SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03743
Pre Gene Modal
BGIBMGA010045
Annotation
PREDICTED:_uncharacterized_protein_LOC105842978_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.468
 

Sequence

CDS
ATGAGGGTGCTGTTAGTTTGCCTGGCAGGTTTACTGGTTTGCCTGAAGACGGCTGATTCTCACTCATTGCCGCATAAGGATTACGAAACTGATTCCAGCAAACATTACATTACCAATCCATTGAATGACACCAGCGGAAATAATAGCAGCTCGGTCCCCAACAACTCCATCAGAAACCTTGATTCTAACACCACAACATTCATTGTGCGTTACGTAACTACGGTTGACAAGAAAGAGTACAAGGGTATATACGCCCACAAGAACGGCAAAGTGAAGAAAATATTGGAAGGCGGCAGGGCCGTCTCTGTTTGGCCTTCGAAGTCGCGCGCCTATTTGGGCCATAAAGACGGTATCTACGTTTACGACACCGAAACAGAGAAGCTTGAGAAGTACGGCAATCTGAGTGATAGCATCATCGGGATCGTAAAAGAGAACTGCACCGACGACCTGTACATTCTGACGGAAGACCACGTCGTCTACAAGGTCATCGAGGAAGGTACCAAGAAGATCAAGGTCAACGAGGCTGAGCATGCTGAGCAAATAGCGCTGGACTGGGATGACAACTTGTACTACATCGGAGCGAACAATCAACCGTATGTTGTCGCTTCGGACGGTGCGAAGAAGATCGAAGGTCTTCCAGCTAACTCAACCTCAGCGGTAATCTCTAGGGCTCCGATCAAGATAGAGCACGGAGCGTGGCTTATGTCCGGACAACAGCCATACGTCATCTATCCCAACGCGACCAGCGAACCATTCGTGTTCAGCGACCAAGAGAAGTTGGAATATGAGAAAAGAAATCGTGATCTTCAAGTTATTTTCTTACAGATGAGGAATCAAACAGAGAAATAA
Protein
MRVLLVCLAGLLVCLKTADSHSLPHKDYETDSSKHYITNPLNDTSGNNSSSVPNNSIRNLDSNTTTFIVRYVTTVDKKEYKGIYAHKNGKVKKILEGGRAVSVWPSKSRAYLGHKDGIYVYDTETEKLEKYGNLSDSIIGIVKENCTDDLYILTEDHVVYKVIEEGTKKIKVNEAEHAEQIALDWDDNLYYIGANNQPYVVASDGAKKIEGLPANSTSAVISRAPIKIEHGAWLMSGQQPYVIYPNATSEPFVFSDQEKLEYEKRNRDLQVIFLQMRNQTEK

Summary

Interpro
IPR015943   WD40/YVTN_repeat-like_dom_sf       
Gene 3D

Ontologies

GO

Topology

SignalP
Position:   1 - 20,         Likelihood:  0.997878
 
 
Length:
282
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01254
Exp number, first 60 AAs:
0.01238
Total prob of N-in:
0.01525
outside
1  -  282
 
 

Population Genetic Test Statistics

Pi
314.363903
Theta
172.94242
Tajima's D
2.44192
CLR
0.180349
CSRT
0.937353132343383
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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