SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03731
Pre Gene Modal
BGIBMGA010040
Annotation
PREDICTED:_uncharacterized_protein_LOC105842978_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 1.152
 

Sequence

CDS
ATGAGGGTGCTGTTAGTTTGCCTGGCAAGCTTACTGGTCTGCCTGAAGACGGCTGAACCTCACTCATTGCCGCAAAAGGATTACGACACCGACTCCAGCAAACATGACATTACCGATCCACTGAATGACACCAGCGGAAATAATAGCAGCTCGGTCCCCGACAACACCAGCGGAATCTTTGATTCTAAAACCACAATATTAATCCTGCGTTACGTAACTACGGGTGACAAGAAAGAGTTCAAGGGTATATACGCCCACAAGAACGGCAAAGTGAAAAAAATTTTAGCAGGCGGCAGGGCCGTCTCAGATTGGTTTTCGAAGTCACGCGCCTATTTGGGCAATAAGGACGGTATCTACGCTTACGACACAGAAACAGAGAAGCTTGAGAAGTACGGCAATCTGAGTGACAGCATCATCGGGATCTTAAAAGAGAACCGCACTGACGACCTGTACATTCTGACGGAAGACCACGTCGTCTACAAGGTCACGGAGGAAGGCACCAAGAAAGTCAAAGTCAACGAAGCTGAGCATGCTGAGCAAATAGCGCTGGACTGGGATGACAACTTGTACTACATCGGAGCGAACAATCAACCGTATGTTGTCACTTCGGACGGTGCGAAGAAGATCGAAGGTCTTCCAGCTAATCCAACCTCAGCCTCGTTCTCTAGGGCTCCAATCACGACAGAACATAGATCCTGGTTTATGTCCGGAAAACAGCCCTACATCATCTATCGCAACGCGACCAGCGAACCATACGTATTCAACGACCAAGAGAAGTTGGAATATGAGAAAAGAATTCGTGCTCTCCAACTTATTTTCTTACAGTTGAGGAATCAAGCAGAGGAATAA
Protein
MRVLLVCLASLLVCLKTAEPHSLPQKDYDTDSSKHDITDPLNDTSGNNSSSVPDNTSGIFDSKTTILILRYVTTGDKKEFKGIYAHKNGKVKKILAGGRAVSDWFSKSRAYLGNKDGIYAYDTETEKLEKYGNLSDSIIGILKENRTDDLYILTEDHVVYKVTEEGTKKVKVNEAEHAEQIALDWDDNLYYIGANNQPYVVTSDGAKKIEGLPANPTSASFSRAPITTEHRSWFMSGKQPYIIYRNATSEPYVFNDQEKLEYEKRIRALQLIFLQLRNQAEE

Summary

Interpro
IPR015943   WD40/YVTN_repeat-like_dom_sf        + More
IPR011047   Quinoprotein_ADH-like_supfam       
SUPFAM
SSF50998   SSF50998       
Gene 3D

Ontologies

Topology

SignalP
Position:   1 - 20,         Likelihood:  0.995998
 
 
Length:
282
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00662999999999999
Exp number, first 60 AAs:
0.00649
Total prob of N-in:
0.01280
outside
1  -  282
 
 

Population Genetic Test Statistics

Pi
325.678912
Theta
214.186296
Tajima's D
1.424305
CLR
0
CSRT
0.772961351932403
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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