Gene

KWMTBOMO03763

Pre Gene Modal

BGIBMGA010027

Annotation

transient_receptor_potential_channel_pyrexia_[Bombyx_mori]

Location

Bomo_Chr7(-):1082314-1085528      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.133

CDS

ATGCCGAACACGCGTCGTCTGTTGCCCGCGCGGTGGTTGCGAGCTCGCGCGCCCGATGAGCCGCGGCCCGCGGACCGGCGCGGGCGGGACCTGCCCGACCACGAGTCCCTCGAGCGCGCCTACCCCTCCATGGGGCACCTCGAGTACGTGCTGGCCGGCTCCTCGCCGCCGGCCGAGAGCGCACCCAATATGTACGACAGCTTCGAGGAGCCACCTCTGGACCTGACCGCGCACATCTGTGCCGACTCACTGCGTCAGAGCGCCCACGAGCAAATGCGAGCCGTCGGCGGGCGGTTGCGCCTCCTTGATGAGCTCGAGAGTGGAGTCATTCCAGCTGACGCGACGACTGACGCCTTCGCGACCGCCACCGATGCCGAAAAGAACGTCTGCTTATTTTGGACCGCGTTTTTGAAACTCGCCAACTTGCTACCACCGCTGATTGAGGTTGGGGCGGACCCCCTGTACTACGACTCTCTGGGCCTGTCTCCGCTGCACGTGGCCGCGTTCAGTGGTTCCGTAGAATGCGCCAGTTATCTGCTGTCGTGCGGCGCGGACCCTAATTATATGCCCCGGTGTTTTGCGCCGCTTCACTGTGCCGCATTCGGTAACTCGGTACAAGTGGCTAATTTGCTAATAGCTCGCGGTGCGTCCGTGCACGCGGCTGTAAAGTACATCAATTGCGAAGGAGGTCTCCTTCACTGTGCGGTGCGAGCTAATTCCGCGGAGTGCCTCAAATTGTTTATATCGCACGGAGTTGACGTGAACTTGATCGAGCCGGGCGGTACTAATGCCATTCACCTCGCCGCTGATTTGGGCGTTAAACAGTGTCTTATAATATTGCTTGACACGCCCGGAGCCGACCCTAATGTTAGAACAAGAGTAGGGGACAGAGAATCCACCGCTTTGCATTTAGCCGCCGACGGTGGCTTTGTTGAGTGTGTCGATTTGTTACTCAGCAAAGGTGCAGATGCGAGTTTGAAGAATCATAGGGGGTTCACAGCGTTACATTTGGCAGCTCGGTCTGCGAGTTTAGAATGCGTGGAATCCTTACTCCGGAAAGGCAATGCCGACCCCAACGCTATGGATTTTGATAAACGAACACCGCTACATGCAGCTATCGGAAAATCGGATTCCGCTTGTGATATCATCGAAACCTTAATCAGTTGGGGCGCCAACGTAAACCAAAAAGATGAATACGGATTTACTCCACTGCACCTAGCCGCACTTGACGGACTGTCGGCCTGCGTGGAGACCTTGATATATCACGGTGCTGACGTCACAACGAGATCTAAGAAGGGAAACTCGGCCCTTAATGTAATCGCTAGAAAAACGCCCGCTTCACTCGCGATGGTAACTAGAAAATTGGACTGCGCCATTACTCTACATCACTCGCAGTCGAGCAATAGAGAAGTTGAATTGGAGCTTGATTTTCGTAGCATATTGCAGCATTGTTATCCGCGAGAGATCAGCTATTTGAATACGTTCGTCGACGAAGGCCAAAAAGAAGTCCTACTTCACCCACTGTGCTCGGCCTTTCTGTACATTAAATGGGAGAAAATACCACTCGCGCACAATTGTTATAACGGTAGCAAGGACATGGAGGAGACAATACAAGAGCAGGAGTTGTGTCAAAAGCAATCCATCCTTGGTGACCTATTAAGGAAAAATCCATTCGTAATTGAAATGCAATGGTGGGTTCTAGCCGGGATAACGATATTTGAGATATTTAGGAAGGTATACGGGATCGCTGGATATTCGACCGTCAAACAGTATTTGATGCAATCGGAGAACATTATTGAGTGGTTCGTGATCATTAGTGTTTTCCTAATTTCGTATATATACACAAACATCACGTATACATGGCAGAACCACGTCGGCGCTTTCGCGGTGCTCGCTGGGTGGACGAACCTCATGATGATGATCGGACAGCTACCCGTTTTCGGCACCTACGTCGCGATGTACCAAAAAGTACAAAAGGAATTTGCCAAATTGCTTATGGCCTATTCGTGTATCCTAATCGGTTTCACGATAAGTTTCTGCGTTATCTTCCCGGACTCGTCCTCGTTTGCGAATCCGTTTATGGGCTTCATAACCGTCTTGACAATGATGATCGGGGAGCTAAATTTAGATTTACTACTCAACGAGCCAGATGGAAACGACCCTCCTGTCTTGCTCGAGTTTTCTGCGCAGATAACCTACGTGTTATTCCTAATGTTTGTTACGGTCGTATTGATGAATTTACTGGTCGGCATAGCGGTCCACGATATTCAGGGTTTGAGGAAAACCGCTGGCCTTTCAAAGCTGGTTCGACAAACCAAACTGATATCTTACATGGAATTGGCGTTGTTCAATGGATATTTACCGAAATGTCTACTAAAGATACTACATTCTTCAGCTTTGGTTTCGCCCCAGGCCTACAGGGTTGTGCTAAGCGTCAAACCGTTGAACCCAAGCGAGAAGAGACTGCCTAGGGACATAATGATGGCCGCTTACGACATAGCAAAGATGCGGAAGCAATACGGACACACTATATCATCGAGCGGTTCGACAACGGGCGCCTATTCATGCTTCAAAAAGTACGAGAGCAATAACGACTCCGGGTACCGAGAATACGGTTACTCAGGACTCGGAAGCATCCACGCCAGACTCGACGAGACATCGGAACACGTCAGACAATTGACACAGGAAGTCAAGGAATTGAAGAAGCTAATAAACGCGCAGCAACTTGTCATTCAGCAAGCGCTGGTCGGCGCGATGGACCGTCCGTGA

