Gene

KWMTBOMO03712

Annotation

PREDICTED:_uncharacterized_protein_LOC105389963_[Plutella_xylostella]

Location

Bomo_Chr6(-):16379305-16380582      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.602

CDS

ATGGGTAACTTATCAAAAGAGAGACTTGAAATAGAACCATCGGGGTCAGGTTTTCCATTTTTTAGATGTGGAGTAGATTATGCGGGGCCAATGTTTATACTCAACCGCAAAGGAAGAGGTGCTAAATTAGAAAAATGTTACATTAATTTAATCGTTTGTTTTCTCACTCGCTCGGTATATTTGGATTTGGTCACATCATTAACGACTCAAGCGTACATACTTGCACTTAAAAGGTTCATTTCTAGACGTGGGAAACCATTTCAAATTTTCTCGGACAATGCTAAAACTTTTGTGGGTGCTATGAAGGAATTTTCACAATTCTTGACAGAAAACTCCAAGGAAATTGTCTCGCTAGCAGCCAACGACAACATTAATTTGTCTTTTATACCGCCTTATTCGCCTCATTTTGGTGGTTTATGGGAGGCGGGAGTGAAGTCTTGTAAGCATCACCTACGACGAGTTGTAGGTAATTCACACTTAACGTACGAGGAATTCAGCACGGTATTGGCACAGATAGAAGCCGTCCTGAATTCCCGTCCTATACATCCAATGTCCGCAGATCCAAACGATCTTCGTCCACTCAGCCCTGGTCATTTCCTCATCGGCCGACCGTTGACTGCACCAGCCTGCAGCGACCTCACGGCGACGGCATCACACCGACTGACGCGCTACGATCGAGTGGAACAAATCCGACAACAATTTTGGCAGAGGTGGTCTAAGGAGTACATATCCGAATTGCAGACGAGAACTAAATGGAAAACGGACAAGGAAGACATCGTACCGAACACCCTGGTCCTAATCAAAGAAGACAACCTGCCGCCACTCAAATGGCGTCTTGGACGAGTGCAGCAAACATTTCCTGGCAAGGACGGCATATCCCGAGTAGCTAACCTCAAAACGGCGACTGGGATTGTACAGCGGGCATACTCAAAAATCTGCCCACTCTTACATAATGCAGAGGACTACAACGAGAGTCTCACAACACACACATCGTAA

Protein

MGNLSKERLEIEPSGSGFPFFRCGVDYAGPMFILNRKGRGAKLEKCYINLIVCFLTRSVYLDLVTSLTTQAYILALKRFISRRGKPFQIFSDNAKTFVGAMKEFSQFLTENSKEIVSLAANDNINLSFIPPYSPHFGGLWEAGVKSCKHHLRRVVGNSHLTYEEFSTVLAQIEAVLNSRPIHPMSADPNDLRPLSPGHFLIGRPLTAPACSDLTATASHRLTRYDRVEQIRQQFWQRWSKEYISELQTRTKWKTDKEDIVPNTLVLIKEDNLPPLKWRLGRVQQTFPGKDGISRVANLKTATGIVQRAYSKICPLLHNAEDYNESLTTHTS

Uniprot

A0A3S2P7Y4   A0A0N0PBK0   S4PWG7   A0A2A4JM97   A0A2A4JBY8   A0A1Y1KBX1   + More
A0A1Y1MWL6   A0A194RAG7   A0A194RGQ8   A0A1Y1MY22   A0A151K1X2   A0A0J7KLR0   A0A194QJ48   A0A0A9VWY7   A0A0A9WEH4   A0A3S2NVW9   A0A1Y1LN53   A0A0N1I390   A0A151IPF9   A0A0V0GCF2   A0A2L2YR37   A0A1Y1L2Y2   A0A0J7NFF3   A0A0N1IBH6   A0A2S2P0T8   A0A3L8DC69   A0A0J7KE03   D6X1G6   A0A2L2YW58   A0A151JRY2   A0A151I9J7   A0A182GKL8   A0A151JQ29   E9J9Y8   A0A139W8E1   A0A182GDY6   V5FWW0   A0A1Y1L369   A0A0J7K7S0   A0A224XNG8   A0A182GUJ7   A0A0L7QJG1   A0A151J2Q1   A0A1B6EB86   A0A2S2P7L7   A0A194RI04   A0A2W1BII4   A0A2L2YLT6   A0A182G8P0   A0A0J7KDW6   A0A2S2PNZ4   A0A1Y1N6J9   A0A0J7KFV3   A0A151K236   A0A2S2PI44   A0A2L2YNC9   A0A2S2PUJ2   A0A151J2Q3   A0A151JA43   A0A151IGU0   A0A182G7L0   A0A0J7KBV8   A0A0L7QYD7   A0A151ICQ0   A0A0L7RFP1   A0A2A4IUY1   A0A0J7JZS0   A0A0J7JZ44   A0A0J7KD18   A0A1B6CM38   A0A0J7KD57   A0A0A9Z2M8   A0A226CW75   A0A2A4IUL3   E2ARC4   J9K774   A0A1Y1MD76   J9LHB7   D7GYB7   A0A1Y1M979   A0A151IZU4   A0A069DYA1   A0A151IJA6   A0A226CWA5   A0A226DMG9   A0A226EPI5   A0A151IAB8   A0A3L8D4B7   A0A226E226   X1XU48   X1XMQ5   A0A0A9YD88   A0A026WMA2   A0A023EZK8   A0A2S2PTX9   A0A226EUF5   X1XH24   A0A2S2P1P0   A0A023EZB2   J9JT64  

Pubmed

26354079    23622113    28004739    25401762    26561354    30249741    + More
18362917    19820115    26483478    21282665    28756777    20798317    26334808    24508170    25474469   

EMBL

RSAL01000222    RVE44041.1    KQ460970    KPJ10166.1    GAIX01006818    JAA85742.1    + More
NWSH01001014    PCG73111.1    NWSH01001945    PCG69607.1    GEZM01086715    GEZM01086714    JAV59022.1    GEZM01018697    JAV90052.1    KQ460500    KPJ14270.1    KQ460211    KPJ16510.1    GEZM01018702    JAV90048.1    LKEX01009270    KYN50062.1    LBMM01005768    KMQ91222.1    KQ458793    KPJ04955.1    GBHO01042877    JAG00727.1    GBHO01037808    JAG05796.1    RSAL01000052    RVE50155.1    GEZM01052807    JAV74268.1    KQ459256    KPJ02096.1    KQ976863    KYN07859.1    GECL01000456    JAP05668.1    IAAA01044800    LAA09890.1    GEZM01068861    GEZM01068860    JAV66730.1    LBMM01005719    KMQ91270.1    KMQ91271.1    KQ459312    KPJ01687.1    GGMR01010464    MBY23083.1    QOIP01000010    RLU18065.1    LBMM01009062    KMQ88421.1    KQ971371    EFA09479.1    IAAA01066606    LAA12316.1    KQ978591    KYN29960.1    KQ978276    KYM95705.1    JXUM01245428    KQ636870    KXJ62407.1    KQ978749    KYN28625.1    GL769615    EFZ10365.1    KQ973442    KXZ75531.1    JXUM01161881    KQ574228    KXJ67877.1    GALX01006326    JAB62140.1    GEZM01066272    JAV68024.1    LBMM01012392    KMQ86241.1    GFTR01005058    JAW11368.1    JXUM01175059    KQ581415    KXJ62573.1    LHQN01026481    KOC58676.1    KQ980379    KYN16310.1    GEDC01002296    GEDC01002113    JAS35002.1    JAS35185.1    GGMR01012733    MBY25352.1    KQ460205    KPJ16960.1    KZ150101    PZC73504.1    IAAA01034021    IAAA01034022    LAA09083.1    JXUM01152425    KQ571452    KXJ68173.1    LBMM01009098    KMQ88394.1    GGMR01018506    MBY31125.1    GEZM01013857    JAV92285.1    LBMM01008181    KMQ89076.1    LKEX01009172    KYN50051.1    GGMR01016490    MBY29109.1    IAAA01031867    LAA09638.1    GGMR01020500    MBY33119.1    KQ980343    KYN16364.1    KQ979340    KYN21881.1    KQ977667    KYN00648.1    JXUM01150485    KQ571012    KXJ68260.1    LBMM01009941    KMQ87772.1    KQ414692    KOC63602.1    KQ978021    KYM98106.1    KQ414603    KOC69644.1    NWSH01006923    PCG63188.1    LBMM01018894    KMQ83668.1    LBMM01019751    KMQ83463.1    LBMM01009284    KMQ88247.1    GEDC01022769    JAS14529.1    LBMM01009442    KMQ88136.1    GBHO01005508    GBHO01005504    JAG38096.1    JAG38100.1    LNIX01000063    OXA37199.1    PCG63186.1    GL442026    EFN64015.1    ABLF02023723    GEZM01039657    JAV81297.1    ABLF02022040    ABLF02056888    GG695382    EFA13346.1    GEZM01039858    JAV81140.1    KQ980665    KYN14636.1    GBGD01000063    JAC88826.1    KQ977375    KYN03201.1    LNIX01000069    OXA36894.1    LNIX01000016    OXA46198.1    LNIX01000002    OXA59522.1    KQ978265    KYM95834.1    QOIP01000014    RLU14853.1    LNIX01000007    OXA51795.1    ABLF02018371    ABLF02043851    GBHO01020765    GBHO01014531    JAG22839.1    JAG29073.1    KK107156    EZA56791.1    GBBI01004032    JAC14680.1    GGMR01020322    MBY32941.1    OXA60848.1    ABLF02023722    ABLF02057546    GGMR01010750    MBY23369.1    GBBI01004140    JAC14572.1    ABLF02023842    ABLF02028949    ABLF02058391   

Proteomes

UP000283053    UP000053240    UP000218220    UP000078542    UP000036403    UP000053268    + More
UP000279307    UP000007266    UP000078492    UP000069940    UP000249989    UP000053825    UP000198287    UP000000311    UP000007819    UP000053097   

Pfam

PF00665   rve        + More
PF18701   DUF5641
PF17921   Integrase_H2C2
PF05585   DUF1758
PF03564   DUF1759
PF05380   Peptidase_A17
PF00078   RVT_1

Interpro

IPR036397   RNaseH_sf        + More
IPR040676   DUF5641       
IPR012337   RNaseH-like_sf       
IPR001584   Integrase_cat-core       
IPR008042   Retrotrans_Pao       
IPR008737   Peptidase_asp_put       
IPR005312   DUF1759       
IPR041588   Integrase_H2C2       
IPR001878   Znf_CCHC       
IPR021109   Peptidase_aspartic_dom_sf       
IPR000477   RT_dom       
IPR001995   Peptidase_A2_cat       
IPR036875   Znf_CCHC_sf       
IPR001606   ARID_dom       

SUPFAM

SSF53098   SSF53098        + More
SSF57756   SSF57756       

Gene 3D

3.30.420.10     2.40.70.10    

ProteinModelPortal

A0A3S2P7Y4   A0A0N0PBK0   S4PWG7   A0A2A4JM97   A0A2A4JBY8   A0A1Y1KBX1   + More
A0A1Y1MWL6   A0A194RAG7   A0A194RGQ8   A0A1Y1MY22   A0A151K1X2   A0A0J7KLR0   A0A194QJ48   A0A0A9VWY7   A0A0A9WEH4   A0A3S2NVW9   A0A1Y1LN53   A0A0N1I390   A0A151IPF9   A0A0V0GCF2   A0A2L2YR37   A0A1Y1L2Y2   A0A0J7NFF3   A0A0N1IBH6   A0A2S2P0T8   A0A3L8DC69   A0A0J7KE03   D6X1G6   A0A2L2YW58   A0A151JRY2   A0A151I9J7   A0A182GKL8   A0A151JQ29   E9J9Y8   A0A139W8E1   A0A182GDY6   V5FWW0   A0A1Y1L369   A0A0J7K7S0   A0A224XNG8   A0A182GUJ7   A0A0L7QJG1   A0A151J2Q1   A0A1B6EB86   A0A2S2P7L7   A0A194RI04   A0A2W1BII4   A0A2L2YLT6   A0A182G8P0   A0A0J7KDW6   A0A2S2PNZ4   A0A1Y1N6J9   A0A0J7KFV3   A0A151K236   A0A2S2PI44   A0A2L2YNC9   A0A2S2PUJ2   A0A151J2Q3   A0A151JA43   A0A151IGU0   A0A182G7L0   A0A0J7KBV8   A0A0L7QYD7   A0A151ICQ0   A0A0L7RFP1   A0A2A4IUY1   A0A0J7JZS0   A0A0J7JZ44   A0A0J7KD18   A0A1B6CM38   A0A0J7KD57   A0A0A9Z2M8   A0A226CW75   A0A2A4IUL3   E2ARC4   J9K774   A0A1Y1MD76   J9LHB7   D7GYB7   A0A1Y1M979   A0A151IZU4   A0A069DYA1   A0A151IJA6   A0A226CWA5   A0A226DMG9   A0A226EPI5   A0A151IAB8   A0A3L8D4B7   A0A226E226   X1XU48   X1XMQ5   A0A0A9YD88   A0A026WMA2   A0A023EZK8   A0A2S2PTX9   A0A226EUF5   X1XH24   A0A2S2P1P0   A0A023EZB2   J9JT64  

KEGG

105841486    no KO assigned | (RefSeq) uncharacterized LOC105841486

GO

GO:0003676   GO:0015074   GO:0008270   GO:0004190   GO:0016301   GO:0016021   GO:0003677   GO:0003964   GO:0016020   GO:0005886   GO:0007155   GO:0000049   GO:0004812   GO:0043039   GO:0042555   GO:0048384  

Length:

331

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

4.44680999999999

Exp number, first 60 AAs:

2.58506

Total prob of N-in:

0.17517

outside

1  -  331

 

 

Pi

1.581899

Theta

6.534468

Tajima's D

-2.123039

CLR

65.660279

CSRT

0.00674966251687416

Interpretation

Uncertain