SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03755  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA010030
Annotation
hypothetical_protein_KGM_13882_[Danaus_plexippus]
Location in the cell
Nuclear   Reliability : 2.461
 

Sequence

CDS
ATGACTTCAACACCATTCAACGTTGGCCTCAATGACGGAGCTCGTCTATCAAGCAGGGTGCTCCGCCCCCCCGGTGGTGGCCACACTAACATCTTCGATTCCGAACCGGAGCCACCGAGGACCGGGCGCCGTGCCGTTCCACCAAGCGCAACGAGCACTTTCAGCCACGGACAAGGAGATGAGCCGAAAGCGACCAACGGCACTTCAGTAGCGACCAACGGTCAGTCCACTCCTAAGGAGAGCCCGGAGCCACAGATCCAGCAGGAGGCACCTGCTGCAGCAGAGCGCGCTCCTAAAGCCGACAGTCCAGTCCGAGCGGCCCCGGAGCAGCCCCGGGCCGAAGCCCCCAAGCGCGTCAGGGTCCCCCCCGGCGGGTTCTCCTCGGGCTTGTGGTAA
Protein
MTSTPFNVGLNDGARLSSRVLRPPGGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVATNGQSTPKESPEPQIQQEAPAAAERAPKADSPVRAAPEQPRAEAPKRVRVPPGGFSSGLW

Summary

Pfam
PF17054   JUPITER
Interpro
IPR033335   JUPITER       

Ontologies

GO

Topology

Length:
131
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.06349
outside
1  -  131
 
 

Population Genetic Test Statistics

Pi
217.069563
Theta
168.934466
Tajima's D
0.661715
CLR
1.91132
CSRT
0.56257187140643
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
28556443 ESPEPQIQQEAPAAAER 100.00 3e-09
26280517 VINKFEASIVK 95.24 6e-09
25044914 VIQTPEVAR 95.24 6e-09
28467696 VIQWIVDQK 95.24 6e-09
26280517 RAEIMIQQAEK 100.00 6e-08
25044914 RATVDDFPICVHIVSDEYEQISSEAIEAGR 100.00 6e-08
28467696 RATMIQEMHFR 100.00 6e-08
26280517 AVPEITSKI 100.00 4e-07
25044914 AVPPIYNPVIPCVHPIPGGMYPGR 100.00 4e-07
28467696 AVPPIYNPVIPCVHPIPGGMYPGR 100.00 4e-07
28556443 AVPPSATSTFSHGQGDEPK 100.00 4e-07
28556443 AVPPSATSTFSHGQGDEPK 100.00 4e-07
28556443 AVPPSATSTFSHGQGDEPK 100.00 4e-07
28556443 ATNGTSVATNGQSTPK 100.00 4e-07
28556443 VLRPPGGGHTNIFDSEPEPPR 100.00 4e-07
28556443 ATNGTSVATNGQSTPK 100.00 6e-04
28556443 ATNGTSVATNGQSTPK 100.00 6e-04
28556443 VPPGGFSSGLW 100.00 6e-04
28556443 TSEMVNSAIAELK 100.00 6e-04
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