Silkworm Genome Informatics Database

Gene

KWMTBOMO03738

Pre Gene Modal

BGIBMGA010042

Annotation

PREDICTED:_uncharacterized_protein_LOC105842978_[Bombyx_mori]

Location

Bomo_Chr7(+):356869-357801 View in EpiBrowser

Location in the cell

Cytoplasmic Reliability : 1.352

CDS

ATGAGGGTGCTGTTAGTTTGCCTGGCAGGCTTACTGGTCTGCCTGAAGACGGCTGATTCTCACTCATTGCCGCAAAAGGATTACGAAACTGACTCCAGCAAACATGACATTACCATACCACTGAATGACACCAGCGGAAATAATAGCAGCTCGGTCCCCGACAACTCCAACGGAATCTTTGATTCTAACACAACAACGTTCATCGCGCGCTCCGTAACTAGGGTTGGCAAGAAAGAGTCCATGGGCATCTACGCCCACAAGAACGGTAAAGTGAAAAAAATTTTAGAAGGCAGCATGGCCGTCTCTCCTTGGTCTTCGAAGTCGCGCGCCTATTTGGGCAATAAGGACGGTATCTACGTTTACGACACAGAAACAGAGAAGCTTGAGAAGTACGGCAATCTGAGTGACAACGTCATCGGGATCGCAAAAGAGAACCGCACCGACGACCTGTACATTCTGACGGAAGACCACGTCGTCTACAAGGTCACGGAGGAAGGCACCAAGAAGATCAAGGTCAACGAGGCTGAGCATGCTGAGAGAATAGCGTTAGACTGGGATGACAACTTGTACTACATCGGAGCGAACAATCAACCGTATGTTGTCGCTTCGGACGGTGCGAAGAAGATCGAAGGTCTTCCAGCTAACTCAACCCCAACGTTAATCTCTAGGCCTCCGATCACGATAGAGCACGGAGCGTGGTTTATATCCGGACAACAGGCCTACATCATCTATCCCAACGCGACCAGCGAACTATACGTATTCAACGACCAAGAGAAGCTGGAATATGAGAAAAGAAATCGTGCTGTCCAAGCTATTTTCTTACAAGTGAGGGACCAAACAGAGGAATAA

Protein

MRVLLVCLAGLLVCLKTADSHSLPQKDYETDSSKHDITIPLNDTSGNNSSSVPDNSNGIFDSNTTTFIARSVTRVGKKESMGIYAHKNGKVKKILEGSMAVSPWSSKSRAYLGNKDGIYVYDTETEKLEKYGNLSDNVIGIAKENRTDDLYILTEDHVVYKVTEEGTKKIKVNEAEHAERIALDWDDNLYYIGANNQPYVVASDGAKKIEGLPANSTPTLISRPPITIEHGAWFISGQQAYIIYPNATSELYVFNDQEKLEYEKRNRAVQAIFLQVRDQTEE

Uniprot

H9JKJ1 H9JKI5 H9JKI9 H9JKJ2 H9JY92 H9JKJ3 + More
H9JKJ4 H9JY93 H9JKJ0 H9JKJ6 H9JKJ7 H9JY94 H9JXD8 A0A2H1WA94 A0A0N1I8U8 A0A194Q6N7 A0A0N1IFG5 A0A194Q6N0 A0A212F6C0 A0A0L7LQD5 A0A212FFR6 A0A194QCM9 A0A0N1PGS9 A0A212FFS7

Pubmed

19121390 26354079 22118469 26227816

EMBL

BABH01024633 BABH01024636 BABH01024627 BABH01024637 BABH01042705 BABH01024639 + More
BABH01024640 BABH01042704 BABH01024628 BABH01024642 BABH01043326 ODYU01007026 SOQ49404.1 KQ460299 KPJ16156.1 KQ459386 KPJ01198.1 KPJ16152.1 KPJ01197.1 AGBW02010068 OWR49264.1 JTDY01000338 KOB77634.1 AGBW02008773 OWR52581.1 KPJ01196.1 KPJ16153.1 OWR52580.1

Proteomes

UP000005204 UP000053240 UP000053268 UP000007151 UP000037510

PRIDE

H9JKJ1 H9JKI5 H9JKI9 H9JKJ2 H9JY92 H9JKJ3 + More
H9JKJ4 H9JY93 H9JKJ0 H9JKJ6 H9JKJ7 H9JY94 H9JXD8

Interpro

IPR015943 WD40/YVTN_repeat-like_dom_sf + More
IPR011047 Quinoprotein_ADH-like_supfam

SUPFAM

SSF50998 SSF50998

Gene 3D

2.130.10.10

ProteinModelPortal

H9JKJ1 H9JKI5 H9JKI9 H9JKJ2 H9JY92 H9JKJ3 + More
H9JKJ4 H9JY93 H9JKJ0 H9JKJ6 H9JKJ7 H9JY94 H9JXD8 A0A2H1WA94 A0A0N1I8U8 A0A194Q6N7 A0A0N1IFG5 A0A194Q6N0 A0A212F6C0 A0A0L7LQD5 A0A212FFR6 A0A194QCM9 A0A0N1PGS9 A0A212FFS7

KEGG

105842978 no KO assigned | (RefSeq) uncharacterized LOC105842978

GO

GO:0016021 GO:0005515

SignalP

Position: 1 - 20, Likelihood: 0.997987

Length:

282

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01814

Exp number, first 60 AAs:

0.01177

Total prob of N-in:

0.01042

outside

1 - 282

Pi

494.205651

Theta

227.792148

Tajima's D

3.865298

CLR

0.301021

CSRT

0.998050097495125

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree