCN02001398    GFDF01007248    JAV06836.1    LJIG01016189    KRT81349.1    APGK01051763    APGK01051764    APGK01051765    KB741205    ENN72936.1    KB631811    ERL86356.1    GGFK01006123    MBW39444.1    KK852498    KDR22603.1    DS232056    EDS33382.1    GEBQ01016361    GEBQ01004306    JAT23616.1    JAT35671.1    GFDL01014150    JAV20895.1    GECZ01024751    JAS45018.1    GECU01007418    JAT00289.1    ACPB03012378    GBBI01004900    JAC13812.1    KK852942    KDR13512.1    GBRD01002148    GDHC01003903    JAG63673.1    JAQ14726.1    GBYB01005912    JAG75679.1    GBYB01005909    JAG75676.1   

Proteomes

UP000005204    UP000037510    UP000007151    UP000053240    UP000053268    UP000218220    + More
UP000069272    UP000000673    UP000030765    UP000075880    UP000192223    UP000183832    UP000192221    UP000008711    UP000000803    UP000000304    UP000001292    UP000002282    UP000075886    UP000075884    UP000007062    UP000076407    UP000075840    UP000075901    UP000075920    UP000075883    UP000075900    UP000076408    UP000075881    UP000007266    UP000075903    UP000075902    UP000075885    UP000019118    UP000030742    UP000027135    UP000002320    UP000015103   

PRIDE

H9JKK8    W8VT49    W8VYR7    H9JKH6    B5X0K8    Q6NQV8    + More
Q9VHY7   

Pfam

PF00023   Ank        + More
PF00520   Ion_trans
PF12796   Ank_2
PF00380   Ribosomal_S9
PF13606   Ank_3

Interpro

IPR005821   Ion_trans_dom        + More
IPR036770   Ankyrin_rpt-contain_sf       
IPR020683   Ankyrin_rpt-contain_dom       
IPR002110   Ankyrin_rpt       
IPR014721   Ribosomal_S5_D2-typ_fold_subgr       
IPR000754   Ribosomal_S9       
IPR020568   Ribosomal_S5_D2-typ_fold       

SUPFAM

SSF48403   SSF48403        + More
SSF54211   SSF54211       

Gene 3D

1.25.40.20     3.30.230.10    

CDD

cd00204  ANK

ProteinModelPortal

H9JKK8   W8VT49   A0A0L7KV80   A0A212EW34   A0A0N1PGH9   A0A194QDC0   + More
A0A2W1BQS4   A0A2A4JSX4   A0A212EY44   A0A0N1INX4   A0A194QDF8   A0A2A4J425   A0A2H1VVM8   W8VYR7   H9JKH6   A0A2W1BN88   A0A0L7KRS9   A0A182FIN2   W5JSU2   A0A084VFU2   A0A182IYC8   A0A1W4XF69   A0A1J1IHM1   A0A182F493   B5X0K8   A0A1J1IG66   A0A1W4VYY7   Q6NQV8   B3NYS8   Q9VHY7   B4R0A9   B4I4Y3   A0A2M4CRT3   A0A2M4ACA0   A0A084W5L3   A0A1W4VZM1   A0A2M4CRM4   A0A2M4ACK1   A0A0B4LGT2   B4PRD7   A0A0R1E1C4   A0A182QEN6   A0A182JF65   A0A0R1E1Q9   A0A182N8V8   A0A1Y1KNZ5   A0A1S4H4F7   Q7Q0M1   A0A182XRE9   A0A182IGN3   A0A182S7D4   A0A182VST2   A0A182MKC6   A0A182RAE2   A0A182YN03   A0A182JSA4   A0A182MF93   A0A139WKY6   A0A182R283   A0A182W659   A0A182VHX2   Q7QF89   A0A182KA14   A0A182WTJ0   A0A182UKQ4   A0A182IAZ3   A0A182N0Q4   A0A182S924   A0A182QYF5   A0A182PBH5   A0A182YF07   A0A1L8DK70   A0A0T6B2H6   N6TX17   U4U6Z5   A0A2M4AF87   A0A067RHV7   B0WRI4   A0A1B6LIV3   A0A1Q3F007   A0A1B6F4A2   A0A1B6JM30   A0A182PPV1   T1H7Z3   A0A023EXA0   A0A067QUF4   A0A0K8TDM4   A0A0C9QZ02   A0A0C9QQC9  

PDB

6MOL     E-value=5.61877e-37,     Score=390

KEGG

101742191    no KO assigned | (RefSeq) trpA4; transient receptor potential channel pyrexia-like

GO

GO:0016021   GO:0005216   GO:0003735   GO:0006412   GO:0005840   GO:0009270   GO:0034703   GO:0005262   GO:0006816   GO:0007605   GO:0006812   GO:0005261   GO:0005515   GO:0006811   GO:0016020   GO:0007155   GO:0000049   GO:0004812   GO:0043039   GO:0042555   GO:0048384   GO:0055085  

Length:

906

Number of predicted TMHs:

5

Exp number of AAs in TMHs:

114.16498

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00241

outside

1  -  554

TMhelix

555  -  577

inside

578  -  589

TMhelix

590  -  612

outside

613  -  626

TMhelix

627  -  649

inside

650  -  653

TMhelix

654  -  676

outside

677  -  695

TMhelix

696  -  718

inside

719  -  906

 

 

Pi

181.033771

Theta

177.458795

Tajima's D

0.050751

CLR

1.827332

CSRT

0.380080995950203

Interpretation

Uncertain