Protein

MPNTRRLLPARWLRARAPDEPRPADRRGRDLPDHESLERAYPSMGHLEYVLAGSSPPAESAPNMYDSFEEPPLDLTAHICADSLRQSAHEQMRAVGGRLRLLDELESGVIPADATTDAFATATDAEKNVCLFWTAFLKLANLLPPLIEVGADPLYYDSLGLSPLHVAAFSGSVECASYLLSCGADPNYMPRCFAPLHCAAFGNSVQVANLLIARGASVHAAVKYINCEGGLLHCAVRANSAECLKLFISHGVDVNLIEPGGTNAIHLAADLGVKQCLIILLDTPGADPNVRTRVGDRESTALHLAADGGFVECVDLLLSKGADASLKNHRGFTALHLAARSASLECVESLLRKGNADPNAMDFDKRTPLHAAIGKSDSACDIIETLISWGANVNQKDEYGFTPLHLAALDGLSACVETLIYHGADVTTRSKKGNSALNVIARKTPASLAMVTRKLDCAITLHHSQSSNREVELELDFRSILQHCYPREISYLNTFVDEGQKEVLLHPLCSAFLYIKWEKIPLAHNCYNGSKDMEETIQEQELCQKQSILGDLLRKNPFVIEMQWWVLAGITIFEIFRKVYGIAGYSTVKQYLMQSENIIEWFVIISVFLISYIYTNITYTWQNHVGAFAVLAGWTNLMMMIGQLPVFGTYVAMYQKVQKEFAKLLMAYSCILIGFTISFCVIFPDSSSFANPFMGFITVLTMMIGELNLDLLLNEPDGNDPPVLLEFSAQITYVLFLMFVTVVLMNLLVGIAVHDIQGLRKTAGLSKLVRQTKLISYMELALFNGYLPKCLLKILHSSALVSPQAYRVVLSVKPLNPSEKRLPRDIMMAAYDIAKMRKQYGHTISSSGSTTGAYSCFKKYESNNDSGYREYGYSGLGSIHARLDETSEHVRQLTQEVKELKKLINAQQLVIQQALVGAMDRP

Similarity

Belongs to the transient receptor (TC 1.A.4) family.

Uniprot

H9JKH6   W8VYR7   A0A212EY44   A0A0N1INX4   A0A2A4J425   A0A2H1VVM8   + More
A0A2W1BN88   A0A194QDF8   A0A0L7KRS9   A0A0L0CKM1   A0A0A1WRK9   A0A0A1WL94   A0A1A9WFM6   A0A1B0FNB9   A0A1A9YI35   A0A1A9Z6J3   B4K7I8   W8BFL5   A0A034W680   A0A0Q9XA97   A0A0K8VD15   A0A034W4P9   A0A1B0GQ57   A0A1B0BY82   A0A1I8MKT5   A0A3B0KG84   A0A3B0K7L8   A0A1I8PRH0   A0A1I8MKS7   A0A0R3NJS7   B4GMX9   A0A1I8PRL8   A0A1I8MKT1   Q294L4   A0A3B0JSR8   A0A3B0JUI7   A0A0R3NJU9   A0A0R3NJP8   I5APS4   A0A1I8PRL4   A0A336LYY4   A0A0M4EH70   B4N8D0   A0A1B0GJI4   B4JI37   B4M0V1   A0A0Q9WUI7   A0A0Q9WSR2   A0A0Q9WIQ4   B3LXF7   A0A0P9C947   A0A0P8YEQ8   B4R0A9   B4I4Y3   B5X0K8   Q9VHY7   Q6NQV8   B3NYS8   B4PRD7   A0A0B4LGT2   A0A0R1E1C4   A0A0R1E1Q9   A0A1W4VYY7   A0A1W4VZM1   A0A1B0CSF7   A0A1B0CSY4   A0A1L8DIW8   A0A1B0GQ56   A0A1L8DIP3   A0A1J1IHM1   A0A1J1IG66   B0WRI4   A0A1Q3F007   A0A182QEN6   A0A182JF65   A0A182N8V8   Q7Q0M1   A0A084W5L3   A0A2M4ACK1   A0A182F493   A0A2M4ACA0   A0A2M4CRT3   A0A2M4CRM4   W5JSU2   A0A1S4H4F7   A0A182IYC8   A0A182FIN2   A0A182N0Q4   A0A084VFU2   A0A182PBH5   A0A182R283   A0A182YF07   A0A182W659   Q7QF89   A0A182MF93   A0A182XRE9   A0A182VHX2   A0A182IGN3   A0A182KA14   A0A182S924  

Pubmed

19121390    24639527    22118469    26354079    28756777    26227816    + More
26108605    25830018    17994087    24495485    25348373    25315136    15632085    23185243    18057021    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    12364791    24438588    20920257    23761445    25244985    14747013    17210077   

EMBL

BABH01024703    AB437369    BAO53210.1    AGBW02011619    OWR46419.1    KQ460938    + More
KPJ10658.1    NWSH01003455    PCG66264.1    ODYU01004410    SOQ44254.1    KZ150010    PZC75094.1    KQ459167    KPJ03454.1    JTDY01006675    KOB65795.1    JRES01000266    KNC32816.1    GBXI01013142    GBXI01012634    GBXI01011050    JAD01150.1    JAD01658.1    JAD03242.1    GBXI01015114    JAC99177.1    CCAG010014739    CH933806    EDW15332.1    GAMC01014489    GAMC01014488    JAB92066.1    GAKP01009679    JAC49273.1    KRG01518.1    GDHF01015568    GDHF01006261    JAI36746.1    JAI46053.1    GAKP01009680    JAC49272.1    AJVK01006456    JXJN01022512    JXJN01022513    OUUW01000008    SPP84061.1    SPP84060.1    CM000070    KRT01192.1    KRT01193.1    CH479185    EDW38203.1    EAL28950.1    SPP84063.1    SPP84062.1    KRT01191.1    KRT01194.1    EIM52959.2    UFQS01000320    UFQT01000320    SSX02826.1    SSX23194.1    CP012526    ALC47866.1    CH964232    EDW81381.1    AJWK01021796    CH916369    EDV92918.1    CH940650    EDW68410.1    KRF83827.1    KRF83829.1    KRF83828.1    KRF83830.1    CH902617    EDV42801.1    KPU79926.1    KPU79928.1    KPU79925.1    KPU79927.1    CM000364    EDX12034.1    CH480821    EDW55276.1    BT044577    ACI16539.1    AE014297    BT003789    AAF54159.2    AAF54160.2    AAO41472.1    AAS65124.1    BT010330    AAQ55961.1    CH954181    EDV48191.1    CM000160    EDW96325.1    AHN57213.1    KRK03078.1    KRK03077.1    AJWK01026016    AJWK01026773    GFDF01007784    JAV06300.1    AJVK01006453    GFDF01007783    JAV06301.1    CVRI01000047    CRK98534.1    CRK98532.1    DS232056    EDS33382.1    GFDL01014150    JAV20895.1    AXCN02001867    AAAB01008980    EAA13954.3    ATLV01020673    KE525304    KFB45507.1    GGFK01005204    MBW38525.1    GGFK01005095    MBW38416.1    GGFL01003807    MBW67985.1    GGFL01003806    MBW67984.1    ADMH02000465    ETN66368.1    ATLV01012463    KE524793    KFB36836.1    AAAB01008846    EAA06325.5    AXCM01003740    APCN01005275   

Proteomes

UP000005204    UP000007151    UP000053240    UP000218220    UP000053268    UP000037510    + More
UP000037069    UP000091820    UP000092444    UP000092443    UP000092445    UP000009192    UP000092462    UP000092460    UP000095301    UP000268350    UP000095300    UP000001819    UP000008744    UP000092553    UP000007798    UP000092461    UP000001070    UP000008792    UP000007801    UP000000304    UP000001292    UP000000803    UP000008711    UP000002282    UP000192221    UP000183832    UP000002320    UP000075886    UP000075880    UP000075884    UP000007062    UP000030765    UP000069272    UP000000673    UP000075885    UP000075900    UP000076408    UP000075920    UP000075883    UP000076407    UP000075903    UP000075840    UP000075881    UP000075901   

PRIDE

H9JKH6    W8VYR7    B5X0K8    Q9VHY7    Q6NQV8   

Pfam

PF00520   Ion_trans        + More
PF00023   Ank
PF12796   Ank_2
PF00380   Ribosomal_S9

Interpro

IPR002110   Ankyrin_rpt        + More
IPR020683   Ankyrin_rpt-contain_dom       
IPR005821   Ion_trans_dom       
IPR036770   Ankyrin_rpt-contain_sf       
IPR020568   Ribosomal_S5_D2-typ_fold       
IPR014721   Ribosomal_S5_D2-typ_fold_subgr       
IPR000754   Ribosomal_S9       

SUPFAM

SSF48403   SSF48403        + More
SSF54211   SSF54211       

Gene 3D

1.25.40.20     3.30.230.10    

CDD

cd00204  ANK

ProteinModelPortal

H9JKH6   W8VYR7   A0A212EY44   A0A0N1INX4   A0A2A4J425   A0A2H1VVM8   + More
A0A2W1BN88   A0A194QDF8   A0A0L7KRS9   A0A0L0CKM1   A0A0A1WRK9   A0A0A1WL94   A0A1A9WFM6   A0A1B0FNB9   A0A1A9YI35   A0A1A9Z6J3   B4K7I8   W8BFL5   A0A034W680   A0A0Q9XA97   A0A0K8VD15   A0A034W4P9   A0A1B0GQ57   A0A1B0BY82   A0A1I8MKT5   A0A3B0KG84   A0A3B0K7L8   A0A1I8PRH0   A0A1I8MKS7   A0A0R3NJS7   B4GMX9   A0A1I8PRL8   A0A1I8MKT1   Q294L4   A0A3B0JSR8   A0A3B0JUI7   A0A0R3NJU9   A0A0R3NJP8   I5APS4   A0A1I8PRL4   A0A336LYY4   A0A0M4EH70   B4N8D0   A0A1B0GJI4   B4JI37   B4M0V1   A0A0Q9WUI7   A0A0Q9WSR2   A0A0Q9WIQ4   B3LXF7   A0A0P9C947   A0A0P8YEQ8   B4R0A9   B4I4Y3   B5X0K8   Q9VHY7   Q6NQV8   B3NYS8   B4PRD7   A0A0B4LGT2   A0A0R1E1C4   A0A0R1E1Q9   A0A1W4VYY7   A0A1W4VZM1   A0A1B0CSF7   A0A1B0CSY4   A0A1L8DIW8   A0A1B0GQ56   A0A1L8DIP3   A0A1J1IHM1   A0A1J1IG66   B0WRI4   A0A1Q3F007   A0A182QEN6   A0A182JF65   A0A182N8V8   Q7Q0M1   A0A084W5L3   A0A2M4ACK1   A0A182F493   A0A2M4ACA0   A0A2M4CRT3   A0A2M4CRM4   W5JSU2   A0A1S4H4F7   A0A182IYC8   A0A182FIN2   A0A182N0Q4   A0A084VFU2   A0A182PBH5   A0A182R283   A0A182YF07   A0A182W659   Q7QF89   A0A182MF93   A0A182XRE9   A0A182VHX2   A0A182IGN3   A0A182KA14   A0A182S924  

PDB

6MOL     E-value=1.04475e-38,     Score=405

KEGG

101741755    no KO assigned | (RefSeq) BmTRPA3; transient receptor potential channel pyrexia

GO

GO:0016021   GO:0005216   GO:0009270   GO:0007605   GO:0003735   GO:0006412   GO:0005840   GO:0006816   GO:0005262   GO:0034703   GO:0005261   GO:0006812   GO:0005515   GO:0006811   GO:0016020   GO:0007155   GO:0000049   GO:0004812   GO:0043039   GO:0042555   GO:0048384   GO:0055085  

Length:

922

Number of predicted TMHs:

5

Exp number of AAs in TMHs:

113.19625

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00745

outside

1  -  563

TMhelix

564  -  586

inside

587  -  597

TMhelix

598  -  620

outside

621  -  629

TMhelix

630  -  652

inside

653  -  663

TMhelix

664  -  686

outside

687  -  730

TMhelix

731  -  753

inside

754  -  922

 

 

Pi

191.028109

Theta

178.642197

Tajima's D

-1.368705

CLR

1.540645

CSRT

0.0793460326983651

Interpretation

Uncertain