Silkworm Genome Informatics Database

Gene

KWMTBOMO03740

Pre Gene Modal

BGIBMGA010043

Annotation

PREDICTED:_uncharacterized_protein_LOC105842978_[Bombyx_mori]

Location

Bomo_Chr7(+):380159-381086 View in EpiBrowser

Location in the cell

Cytoplasmic Reliability : 1.915

CDS

ATGAGGGGGCTGTTAGTTTGCCTGGCAGGCTTACTGGTCTGCCTGAAGACGGCTGATTCTCACTCATTGCCGCAAAAGGATTACGACGCTGACTCCAACAAACATGACATTACCAATCCACTGGATGACACCAGCGGAAATAATAGCACATCGGTCCCCGACAACTCCAGCGGAATGTTTTATTCTAACATCACAGTTTTCTTCGTGCGTTACGTAACTAGGGGTGACAATAAAGTGGACAAAAGTATATACGCCCACAAGAACGGCAAAGCGAAGAAAGTTTTAGAAGACGGCATGGCTGTCTCATGCTGTTATCTAAAATCGCGCGCCTATTTGGGCAATAAGGACGGTATCTACGTTTACGACACAGAAACAGAGAAGCTTGAGAAGTACGGCAATCTGAGTGACAACGTCATCGGGATCGCAAAAGAGAACCGCACCGACGACCTGTACATTCTGACGGAAGACCACGTCGTCTACAAGGTCATCGAGGAAGGCACCAAGAAGATCAAGGTCAACGAGGCTGAGCATGCTGAGCAAATAGCGCTGGACTGGGATGACAACTTGTATTACATCGGAGCCAACAATCAACCGTATGTTGTCGCTTCGGACGGTGCGAAGAAGATCGAAGGTCTTCCAGCTAATCCAACTTCAGCGTTAATCTCTAAGCCTCCGATCACGATAGAGCACGGAGCGTGGTTGACATTCGGAAAACAGCCCTACATCATCTATCGCAACGCGACCAGCGAACCATACGTATTCAACGACCAAGAGAAGTTGGAACATGAGAAAAGAAATCGTGATCTTGATGTTATTTTCTTACAGTTCAGGAACCAAATAGAGGAATAA

Protein

MRGLLVCLAGLLVCLKTADSHSLPQKDYDADSNKHDITNPLDDTSGNNSTSVPDNSSGMFYSNITVFFVRYVTRGDNKVDKSIYAHKNGKAKKVLEDGMAVSCCYLKSRAYLGNKDGIYVYDTETEKLEKYGNLSDNVIGIAKENRTDDLYILTEDHVVYKVIEEGTKKIKVNEAEHAEQIALDWDDNLYYIGANNQPYVVASDGAKKIEGLPANPTSALISKPPITIEHGAWLTFGKQPYIIYRNATSEPYVFNDQEKLEHEKRNRDLDVIFLQFRNQIEE

Uniprot

H9JKJ2 H9JKJ0 H9JKI9 H9JKJ1 H9JKJ3 H9JY92 + More
H9JKJ4 H9JKJ7 H9JY94 H9JKI5 H9JY93 H9JKJ6 A0A0N1I8U8 I4DNG4 A0A194Q6M8 A0A3S2M2Q9 A0A194Q6N7 A0A212FFR6 A0A212FFS7

Pubmed

19121390 26354079 22651552 22118469

EMBL

BABH01024637 BABH01024628 BABH01024627 BABH01024633 BABH01024639 BABH01042705 + More
BABH01024640 BABH01024642 BABH01042704 BABH01024636 KQ460299 KPJ16156.1 AK402895 BAM19454.1 KQ459386 KPJ01192.1 RSAL01000055 RVE49935.1 KPJ01198.1 AGBW02008773 OWR52581.1 OWR52580.1

Proteomes

UP000005204 UP000053240 UP000053268 UP000283053 UP000007151

PRIDE

H9JKJ2 H9JKJ0 H9JKI9 H9JKJ1 H9JKJ3 H9JY92 + More
H9JKJ4 H9JKJ7 H9JY94 H9JKI5 H9JY93 H9JKJ6

Interpro

IPR015943 WD40/YVTN_repeat-like_dom_sf + More
IPR011047 Quinoprotein_ADH-like_supfam

SUPFAM

SSF50998 SSF50998

Gene 3D

2.130.10.10

ProteinModelPortal

H9JKJ2 H9JKJ0 H9JKI9 H9JKJ1 H9JKJ3 H9JY92 + More
H9JKJ4 H9JKJ7 H9JY94 H9JKI5 H9JY93 H9JKJ6 A0A0N1I8U8 I4DNG4 A0A194Q6M8 A0A3S2M2Q9 A0A194Q6N7 A0A212FFR6 A0A212FFS7

KEGG

101740222 no KO assigned | (RefSeq) uncharacterized LOC101740222

GO

SignalP

Position: 1 - 20, Likelihood: 0.998335

Length:

282

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.03241

Exp number, first 60 AAs:

0.01517

Total prob of N-in:

0.00809

outside

1 - 282

Pi

316.997866

Theta

209.539904

Tajima's D

1.65766

CLR

0

CSRT

0.818609069546523

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree