Gene

KWMTBOMO03760  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA010057

Annotation

PREDICTED:_uncharacterized_protein_CG1785_[Bombyx_mori]

Location

Bomo_Chr7(+):880609-888097      View in EpiBrowser

Full name

Ribosome biogenesis protein NOP53      

Location in the cell

Nuclear   Reliability : 3.846

CDS

ATGACGGAGACTAAGAAAAAGAAACATGTATCGAAAAAGAATAAAAAAGCGTGGCGGAAACACTGTGATATTAAAGACGTTGAAAATTTCCTGGAAGATCAGCGATTAGAAGAGAGACTAGGTAAATTTGAAACAAAACCGGACAGTGAGATCTTCATCATAGACACGGGAGGAGATGGTATCAAAACTGAAGATGAAGACATTAAGCCTATATCATTAAAAAAACTAAGAAGAAGTAAGCTAGGGGAATTCCCTAAATGCTTTGAAATTTTACTACCCGATTCAAAGGTGCAAGATCCAAATACAAAACGAAATACCGTAAAACCAGTAGGTTCCAAGCCAACGGCCTTCAGTAAATTAACTGATAAACGAAAATATGAGAAGGGTATTTATCAGAAGAAAATAGAAGATGCACGGAGGAACAGGAAAATGGCATTGCAAAAGAAGAGGCGGGCAAAACAAGTGCGACAGAATTTCAATTTGGACCTTTGGGGCAAAGATTTACCAGATTCCAAAACCATCCCCTCAACATTATGCGATGAGTTCATTCCTCCACAAGCTCAGCTGCACAATGTGTTACCAGAACAGCGTCTTCGACAGAAGCCTCCACTTGCCCAGACTCTAGTGACTCGTGCCGCTGTAGATGTTCCACACCCTGGAGTCAGCTATAACCCATCATATCAGGAACACCAAGAGCTCCTGCAGGAGGTTGTGCAGCACGAGCAAAAACTGATCAAGAAGGAACAACATCTGGATAGGGTCACCACCAAAATGTTCAAGAAAGTCACCGCTGCTGAAAAAGAAAATCAATGGCGTGAAGAGATGAGTGAAGGTCTGCCGAAACCACATAACCCAGCGGAACATGACTCCGAATCCGACGGAGAGTACAAAGCCATCAACCCTCCCGTTAAGAACAAGAAGAAAGATCACAAGGCTCGAAGGAAACAAAAGGAGAGATTATTGGAGAAGGAACGCCTGAAAAGGGAAAAGATTGACAAAAAGAAGATAACTGATATTTACAAGCTTCGGAAACTGGAGTCTTCGATCAAGAAGGGCGAGAGGGTTCGCGAGGCTCAGCGCGCACAGCGAGCCGCCCGCCGCGCCGCCCGCGCCCGCGCCGCGCCCCCCGCACTCAGCGCGCACCCCGCGCCCGCCCCCGCCCCGCCGCTCGTCGCGCCCGCGCAGCTCTCCGGCGACCTGCGCCGCGTCGCGCCCGCCGTGAACCTTCTCCGCGAACGTTTCGAGTCGCTCCAACACCGCGGCGCCCTCGCAGCCTCCAAGGTCATGATGAAGAAGAAACGGAAATTAAAGAGCTACTTCAAGCCGGGACACAAGGTCACCGACCAAGACGTACAGAAATTTATCAAAAATCATAATATAGAAGTATAG

Protein

MTETKKKKHVSKKNKKAWRKHCDIKDVENFLEDQRLEERLGKFETKPDSEIFIIDTGGDGIKTEDEDIKPISLKKLRRSKLGEFPKCFEILLPDSKVQDPNTKRNTVKPVGSKPTAFSKLTDKRKYEKGIYQKKIEDARRNRKMALQKKRRAKQVRQNFNLDLWGKDLPDSKTIPSTLCDEFIPPQAQLHNVLPEQRLRQKPPLAQTLVTRAAVDVPHPGVSYNPSYQEHQELLQEVVQHEQKLIKKEQHLDRVTTKMFKKVTAAEKENQWREEMSEGLPKPHNPAEHDSESDGEYKAINPPVKNKKKDHKARRKQKERLLEKERLKREKIDKKKITDIYKLRKLESSIKKGERVREAQRAQRAARRAARARAAPPALSAHPAPAPAPPLVAPAQLSGDLRRVAPAVNLLRERFESLQHRGALAASKVMMKKKRKLKSYFKPGHKVTDQDVQKFIKNHNIEV

Description

May play a role in ribosome biogenesis.

Similarity

Belongs to the NOP53 family.

Uniprot

H9JKK6   A0A2A4K625   A0A2W1BK07   R4ITA8   A0A2H1VFJ4   A0A437BSU6   + More
A0A0N1I7U2   A0A194QES8   A0A3G1T1B6   S4PG29   A0A212FAZ9   A0A0L7R0E0   A0A2P8XVS2   A0A1B6KJC7   A0A0C9REE8   D6WA29   A0A0C9QV70   A0A023F7D9   A0A2A3E6G3   A0A088ALV7   A0A0V0G4Q7   A0A069DZ18   A0A224XPQ5   A0A2J7QZ46   K7J1I7   R4FMQ6   A0A232FIA1   A0A067R2S4   A0A0P4VLB7   A0A2J7QZ51   A0A1Y1JRC2   E2BG78   A0A151X2R2   F4W5S2   A0A151I2P2   J3JUR0   A0A195EYG4   A0A1W4X7A1   Q1HQW6   A0A195C0Z4   A0A1S4FVP6   A0A182H531   A0A158P2R2   A0A0A9X8V0   A0A146LLU7   B4L3L1   T1E304   T1DJH8   A0A0K8VH94  

Pubmed

19121390    28756777    26354079    23622113    22118469    29403074    + More
18362917    19820115    25474469    26334808    20075255    28648823    24845553    27129103    28004739    20798317    21719571    22516182    23537049    17204158    17510324    26483478    21347285    25401762    26823975    17994087    24330624   

EMBL

BABH01024683    BABH01024684    BABH01024685    NWSH01000088    PCG79715.1    KZ149996    + More
PZC75412.1    JQ744270    AGC39036.1    ODYU01002307    SOQ39630.1    RSAL01000013    RVE53431.1    KQ460938    KPJ10663.1    KQ459167    KPJ03450.1    MG846910    AXY94762.1    GAIX01006320    JAA86240.1    AGBW02009412    OWR50893.1    KQ414670    KOC64303.1    PYGN01001274    PSN36118.1    GEBQ01028713    JAT11264.1    GBYB01011537    JAG81304.1    KQ971312    EEZ98070.1    GBYB01004567    JAG74334.1    GBBI01001559    JAC17153.1    KZ288353    PBC27298.1    GECL01003084    JAP03040.1    GBGD01001415    JAC87474.1    GFTR01006447    JAW09979.1    NEVH01009076    PNF33859.1    ACPB03004449    GAHY01001629    JAA75881.1    NNAY01000155    OXU30476.1    KK852749    KDR17226.1    GDKW01001401    JAI55194.1    PNF33861.1    GEZM01102830    JAV51769.1    GL448115    EFN85346.1    KQ982576    KYQ54672.1    GL887695    EGI70398.1    KQ976518    KYM82200.1    APGK01050557    BT126975    KB741174    KB632260    AEE61937.1    ENN73241.1    ERL90841.1    KQ981905    KYN33330.1    DQ440328    CH477855    ABF18361.1    EAT35603.1    KQ978379    KYM94512.1    JXUM01110747    KQ565441    KXJ70967.1    ADTU01007397    GBHO01028366    JAG15238.1    GDHC01009668    JAQ08961.1    CH933810    EDW07139.1    GALA01000249    JAA94603.1    GALA01000251    JAA94601.1    GDHF01014091    JAI38223.1   

Proteomes

UP000005204    UP000218220    UP000283053    UP000053240    UP000053268    UP000007151    + More
UP000053825    UP000245037    UP000007266    UP000242457    UP000005203    UP000235965    UP000002358    UP000015103    UP000215335    UP000027135    UP000008237    UP000075809    UP000007755    UP000078540    UP000019118    UP000030742    UP000078541    UP000192223    UP000008820    UP000078542    UP000069940    UP000249989    UP000005205    UP000009192   

PRIDE

H9JKK6   

Pfam

PF07767   Nop53

Interpro

IPR011687   Nop53/GLTSCR2       

ProteinModelPortal

H9JKK6   A0A2A4K625   A0A2W1BK07   R4ITA8   A0A2H1VFJ4   A0A437BSU6   + More
A0A0N1I7U2   A0A194QES8   A0A3G1T1B6   S4PG29   A0A212FAZ9   A0A0L7R0E0   A0A2P8XVS2   A0A1B6KJC7   A0A0C9REE8   D6WA29   A0A0C9QV70   A0A023F7D9   A0A2A3E6G3   A0A088ALV7   A0A0V0G4Q7   A0A069DZ18   A0A224XPQ5   A0A2J7QZ46   K7J1I7   R4FMQ6   A0A232FIA1   A0A067R2S4   A0A0P4VLB7   A0A2J7QZ51   A0A1Y1JRC2   E2BG78   A0A151X2R2   F4W5S2   A0A151I2P2   J3JUR0   A0A195EYG4   A0A1W4X7A1   Q1HQW6   A0A195C0Z4   A0A1S4FVP6   A0A182H531   A0A158P2R2   A0A0A9X8V0   A0A146LLU7   B4L3L1   T1E304   T1DJH8   A0A0K8VH94  

KEGG

101741616    K14840 nucleolar protein 53 | (RefSeq) uncharacterized protein CG1785

GO

GO:0005654   GO:0005730   GO:0000027   GO:0008097   GO:0006364  

PANTHER

PTHR14211  

Subcellular location

Nucleus  
Nucleolus  
Nucleoplasm  

Length:

462

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00048

Exp number, first 60 AAs:

0

Total prob of N-in:

0.04122

outside

1  -  462

 

 

Pi

183.588663

Theta

148.543717

Tajima's D

0.490565

CLR

1.172907

CSRT

0.510374481275936

Interpretation

Uncertain