SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03725
Annotation
putative_G_protein-coupled_receptor_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 4.717
 

Sequence

CDS
ATGCAAGTAACGTACTACGTGATCCGGATGGCGCTGCTGCTGTCCTGGCTCTGGGCGGCGCTGCTGACGTGCGCGCCCGTGTTCGGTCTGGGGCTGTACTACGACCCCCGGCGCGGGAAGTGCCTGCGCTACAGGGAAGCGCAGTCCGCGACTGACTTCGCCTATGCTATCATCTACGTTATCTTTGGAACCCTCCTCTGCGTAATCCTGGTGTACTGCAATCTCGCAGTGATCAGAGCATTGTACGCGATCACGGCGCCGCGTGCCGGGGGGCAGCCGGTCGTCAGACGGGTGTCCAAGAGCAGCTGCAGACAGCGACAGCGAAGCCTCAACTCCGGAAACAACCTGCAGTCTATGAACCACAACGCAGCCACGGCTGAGGAGGTGGCTTTCAGTAGACTCATGGCGACGCTTTCGGTGCTGTTCATGATATGCTGGCTACCGCAATTGGTGACTTCGGCTCTGTACTTGTCGCTGGGCCCGCCCGCGTGGCCGCGGCTGGGTCTGCTAGGCGATCTGTCCGATGTCCTGATGCTGCTCAACTACGTGCTCAATCCCATATTGTACGTGCTCATGAGGCAACGTCGAAGAGTATCTCCCTCCACTCTGTGTCACAGCATCGCGCATTGTTTTAAGAGGAGTCACAAGAGATCAACAGAGTCAGTGTCGATGAAAACATCGTGTTGCCCACAAGAGACGGTGATGGTGAGCGACAGTTCTGGCGCGGAGATGCGACCTCTGCGCGGGCACGCTGACAACACCGCGCCCCTGCTCACACCCACACCTCACATCATCAAACTAGAAGACTAG
Protein
MQVTYYVIRMALLLSWLWAALLTCAPVFGLGLYYDPRRGKCLRYREAQSATDFAYAIIYVIFGTLLCVILVYCNLAVIRALYAITAPRAGGQPVVRRVSKSSCRQRQRSLNSGNNLQSMNHNAATAEEVAFSRLMATLSVLFMICWLPQLVTSALYLSLGPPAWPRLGLLGDLSDVLMLLNYVLNPILYVLMRQRRRVSPSTLCHSIAHCFKRSHKRSTESVSMKTSCCPQETVMVSDSSGAEMRPLRGHADNTAPLLTPTPHIIKLED

Summary

Similarity
Belongs to the G-protein coupled receptor 1 family.
EMBL
KT449429    ALU85891.1    ODYU01001517    SOQ37844.1    AGBW02009154    OWR51528.1    + More
KZ149996    PZC75431.1    NWSH01003093    PCG66957.1    KY012737    AQT27341.1    KQ460938    KPJ10684.1    JTDY01004134    KOB68541.1    AXCM01006311    ADMH02002183    ETN57974.1    AXCN02001151    GAMC01002131    JAC04425.1    GBBI01002125    JAC16587.1    ACPB03019876    APCN01000883    AAAB01008987    EAA01299.2    ATLV01003739    ATLV01003740    KE524159    KFB34970.1    JXUM01053456    JXUM01053457    JXUM01053458    JXUM01053459    KQ561777    KXJ77577.1    GL436875    EFN71431.1    KQ434849    KZC08523.1    KQ978081    KYM97098.1    GBXI01007302    JAD06990.1    KQ981856    KYN34463.1    KQ983045    KYQ47908.1    JRES01001077    KNC25713.1    KQ761164    OAD58108.1    DS232059    EDS33482.1    GL888624    EGI58915.1    GAMC01010630    JAB95925.1    ADTU01017957    KQ976490    KYM83400.1    GDHF01002782    JAI49532.1    GAKP01007260    JAC51692.1    KQ978782    KYN28458.1    GBXI01014790    JAC99501.1    OUUW01000009    SPP84990.1    CH940647    EDW69160.1    NNAY01003300    OXU19657.1    GBYB01003586    GBYB01003865    GBYB01007507    JAG73353.1    JAG73632.1    JAG77274.1    GGMR01005789    MBY18408.1    CM000159    EDW94698.1    CH479188    EDW40410.1    CH379069    EAL30960.1    CM002912    KMZ00280.1    CH954178    EDV51945.1    AE014296    AAF49320.3    AHN58125.1    AY058468    AAL13697.1    CP012525    ALC42979.1    JH431114    CH964095    EDW79009.2    CH933809    EDW17919.1    CH902618    EDV40502.1    APGK01039111    KB740967    ENN76826.1   
Pfam
PF00001   7tm_1
Interpro
IPR008365   Prostanoid_rcpt        + More
IPR000276   GPCR_Rhodpsn       
IPR017452   GPCR_Rhodpsn_7TM       

Ontologies

Topology

Length:
269
Number of predicted TMHs:
4
Exp number of AAs in TMHs:
88.60349
Exp number, first 60 AAs:
29.17019
Total prob of N-in:
0.99960
POSSIBLE N-term signal
sequence
inside
1  -  11
TMhelix
12  -  34
outside
35  -  53
TMhelix
54  -  76
inside
77  -  137
TMhelix
138  -  160
outside
161  -  174
TMhelix
175  -  192
inside
193  -  269
 
 

Population Genetic Test Statistics

Pi
213.082983
Theta
171.346027
Tajima's D
0.702744
CLR
0.996965
CSRT
0.565271736413179
Interpretation
Uncertain
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