SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03753  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA010032
Annotation
PREDICTED:_protein_jagunal_[Amyelois_transitella]
Full name
Protein jagunal      
Location in the cell
PlasmaMembrane   Reliability : 4.345
 

Sequence

CDS
ATGGCTTCCCGCGGTGGTGTTATGGTGACGGGGACAAACGGGGCTGATTTTGAACATCGTGAAAAAGTAGCCATACAGTATCACATAAGTGCACTTAACAAATCTCGCCTCAAGTACTGTGTGTTCTTCCACCACATACTGTTCCTCGGGATGATGGCAAAGCTCTCTGCAGATGTACTTGACAAACTTGACATATTTATACTTGAAGTTGAAGAGTTGCAAATTCCACCGCCCCTCTGGTGGGAATACATCTGGTGCTTGTCGTTGCTACTCTCGTTTCTTGGTCTATCAGCAATCAAACGTAACAACATACGTCACCTCCGGCAGTATGTTTATGGCATAGTGGCATTAGGATTCTGTCCGTTATTGTACTGTGTATTGTACTACTGTGGGGATGTTTGGAGATATTTGTCACATGATGATGAAGATGATAGTTCTGAGGTGGATATAGAACTGTGGCAGGGTTACCCCTATGGCCTATTATGGTATGCCTTCGTGCTATTAGCATCACAAGTACATTTTTTCCAACTGTACTTCTCGTTTAATTTACTAAAAGCTTGGCGAGCTCGAGGAGCCCTCAGGAAATCAGATTAG
Protein
MASRGGVMVTGTNGADFEHREKVAIQYHISALNKSRLKYCVFFHHILFLGMMAKLSADVLDKLDIFILEVEELQIPPPLWWEYIWCLSLLLSFLGLSAIKRNNIRHLRQYVYGIVALGFCPLLYCVLYYCGDVWRYLSHDDEDDSSEVDIELWQGYPYGLLWYAFVLLASQVHFFQLYFSFNLLKAWRARGALRKSD

Summary

Description
Required for endoplasmic reticulum organization and proper vesicular traffic during vitellogenesis. Required for oocyte and bristle growth.
Miscellaneous
'Jagunal' means 'small egg'.
Similarity
Belongs to the jagunal family.
Keywords
Complete proteome   Developmental protein   Differentiation   Endoplasmic reticulum   Membrane   Oogenesis   Reference proteome   Transmembrane   Transmembrane helix  
Feature
chain  Protein jagunal
EMBL
BABH01024668    BABH01024669    KZ149996    PZC75418.1    NWSH01000088    PCG79709.1    + More
ODYU01001323    SOQ37354.1    KQ460938    KPJ10669.1    AK403203    BAM19629.1    RSAL01000013    RVE53424.1    GAIX01012146    JAA80414.1    KQ459167    KPJ03444.1    AGBW02009154    OWR51545.1    ATLV01013714    KE524881    KFB38157.1    APCN01002144    AAAB01008879    EAA08399.2    GGFK01008964    MBW42285.1    JXUM01094782    JXUM01094783    JXUM01094784    JXUM01094785    JXUM01094786    KQ564152    KXJ72678.1    GGFM01003424    MBW24175.1    CH477378    EJY58147.1    GFDL01011292    JAV23753.1    AXCN02000164    DS231830    EDS30751.1    GGFJ01009577    MBW58718.1    GFDL01011338    JAV23707.1    GFDL01011339    JAV23706.1    GAPW01004560    JAC09038.1    GGFK01009393    MBW42714.1    GGFM01003582    MBW24333.1    GFDL01011374    JAV23671.1    EJY58146.1    GGFK01009520    MBW42841.1    GDAI01001138    JAI16465.1    GFDL01011416    JAV23629.1    ADMH02002074    ETN59563.1    AXCM01005290    GALA01000786    JAA94066.1    KK853380    KDR08015.1    KQ435811    KOX72897.1    AK417905    BAN21120.1    KZ288285    PBC29476.1    GANO01000468    JAB59403.1    KQ434889    KZC10396.1    GFDF01011092    JAV02992.1    GL764272    EFZ18012.1    KQ414620    KOC67653.1    KQ760551    OAD59819.1    KK107078    QOIP01000011    EZA60489.1    RLU16777.1    JXJN01024992    GEDC01030370    GEDC01024743    GEDC01004287    JAS06928.1    JAS12555.1    JAS33011.1    KK854035    PTY09938.1    CCAG010012182    EZ424335    EZ424338    ADD20611.1    GBHO01040186    GBRD01006823    GDHC01012423    JAG03418.1    JAG58998.1    JAQ06206.1    AJWK01003967    GECZ01005589    GECZ01002603    JAS64180.1    JAS67166.1    GECU01020477    GECU01011749    JAS87229.1    JAS95957.1    CH933806    EDW15684.1    KQ978023    KYM97969.1    KQ981948    KYN32630.1    JRES01000562    KNC30193.1    CP012526    ALC46763.1    GL887898    EGI69589.1    CH964272    EDW83910.1    GL437540    EFN70305.1    CH902617    EDV43774.1    KQ976723    KYM76661.1    ADTU01025097    GECL01000723    JAP05401.1    GBBI01000227    JAC18485.1    GDKW01001463    JAI55132.1    ACPB03001254    GL448450    EFN84624.1    KQ980322    KYN16593.1    DS235876    EEB19778.1    CH480821    EDW55016.1    CM000364    EDX11784.1    CH954181    EDV47948.1    CM000160    EDW97788.1    CH940650    EDW66973.1    GBGD01003084    JAC85805.1    OUUW01000007    SPP83157.1    AE014297    AAF51956.1    AY061443    CH916369    EDV93661.1    CH479179    EDW25134.1    CM000070   
Pfam
PF07086   Jagunal        + More
PF09347   DUF1989
Interpro
IPR009787   Jagunal        + More
IPR018959   DUF1989       

Ontologies

Topology

Subcellular location
Endoplasmic reticulum membrane  
Length:
197
Number of predicted TMHs:
4
Exp number of AAs in TMHs:
83.07704
Exp number, first 60 AAs:
18.73331
Total prob of N-in:
0.94891
POSSIBLE N-term signal
sequence
inside
1  -  40
TMhelix
41  -  60
outside
61  -  79
TMhelix
80  -  99
inside
100  -  110
TMhelix
111  -  130
outside
131  -  161
TMhelix
162  -  184
inside
185  -  197
 
 

Population Genetic Test Statistics

Pi
444.65892
Theta
193.772405
Tajima's D
3.388644
CLR
0.315951
CSRT
0.991900404979751
Interpretation
Uncertain
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