SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03728
Pre Gene Modal
BGIBMGA010038
Annotation
PREDICTED:_adenosine_3'-phospho_5'-phosphosulfate_transporter_1_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 4.51
 

Sequence

CDS
ATGCGATCGAATGTCATAATTTGGGTAGTGATAGCATCATGCATCCTGCTGATGTGGTTGATTGGTCGACTTTACCACGAACTTCTGTATGCCTATGAACAGTCCAGCACACTAACAAATATAGAGTATTCATGGTTGTTCCGGCTGCTGTTAAACGTTACTGGGTACTCAACGATACTGGTACCTGGATTCATACTTTACAAATATCTACATAAAATTAATTATTTCCAAAAAATAACGAATCCATCGTGTTTATCTCGTTGTCTGCAAGCTATTTTCGGTGAATGGGACGACAGGATACCAGATCCCGCAAAGCCTTCGAAGGTCGAAGGGGAAAAACGTAAAGATAGCATTGAACTGTTGTTCTGTTTCACCGGACTCATGGGTGCTTATCTAGTCTGGGGATTGTTGCAGGAGAAAATTATGACACAGAAGTACGTGATGCCGGACGGGTCCACGGCGCGGTTCAGCGACTCGCAGCTGCTGGTGTTCGTGAACCGGCTGGTGGCGCTGGCGGTGGCGGCGCTGCGGCTGCGCGCGTCGGGCCGGGCGCTGCTGGGGGGCCCGCTCTACCCCTTCTCCTACAGCGCGCTCACCAACGTGCTCAGCGCCTGGTGCCAGTACGAGGCGCTCAAGTACGTCAGCTTCCCGGTGCAGGTGCTGTCCAAGTCGTGCAAGGTGATCCCGGTGATGCTGATGGGGGCGGTGCTGTCCCGGCACAAGTACTCGCGCGCGGAGTGGGGCACCGCCGCGCTCATCTCCCTGGGCATGGCGCTCTTCCTGCTGGGGACCGGGGCCGCCGTGCAAGGCGCGCGCGGGGCGGGGGGCGCGGCGGGTGCGGCGGCGGCGGGTGCGGCGGCGGGCGCCGCGTCGGGCGCGTGCCTGCTGGCGCTGTACCTGTGCTGCGACTCGTTCACGTCGTCGTGGCAGGCGGCGCTGTTCGCGCGCGGCGGGGTGTCGGCGCTGCAGATGCTGTGCGCCGTGAACTGCTGCAGCTGCGCGCTGTCGGCCGCCGCGCTGCTGCAGGCGCCCGCGCTGTCCGCCGCCGCGCGCTTCCTGCAGAGCCCGGTGTTCGCGGCCGACTGCCTCGTGCTGTCGCTGAGCTCGGCGCTGGGGCAGCTCTTCATCTACCGGACGATATTCAAGTTCGGAGCCGTCGTCTTCACCATCATCATGACCCTGAGACAGGCCGCGTCCGTGCTGCTGTCGTGCGCCGTGTACGGGCACGCCGTGTCGGGGCCGGCCGCGGCGGGCGTGCTGCTCGTGTTCGCCGCCCTCGCGCTGCGCCTCTACTGCAAGCAGCGGGCTCCCCGCGCGCCCCCCGCCGCCGCCGCGCTCTAG
Protein
MRSNVIIWVVIASCILLMWLIGRLYHELLYAYEQSSTLTNIEYSWLFRLLLNVTGYSTILVPGFILYKYLHKINYFQKITNPSCLSRCLQAIFGEWDDRIPDPAKPSKVEGEKRKDSIELLFCFTGLMGAYLVWGLLQEKIMTQKYVMPDGSTARFSDSQLLVFVNRLVALAVAALRLRASGRALLGGPLYPFSYSALTNVLSAWCQYEALKYVSFPVQVLSKSCKVIPVMLMGAVLSRHKYSRAEWGTAALISLGMALFLLGTGAAVQGARGAGGAAGAAAAGAAAGAASGACLLALYLCCDSFTSSWQAALFARGGVSALQMLCAVNCCSCALSAAALLQAPALSAAARFLQSPVFAADCLVLSLSSALGQLFIYRTIFKFGAVVFTIIMTLRQAASVLLSCAVYGHAVSGPAAAGVLLVFAALALRLYCKQRAPRAPPAAAAL

Summary

EMBL
RSAL01000013    RVE53417.1    GDQN01005273    JAT85781.1    NWSH01003491    PCG66191.1    + More
KQ459167    KPJ03432.1    KZ149996    PZC75410.1    AGBW02009154    OWR51532.1    KK853280    KDR09040.1    KK854273    PTY14066.1    NEVH01018377    PNF23607.1    GEBQ01022094    JAT17883.1    DS232517    EDS42946.1    CH477355    EAT42825.1    JXUM01018446    KQ560513    KXJ82044.1    JXUM01083127    KQ563358    KXJ73986.1    GECU01019949    JAS87757.1    GECZ01023303    GECZ01018752    JAS46466.1    JAS51017.1    GBHO01027396    GBHO01027395    GBHO01027394    GBRD01016514    JAG16208.1    JAG16209.1    JAG16210.1    JAG49312.1    GFDL01010781    JAV24264.1    GANO01001907    JAB57964.1    GBBI01000987    JAC17725.1    ACPB03006985    GAHY01001634    JAA75876.1    GEZM01023284    JAV88526.1    ATLV01026105    KE525406    KFB52838.1    GFTR01006223    JAW10203.1    AAAB01008859    EAA08064.4    CVRI01000047    CRK97715.1    APCN01000311    GBGD01001507    JAC87382.1    KQ981866    KYN34080.1    KQ978530    KYN30317.1    AJWK01014015    AJWK01014016    KQ976488    KYM83521.1    GL888128    EGI66733.1    ADTU01019255    QCYY01000297    ROT85365.1    ADMH02002163    ETN58150.1    GGFK01009922    MBW43243.1    AJVK01011536    AJVK01011537    GGFK01010003    MBW43324.1    KQ982320    KYQ57730.1    AXCM01000618    GBYB01004541    JAG74308.1    AXCN02000002    AAKN02021391    KT754322    ALS04156.1    AAZX01002217    GBKD01000012    JAG47606.1    KQ434809    KZC06414.1    GL438389    EFN69016.1    NNAY01003689    OXU19004.1    MWRG01009329    PRD27157.1    KB600878    EMP24484.1    KK107111    QOIP01000011    EZA58893.1    RLU16979.1    HAEB01008418    HAEC01008693    SBQ54945.1    AMGL01058702    HAED01008444    HAEE01007134    SBQ94656.1    CYRY02001614    VCW66244.1    HADW01004555    HADX01006697    SBP05955.1    HADZ01022251    SBP86192.1    HAEH01002775    HAEI01005394    SBR93102.1    HAEF01009203    HAEG01016593    SBR48049.1    HADY01005844    HAEJ01007195    SBS47652.1    BC103464    AAI03465.1    ADON01046934    ADON01046935    ADON01046936    MUZQ01000067    OWK60067.1    CM001256    EHH18377.1    KL761273    KFW88954.1    BDOT01000115    GCF51860.1    JARO02003314    KPP70749.1    JU320233    JU471876    JV044776    AFE63989.1    AFH28680.1    AFI34847.1    LWLT01000028   
Pfam
PF08449   UAA
Interpro
IPR013657   UAA        + More
IPR023298   ATPase_P-typ_TM_dom_sf       
SUPFAM
SSF81665   SSF81665       

Ontologies

Topology

Length:
446
Number of predicted TMHs:
7
Exp number of AAs in TMHs:
207.49272
Exp number, first 60 AAs:
35.12808
Total prob of N-in:
0.80673
POSSIBLE N-term signal
sequence
outside
1  -  4
TMhelix
5  -  24
inside
25  -  44
TMhelix
45  -  67
outside
68  -  117
TMhelix
118  -  137
inside
138  -  246
TMhelix
247  -  269
outside
270  -  278
TMhelix
279  -  301
inside
302  -  373
TMhelix
374  -  396
outside
397  -  405
TMhelix
406  -  428
inside
429  -  446
 
 

Population Genetic Test Statistics

Pi
304.926479
Theta
192.343908
Tajima's D
1.608564
CLR
0.292932
CSRT
0.810709464526774
Interpretation
Uncertain
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