Gene

KWMTBOMO03757  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA010055

Annotation

PREDICTED:_gamma-taxilin_[Bombyx_mori]

Location

Bomo_Chr7(+):838989-841463      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.665 Nuclear   Reliability : 1.158

CDS

ATGGCAAAACAAATGGCATTAGAATCTCAATTAGCGGATGCCAAGCTTCAGAAGGCAAGCCTCGAACATCAAGCGGACAGAGAGAGGCTGATGGCTGAGATGGAACAGATGAAGGTGAACCTAGCCCAGTACAGAGCTAAGATAGCAGAACTTCAGGGCACTGAAACTAGTCTGCGGTCCCAGCTGGCCGTCTACACCGACAAGTATGATGAGTTCCAGAACGCGCTGGTCAAGAGTAACCAGGTCTTTGGGGGGTTCAAGGAGCAGATGGAAAAGATGTCAAAGAAAATCAAGAAGTTGGAAAAAGAGTCTCTCACGTGGAAGCAGCGGTGGGAGACATCGAAGACGGCCCTCATAGACATGTGCGCGGAGAAGCAGGCCGGCGAGGAGCGGTCCGCCAGGCAACTACACCACATGCAGGGCCTCTGTCGGACGCTGCAGGTCTCAGTATAG

Protein

MAKQMALESQLADAKLQKASLEHQADRERLMAEMEQMKVNLAQYRAKIAELQGTETSLRSQLAVYTDKYDEFQNALVKSNQVFGGFKEQMEKMSKKIKKLEKESLTWKQRWETSKTALIDMCAEKQAGEERSARQLHHMQGLCRTLQVSV

Similarity

Belongs to the LAMP family.

Uniprot

A0A2W1BP65   A0A3S2M7T3   A0A1E1WV85   A0A0N1PG31   A0A2A4K654   S4P0L1   + More
A0A194QD30   H9JKK4   A0A2J7Q2P0   A0A067RHW3   A0A1B6MJZ3   A0A1B6EY18   A0A1B6FC98   A0A1B6CXH5   A0A1B6D608   A0A182HC72   Q17IB9   K7IZF7   A0A146KU62   A0A0A9Y934   A0A0K8T116   B0WX39   E0VBF1   A0A1Q3F7Z4   A0A1Q3F8L3   A0A224X9Z9   J9JVI3   A0A0P4W2Q7   A0A2S2NJU9   U5ETX2   E2BVZ3   A0A2M4AQE8   A0A2M3ZAK4   A0A2M3ZB09   W5J609   A0A182F284   A0A182SFM8   A0A023EQ28   A0A182RGS0   A0A2M4BP85   A0A2M4BQ35   A0A2M4BPE6   A0A423U3L3   A0A182QVR1   A0A182PW23   A0A182MWH8   A0A0N8C6Q9   A0A0P5TNE3   Q7Q1R1   A0A182XND6   A0A0P5MJ34   A0A182UFN9   A0A0P5KHP6   A0A2C9GSB3   A0A182UT21   A0A1S4H1S0   A0A0P5NRF7   A0A0P5KIX1   A0A0P5N645   A0A0P5YX20   A0A0P4ZH36   A0A0P5J1E9   A0A0P5MHM0   A0A0P5UHW9   A0A0P5NR07   A0A0P5XW12   A0A0P5P2A4   A0A0P5P281   A0A0N8BUS8   A0A0P5NKA4   A0A0P5E8K8   A0A0P5Y1W2   A0A0N8AIJ8   A0A0P5NWS9   A0A0P5UKR7   A0A0P5EG48   A0A0P5NWW3   A0A0P6DGF5   A0A0P5SA49   A0A0P5CZC7   A0A0P5R619   A0A0P5QBC9   A0A0P5BGQ5   A0A0P5UHQ0   A0A0P5QDW1   A0A0N8C4M1   A0A0P5HPW6   A0A162RU05   A0A0N8E3P5   A0A0P5HBY7   A0A0C9Q8Q4   A0A0P6E5M7   A0A182VTY0   A0A0P6F708   A0A182NBI6   A0A0P6H9U4   A0A0P4XWR5   A0A0P6AI48  

Pubmed

28756777    26354079    23622113    19121390    24845553    26483478    + More
17510324    20075255    26823975    25401762    20566863    27129103    20798317    20920257    23761445    24945155    12364791   

EMBL

KZ149996    PZC75414.1    RSAL01000013    RVE53429.1    GDQN01000162    JAT90892.1    + More
KQ460938    KPJ10665.1    NWSH01000088    PCG79717.1    GAIX01010867    JAA81693.1    KQ459167    KPJ03448.1    BABH01024674    BABH01024675    BABH01024676    BABH01024677    BABH01024678    BABH01024679    NEVH01019368    PNF22844.1    KK852498    KDR22608.1    GEBQ01003798    JAT36179.1    GECZ01026955    JAS42814.1    GECZ01021968    JAS47801.1    GEDC01019139    JAS18159.1    GEDC01016188    JAS21110.1    JXUM01032914    KQ560971    KXJ80171.1    CH477240    EAT46459.1    GDHC01020239    JAP98389.1    GBHO01014900    JAG28704.1    GBRD01006926    JAG58895.1    DS232158    EDS36300.1    DS235028    EEB10707.1    GFDL01011373    JAV23672.1    GFDL01011176    JAV23869.1    GFTR01007250    JAW09176.1    ABLF02037544    GDKW01000801    JAI55794.1    GGMR01004830    MBY17449.1    GANO01004161    JAB55710.1    GL451079    EFN80141.1    GGFK01009680    MBW43001.1    GGFM01004813    MBW25564.1    GGFM01004887    MBW25638.1    ADMH02002155    ETN58239.1    GAPW01001941    JAC11657.1    GGFJ01005738    MBW54879.1    GGFJ01005737    MBW54878.1    GGFJ01005741    MBW54882.1    QCYY01000704    ROT83290.1    AXCN02000672    AXCM01001457    GDIQ01109387    JAL42339.1    GDIP01125197    JAL78517.1    AAAB01008980    EAA13825.3    GDIQ01155968    JAK95757.1    GDIQ01190960    JAK60765.1    APCN01005770    GDIQ01142834    JAL08892.1    GDIQ01185055    JAK66670.1    GDIQ01158070    JAK93655.1    GDIP01053413    JAM50302.1    GDIP01213296    JAJ10106.1    GDIQ01212696    JAK39029.1    GDIQ01167268    JAK84457.1    GDIP01112753    JAL90961.1    GDIQ01139021    JAL12705.1    GDIP01066610    JAM37105.1    GDIQ01141086    JAL10640.1    GDIQ01139022    JAL12704.1    GDIQ01142835    JAL08891.1    GDIQ01141087    JAL10639.1    GDIP01150148    JAJ73254.1    GDIP01065160    JAM38555.1    GDIP01143953    JAJ79449.1    GDIQ01158069    JAK93656.1    GDIP01115457    JAL88257.1    GDIP01160535    JAJ62867.1    GDIQ01136580    JAL15146.1    GDIQ01086850    JAN07887.1    GDIQ01107189    JAL44537.1    GDIP01163339    JAJ60063.1    GDIQ01107188    JAL44538.1    GDIQ01116489    JAL35237.1    GDIP01184637    JAJ38765.1    GDIP01112754    JAL90960.1    GDIQ01121733    JAL29993.1    GDIQ01115291    JAL36435.1    GDIQ01230092    JAK21633.1    LRGB01000115    KZS20780.1    GDIQ01064908    JAN29829.1    GDIQ01232142    JAK19583.1    GBYB01010633    JAG80400.1    GDIQ01067758    JAN26979.1    GDIQ01054414    JAN40323.1    GDIQ01022416    JAN72321.1    GDIP01239693    JAI83708.1    GDIP01034193    JAM69522.1   

Proteomes

UP000283053    UP000053240    UP000218220    UP000053268    UP000005204    UP000235965    + More
UP000027135    UP000069940    UP000249989    UP000008820    UP000002358    UP000002320    UP000009046    UP000007819    UP000008237    UP000000673    UP000069272    UP000075901    UP000075900    UP000283509    UP000075886    UP000075885    UP000075883    UP000007062    UP000076407    UP000075902    UP000075840    UP000075903    UP000076858    UP000075920    UP000075884   

PRIDE

H9JKK4   

Pfam

PF09728   Taxilin        + More
PF01299   Lamp

Interpro

IPR026183   Taxilin_fam        + More
IPR002000   Lysosome-assoc_membr_glycop       
IPR018134   LAMP_CS       

ProteinModelPortal

A0A2W1BP65   A0A3S2M7T3   A0A1E1WV85   A0A0N1PG31   A0A2A4K654   S4P0L1   + More
A0A194QD30   H9JKK4   A0A2J7Q2P0   A0A067RHW3   A0A1B6MJZ3   A0A1B6EY18   A0A1B6FC98   A0A1B6CXH5   A0A1B6D608   A0A182HC72   Q17IB9   K7IZF7   A0A146KU62   A0A0A9Y934   A0A0K8T116   B0WX39   E0VBF1   A0A1Q3F7Z4   A0A1Q3F8L3   A0A224X9Z9   J9JVI3   A0A0P4W2Q7   A0A2S2NJU9   U5ETX2   E2BVZ3   A0A2M4AQE8   A0A2M3ZAK4   A0A2M3ZB09   W5J609   A0A182F284   A0A182SFM8   A0A023EQ28   A0A182RGS0   A0A2M4BP85   A0A2M4BQ35   A0A2M4BPE6   A0A423U3L3   A0A182QVR1   A0A182PW23   A0A182MWH8   A0A0N8C6Q9   A0A0P5TNE3   Q7Q1R1   A0A182XND6   A0A0P5MJ34   A0A182UFN9   A0A0P5KHP6   A0A2C9GSB3   A0A182UT21   A0A1S4H1S0   A0A0P5NRF7   A0A0P5KIX1   A0A0P5N645   A0A0P5YX20   A0A0P4ZH36   A0A0P5J1E9   A0A0P5MHM0   A0A0P5UHW9   A0A0P5NR07   A0A0P5XW12   A0A0P5P2A4   A0A0P5P281   A0A0N8BUS8   A0A0P5NKA4   A0A0P5E8K8   A0A0P5Y1W2   A0A0N8AIJ8   A0A0P5NWS9   A0A0P5UKR7   A0A0P5EG48   A0A0P5NWW3   A0A0P6DGF5   A0A0P5SA49   A0A0P5CZC7   A0A0P5R619   A0A0P5QBC9   A0A0P5BGQ5   A0A0P5UHQ0   A0A0P5QDW1   A0A0N8C4M1   A0A0P5HPW6   A0A162RU05   A0A0N8E3P5   A0A0P5HBY7   A0A0C9Q8Q4   A0A0P6E5M7   A0A182VTY0   A0A0P6F708   A0A182NBI6   A0A0P6H9U4   A0A0P4XWR5   A0A0P6AI48  

KEGG

101741340    no KO assigned | (RefSeq) gamma-taxilin

GO

GO:0019905   GO:0016021   GO:0007029   GO:0043565   GO:0005886   GO:0007155   GO:0000049   GO:0004812   GO:0043039   GO:0042555   GO:0048384  

PANTHER

PTHR16127  

Subcellular location

Membrane  

Length:

150

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.20558

outside

1  -  150

 

 

Pi

246.590166

Theta

175.83368

Tajima's D

1.141445

CLR

0.031152

CSRT

0.697715114244288

Interpretation

Uncertain