Silkworm Genome Informatics Database

Gene

KWMTBOMO03744 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA010047

Annotation

PREDICTED:_uncharacterized_protein_LOC105842972_[Bombyx_mori]

Location

Bomo_Chr7(+):414939-415908 View in EpiBrowser

Location in the cell

Cytoplasmic Reliability : 1.476

CDS

ATGAGGGTGCTGTTAGTTTGCCTGGCAAGCTTACTGGTCTGCCTGAAGACGGCTGATTTTCACTCATTGCCGCAAAAAGATTACGACACTGACACCAGTGGGAATAGCAGCTTGGATCCCAACATCTCCAGCGGAAACCTTGATTTTAACATCACAACGTTCATCGTGCGTTACGTATATAGGAATGACAAGAAAGAGTCCATGGGCATCTACGCCCACAAGAACGGCAAAATAAAAAAAGTTTTAGAAGACGGCATGGCCATCTCGGATTGGTTTCCAAAGTCGTTCACCTATTTAGGCAATAAGGACGGTATCTACGCTTACGATAGCGACACAGAGAAGCTTGAGAAGTACGGCAATCTGAGTGACAGCATCATCGGGATCGCAAAAGAGAACCGCACCGACGACCTGTACATTCTGACGGAAGACCACGTCGTCTACAAGGTCATCGAGCAAGGCACCAAGAAGATCAAGGTCAACGAGGCTGAGCATGCTGAGCAAATAGCGCTGGACTGGGATGACAACTTGTACTACATCGGAGCGAACAATCAGCCGTATGTTGTCGCTTCGCATGGTGCGAAGAAGATCGGAGGTCTTCCAACTAACCCAACCTCAGCGTTTATCTCTAGGCCTCCGATCACGATAGAGCACGGAGCGTGGTTTATGTCCGAAAAACAGCCCTACATCATCTATCCCAACGCGACCAGCGAACCATACGTATTCAACGACCAAGAGAAGTTGGAATATGAGAAAAGAAATCGTGCTGTCGAAGCTATATTCTTACAAGTGAGGGACCAAGCAGGGGAATAA

Protein

MRVLLVCLASLLVCLKTADFHSLPQKDYDTDTSGNSSLDPNISSGNLDFNITTFIVRYVYRNDKKESMGIYAHKNGKIKKVLEDGMAISDWFPKSFTYLGNKDGIYAYDSDTEKLEKYGNLSDSIIGIAKENRTDDLYILTEDHVVYKVIEQGTKKIKVNEAEHAEQIALDWDDNLYYIGANNQPYVVASHGAKKIGGLPTNPTSAFISRPPITIEHGAWFMSEKQPYIIYPNATSEPYVFNDQEKLEYEKRNRAVEAIFLQVRDQAGE

Uniprot

H9JKJ6 H9JY93 H9JKJ3 H9JKJ1 H9JKI9 H9JKJ2 + More
H9JKJ0 H9JKJ7 H9JKJ4 H9JY94 H9JKI5 H9JY92 H9JXD8 A0A0N1I8U8 A0A2W1BQC8 A0A212F6C0 A0A212FFR6 A0A194Q6N7 A0A212FFS7

Pubmed

19121390 26354079 28756777 22118469

EMBL

BABH01024640 BABH01042704 BABH01024639 BABH01024633 BABH01024627 BABH01024637 + More
BABH01024628 BABH01024642 BABH01024636 BABH01042705 BABH01043326 KQ460299 KPJ16156.1 KZ149980 PZC75824.1 AGBW02010068 OWR49264.1 AGBW02008773 OWR52581.1 KQ459386 KPJ01198.1 OWR52580.1

Proteomes

UP000005204 UP000053240 UP000007151 UP000053268

PRIDE

H9JKJ6 H9JY93 H9JKJ3 H9JKJ1 H9JKI9 H9JKJ2 + More
H9JKJ0 H9JKJ7 H9JKJ4 H9JY94 H9JKI5 H9JY92 H9JXD8

Interpro

IPR015943 WD40/YVTN_repeat-like_dom_sf + More
IPR011047 Quinoprotein_ADH-like_supfam

SUPFAM

SSF50998 SSF50998

Gene 3D

2.130.10.10

ProteinModelPortal

H9JKJ6 H9JY93 H9JKJ3 H9JKJ1 H9JKI9 H9JKJ2 + More
H9JKJ0 H9JKJ7 H9JKJ4 H9JY94 H9JKI5 H9JY92 H9JXD8 A0A0N1I8U8 A0A2W1BQC8 A0A212F6C0 A0A212FFR6 A0A194Q6N7 A0A212FFS7

KEGG

105842972 no KO assigned | (RefSeq) uncharacterized LOC105842972

GO

SignalP

Position: 1 - 18, Likelihood: 0.991079

Length:

269

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.07011

Exp number, first 60 AAs:

0.06992

Total prob of N-in:

0.01708

outside

1 - 269

Pi

253.803847

Theta

213.994878

Tajima's D

0.704733

CLR

0

CSRT

0.576871156442178

Interpretation

Uncertain

Source	Sequence	Identity	Evalue
24402669	KIGDPSGINSCFVGCFMK	96.77	3e-17
24402669	IGGIGTVPVGR	96.67	1e-16
24402669	QPYETDIKVPIIIK	96.30	1e-12

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree