Gene
KWMTBOMO03713
Pre Gene Modal
BGIBMGA002746
Annotation
PREDICTED:_collagen_alpha_chain_CG42342-like_isoform_X5_[Papilio_xuthus]
Location in the cell
Nuclear Reliability : 2.515
Sequence
CDS
ATGATTCCAGGTCCTCCAGGCCCTCCTGGCAAGAGAGGGAAGAAAGGCAAAAAGGGAGACCCGGGCGAGCCCGGACCTTCGGGGTTGACGGGAGCGCCGGGGAAGAATGGATTCCCGGGACCAATTGGATTAGACGGACCAAAAGGCGATCCGGGTCGACCCGGTGACAAGGGCCAGAAGGGCGAGCACGGGAGCCCAGGCTTCGACGTATTCTCAGCCGTCAAGGGCGTCAAAAGATCAGTGGACAACTTTAAGATAAGTCCGTACACAACGGCAGAGATTATTGCAGTGAAGGGAGAGCCAGGTGAACCAGGTCCTCCGGGGCCACCGGGGCCCCAGGGCGGCGAGGGTCTACCCGGACACGATGGACGCGGGGGTCCGCCCGGTCCCCCTGGCCCTGCTGGTACATCCGGCCCACCCGGACCCACGGGACCCGTAGGACCACCGGGCCCGCCCGGACCACTAGGACATAAGGGTGATAAGGGAAATAAAGGCGAACGGGGATTTACGACGACGTTGAAAGGAGATTCATTTCCCACCGGCATCATCGAGGGACCTCCGGGACCCCCCGGACCCCCCGGTCGCACAGGCGAGGCGGGTCCGCGCGGCCCCCCCGGAGCGGATGGCGCCCCGGGACTAGCTGGGGTTCCCGGCCCCCCTGGAAAGCCGGGTGAGCCGGGACCTAAGGGTGGCAAGGGTGAATATGGAGACATGGGTTCTCCGGGTATGCTGGGAGCCCCGGGACTACCTGGCCCGCCTGGTTACCCGGGCCTTAAGGGTGAAAAGGGCGACAAGGGAGATTCGAAGTACAGGAAGCTGAGAAGAAGGCAGGGAGACGGCACCGGCTACGAGCTCTACGGACACGACATGATGTTGGGACCGCCGGGGCCGCCGGGACCGTCGGGGCCCCCCGGGGTGGCGGGCCCGCCCGGGATCAAAGGCGACAAGGGGGAGCCTGGCATCCGGGGCAAGGCGGGCGATCGAGGAGAAAAAGGAGATGCTGGCCCTATGGGACTACCCGGACCGGTCGGGCTGCCGGGTGAGCCGGGCAGGCCGGGAGACTCGGGCCGCCGGTGCACACGTGTATATTGGTTGTCTGATCCCGCGCAGGGCGCACAAGGCGAGCCCGGCTCCAAGGGGGAGCGCGGCGACCCCGGCCTGCCGGGAACTGACGGTATTCCCGGTCAAGAGGGTCCGAAGGGCGACAAAGGCTACAAGGGGGAGCCAGGCCCGGTCGGCAAGCGCGGCAGGAAGGGCGACAAGGGCGACAAGGGCGAGCAGGGCGTGCCGGGGCTGGACGCGCCCTGCCCGCTGGGACACGACGGCCTGCCCCTGCCCGGCTGCGGCTGGAGACCCAACAAGGAGTCGGTGCCGCTGCTGCCGCCGCGCGAGGGTGAGGCCGCGGGGGCGGGCGCGGGGGGAGAGCGCTCCGAGGAGGAGGACGAGGAGCCCGCGGAGGAGTACGAGGGACGCGAGGACGAGCTAGAGGCGCCGCGCGACTACGACGACTACACTGACAACTCGCATCTAACGCACCATCACGACTAA
Protein
MIPGPPGPPGKRGKKGKKGDPGEPGPSGLTGAPGKNGFPGPIGLDGPKGDPGRPGDKGQKGEHGSPGFDVFSAVKGVKRSVDNFKISPYTTAEIIAVKGEPGEPGPPGPPGPQGGEGLPGHDGRGGPPGPPGPAGTSGPPGPTGPVGPPGPPGPLGHKGDKGNKGERGFTTTLKGDSFPTGIIEGPPGPPGPPGRTGEAGPRGPPGADGAPGLAGVPGPPGKPGEPGPKGGKGEYGDMGSPGMLGAPGLPGPPGYPGLKGEKGDKGDSKYRKLRRRQGDGTGYELYGHDMMLGPPGPPGPSGPPGVAGPPGIKGDKGEPGIRGKAGDRGEKGDAGPMGLPGPVGLPGEPGRPGDSGRRCTRVYWLSDPAQGAQGEPGSKGERGDPGLPGTDGIPGQEGPKGDKGYKGEPGPVGKRGRKGDKGDKGEQGVPGLDAPCPLGHDGLPLPGCGWRPNKESVPLLPPREGEAAGAGAGGERSEEEDEEPAEEYEGREDELEAPRDYDDYTDNSHLTHHHD
Summary
Uniprot
ProteinModelPortal
Ontologies
GO
Topology
Length:
515
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00006
outside
1 - 515
Population Genetic Test Statistics
Pi
5.34517
Theta
5.364402
Tajima's D
-0.773428
CLR
0.198135
CSRT
0.184090795460227
Interpretation
Uncertain
