Silkworm Genome Informatics Database

Gene

KWMTBOMO03737

Pre Gene Modal

BGIBMGA010041

Annotation

PREDICTED:_uncharacterized_protein_LOC105842978_[Bombyx_mori]

Location

Bomo_Chr7(+):326906-327945 View in EpiBrowser

Location in the cell

Cytoplasmic Reliability : 1.982

CDS

ATGAGGGTGTTGTTAGTTTGTCTGGCAGGCTTACTGGTCTGCCTGAAGACGGCTGATTCTCACTCATTGCCGCAAAAAGATTACGACACTGACTCCAGCAACCATGACATCACCAATCCACTGTATGACACCAGCGGAAATAATAGCAGCTCGGATCCCGACAACTCCAGGGGAATGTTCGATTTTGGCCCCACAACGTTCCTCGTGCACTACGTAACTAGGGATGACAATAAAGAGTATAAAAGTATATACGCCCACAAGAACGGCAAAGCGAAGAAAGTTTTAGAAGACGGCATAGCCGTCTTTGATGAGTTTCCGAAGTCGCGCGCCTATTTGGGCAATAAGGACGGTATCTACATTTACGACACAGAAACAGAGAAGCTTGAGAAGTACGGCAATCTGAGTGACAACGTCATCGGGATCGTAAAAGAAAACCGCACCGACGACCTGTACATTCTGACCGAAGACCACGTCGTCTACAAGGTCACGGAGGAAGGCACCAAGAAGATCAAGGTCAACGAAGCTGAGCATGCCGAGAGAATAGCGTTGGACTGGGATGACAACTTGTACTACATCGGAGCGAACGATCACCCGTATGTTGTGGCATCGGACGGTGCGAAAAAGATCGAAGGTCTTCCAGCTAACCCAACCTCAGTGTTTATCTGTAGGCCTCCGATCAAGATAAAACACGGAGCGTGGTTTATGTCCGGAAAACAGCCCTACATCATCTATCCCAACGCGACCAGCAAACCATACGTATATAACGACCAAGAGAAGCTGGAACACGAGAAAAGAATTCGTGATCTTGATGTTATTTTCTCACAGTTCAGGAACCAAATAGAGGAATGA

Protein

MRVLLVCLAGLLVCLKTADSHSLPQKDYDTDSSNHDITNPLYDTSGNNSSSDPDNSRGMFDFGPTTFLVHYVTRDDNKEYKSIYAHKNGKAKKVLEDGIAVFDEFPKSRAYLGNKDGIYIYDTETEKLEKYGNLSDNVIGIVKENRTDDLYILTEDHVVYKVTEEGTKKIKVNEAEHAERIALDWDDNLYYIGANDHPYVVASDGAKKIEGLPANPTSVFICRPPIKIKHGAWFMSGKQPYIIYPNATSKPYVYNDQEKLEHEKRIRDLDVIFSQFRNQIEE

Uniprot

H9JKJ0 H9JKJ2 H9JKJ7 H9JY94 H9JKJ3 H9JKI9 + More
H9JKJ1 H9JY92 H9JKI5 H9JKJ4 H9JKJ6 H9JY93 A0A2W1BQC8 A0A2H1WA94 A0A3S2M2Q9 A0A0N1I8U8 A0A2A4J2F8 I4DNG4 A0A194Q6M8 A0A0N1IFG5 A0A194Q6N0

Pubmed

19121390 28756777 26354079 22651552

EMBL

BABH01024628 BABH01024637 BABH01024642 BABH01042704 BABH01024639 BABH01024627 + More
BABH01024633 BABH01042705 BABH01024636 BABH01024640 KZ149980 PZC75824.1 ODYU01007026 SOQ49404.1 RSAL01000055 RVE49935.1 KQ460299 KPJ16156.1 NWSH01003616 PCG66049.1 AK402895 BAM19454.1 KQ459386 KPJ01192.1 KPJ16152.1 KPJ01197.1

Proteomes

UP000005204 UP000283053 UP000053240 UP000218220 UP000053268

PRIDE

H9JKJ0 H9JKJ2 H9JKJ7 H9JY94 H9JKJ3 H9JKI9 + More
H9JKJ1 H9JY92 H9JKI5 H9JKJ4 H9JKJ6 H9JY93

Interpro

IPR015943 WD40/YVTN_repeat-like_dom_sf

Gene 3D

2.130.10.10

ProteinModelPortal

H9JKJ0 H9JKJ2 H9JKJ7 H9JY94 H9JKJ3 H9JKI9 + More
H9JKJ1 H9JY92 H9JKI5 H9JKJ4 H9JKJ6 H9JY93 A0A2W1BQC8 A0A2H1WA94 A0A3S2M2Q9 A0A0N1I8U8 A0A2A4J2F8 I4DNG4 A0A194Q6M8 A0A0N1IFG5 A0A194Q6N0

KEGG

101739948 no KO assigned | (RefSeq) uncharacterized LOC101739948

GO

GO:0016021 GO:0005515

SignalP

Position: 1 - 20, Likelihood: 0.997440

Length:

282

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01261

Exp number, first 60 AAs:

0.01191

Total prob of N-in:

0.01063

outside

1 - 282

Pi

408.986249

Theta

205.652258

Tajima's D

3.112519

CLR

0.44647

CSRT

0.981500924953752

Interpretation

Possibly Balancing Selection

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree