SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03736
Pre Gene Modal
BGIBMGA010040
Annotation
PREDICTED:_uncharacterized_protein_LOC105842978_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 1.018
 

Sequence

CDS
ATGAGGGTGCTGTTAGTTTGCCTGGCAGGCTTACTGGTCTGCCTGAAGACGGCTGATTCTCACTCATTGCCGCAAAAGGATTACGACACTGACTCCAGCAAACCTGACATTACCAATCCACTGAATGACACCAGCGGAAATAATAGCAGCTCGGTCCCCGACAACTCCAGCGGAATCTTTGATTCTAACACCACAATATTCATCGTGCGTTACGTAACTAGGGGTGACAAGAAAGAGTACAAGGGTATATACGCCCACAAGAACGGCAAAGTGAAAAAAATCTTAGTAGGCGGCAGGGCCTTCTCAGATTGGTTTTCGAAGTCACGCGCCTATTTGGGCCATAAGGACGGTATCTACGTTTACGACACAGAAACAGAGAAGCTTGAGAAGTACGGCAATCTGAGTGACAGCATCATCGGGATCTTAAAAGAGAACCGCACCGACGACCTGTACATTCTGACGGAAGACCACGTCGTCTACAAGGTCATCGAGGAAGGCACCAAGAAAATCAAAATCAACGAAGCTGAGCATGCTGAGCAAATAGCGCTGGACTGGGATGACAACTTGTACTACATCGGAGCGAACAATCAACCGTATGTTGTCACTTCGGACGGTGCGAAGAAGATCGAAGGTCTTCCAGCTAATCCAACCTCAGCGTCGTTCTCTAGGGCTCCAATCACGACAGAACATAGATCCTGGTTTATGTCCGGAAAACAGCCGTACATCATCTATCCCAATGCGACCAGCGAACCATACGTATTCAACGACCAAGAGAAGTTGGAATATGAGAAAAGAATTCGTGCTCTCCAACTTATTTTCTTACAATTGAGGAATCAAGCAGAGGAATAA
Protein
MRVLLVCLAGLLVCLKTADSHSLPQKDYDTDSSKPDITNPLNDTSGNNSSSVPDNSSGIFDSNTTIFIVRYVTRGDKKEYKGIYAHKNGKVKKILVGGRAFSDWFSKSRAYLGHKDGIYVYDTETEKLEKYGNLSDSIIGILKENRTDDLYILTEDHVVYKVIEEGTKKIKINEAEHAEQIALDWDDNLYYIGANNQPYVVTSDGAKKIEGLPANPTSASFSRAPITTEHRSWFMSGKQPYIIYPNATSEPYVFNDQEKLEYEKRIRALQLIFLQLRNQAEE

Summary

Interpro
IPR015943   WD40/YVTN_repeat-like_dom_sf        + More
IPR011047   Quinoprotein_ADH-like_supfam       
SUPFAM
SSF50998   SSF50998       
Gene 3D

Ontologies

GO

Topology

SignalP
Position:   1 - 20,         Likelihood:  0.997938
 
 
Length:
282
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01381
Exp number, first 60 AAs:
0.01317
Total prob of N-in:
0.01051
outside
1  -  282
 
 

Population Genetic Test Statistics

Pi
302.941576
Theta
196.468012
Tajima's D
1.786715
CLR
0
CSRT
0.849507524623769
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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