Gene

KWMTBOMO03700

Pre Gene Modal

BGIBMGA002733

Annotation

neuropeptide_FF_receptor_2-like_[Bombyx_mori]

Location

Bomo_Chr6(+):15831614-15833284      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 3.152

CDS

ATGGCTCCGTTAAGGCTCCCGGTAGACTATTACACAGATGATTTCTTAAATTTCTCGACACAGAATCCCAATAACGAGCGCCACCACACTCGTCACAACCACTCTCATTTGCGAGAGAGTCACAAGAACCATGTCGCAGATATGCTGTCGAATTCCATTATAGACGCATTCAATACGCGCTTTGTGGAGAACAGTGTGCTGCCTGATATGGAGCCGCTGTCCTCTCACATGGACTTGGAGGAGAGGCACTATCCATCGCGGATGAACGGGACATTAAATAGATCTGATTTCGGTGGCGATGAGTTCATGTACCGTCACAGTGGGGCGATGACCGCGGTGTATTGCGCGGCGTATCTGCTGGTGTTTCTCGTGGGGCTGGTCGGGAACTGCTTCGTGATTGCTGTGGTGTATCGGTCGCCGCGTATGAGAACTGTCACCAATTTTTTCATCGTGAACTTGGCGTTTGCTGATATCCTGGTCATCGTGTTCTGTCTGCCCGCGACGCTCATGTCAAACATATTTGTCCGTTAA

Protein

MAPLRLPVDYYTDDFLNFSTQNPNNERHHTRHNHSHLRESHKNHVADMLSNSIIDAFNTRFVENSVLPDMEPLSSHMDLEERHYPSRMNGTLNRSDFGGDEFMYRHSGAMTAVYCAAYLLVFLVGLVGNCFVIAVVYRSPRMRTVTNFFIVNLAFADILVIVFCLPATLMSNIFVR

Miscellaneous

The sequence shown here is derived from an EMBL/GenBank/DDBJ third party annotation (TPA) entry.

Similarity

Belongs to the G-protein coupled receptor 1 family.

Uniprot

H9IZP8   J7RNN2   A0A0S1YDQ5   A0A194PXW9   A0A194R9C8   A0A212FJT2   + More
A0A2H1WW09   A0A2A4K3C2   A0A0L7LSL9   A0A088A707   A0A1W4X1F3   A9X454   A0A0L7QLJ1   E0VGM1   B7PIU3   A0A0K8RAQ7   A0A3Q0IMY7   A0A1S3DQQ2   A0A195E7X4   E2AMF9   A0A151IQD8   A0A3L8DP57   A0A026VW91  

Pubmed

19121390    16378592    26354079    22118469    26227816    20566863    + More
20798317    30249741    24508170   

EMBL

BABH01038016    BK005732    DAA35192.1    KT031041    RSAL01000004    ALM88339.1    + More
RVE54563.1    KQ459589    KPI97599.1    KQ460500    KPJ14237.1    AGBW02008243    OWR53969.1    ODYU01011092    SOQ56614.1    NWSH01000231    PCG78170.1    JTDY01000173    KOB78452.1    DQ339143    ABC68306.1    KQ414915    KOC59498.1    DS235150    EEB12527.1    ABJB011126732    DS721695    EEC06515.1    GADI01005662    JAA68146.1    MG550193    AWT50627.1    KQ979568    KYN20919.1    GL440813    EFN65383.1    KQ976780    KYN08365.1    QOIP01000006    RLU22214.1    KK107681    EZA48058.1   

Proteomes

UP000005204    UP000283053    UP000053268    UP000053240    UP000007151    UP000218220    + More
UP000037510    UP000005203    UP000192223    UP000053825    UP000009046    UP000001555    UP000079169    UP000078492    UP000000311    UP000078542    UP000279307    UP000053097   

PRIDE

H9IZP8    J7RNN2   

Pfam

PF00001   7tm_1

Interpro

IPR000276   GPCR_Rhodpsn        + More
IPR017452   GPCR_Rhodpsn_7TM       
IPR000611   NPY_rcpt       

ProteinModelPortal

H9IZP8   J7RNN2   A0A0S1YDQ5   A0A194PXW9   A0A194R9C8   A0A212FJT2   + More
A0A2H1WW09   A0A2A4K3C2   A0A0L7LSL9   A0A088A707   A0A1W4X1F3   A9X454   A0A0L7QLJ1   E0VGM1   B7PIU3   A0A0K8RAQ7   A0A3Q0IMY7   A0A1S3DQQ2   A0A195E7X4   E2AMF9   A0A151IQD8   A0A3L8DP57   A0A026VW91  

PDB

5WS3     E-value=3.38185e-17,     Score=211

KEGG

101743732    K08375 neuropeptide FF receptor 2 | (RefSeq) BomSIFR; neuropeptide FF receptor 2-like

GO

GO:0004930   GO:0016021   GO:0004983   GO:0050254   GO:0032870   GO:0007186   GO:0005887   GO:0005737   GO:0006432   GO:0000049   GO:0004812   GO:0043039   GO:0042555   GO:0048384  

Length:

176

Number of predicted TMHs:

2

Exp number of AAs in TMHs:

46.23213

Exp number, first 60 AAs:

0.00043

Total prob of N-in:

0.06465

outside

1  -  112

TMhelix

113  -  135

inside

136  -  147

TMhelix

148  -  170

outside

171  -  176

 

 

Pi

13.12454

Theta

13.512823

Tajima's D

-0.67309

CLR

0

CSRT

0.211739413029349

Interpretation

Uncertain