SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03697
Pre Gene Modal
BGIBMGA007611
Annotation
PREDICTED:_uncharacterized_protein_LOC105389986_[Plutella_xylostella]
Location in the cell
Cytoplasmic   Reliability : 1.29 Extracellular   Reliability : 1.637
 

Sequence

CDS
ATGTTTCGCTTTTTGATACCCTTAATTCTGAGCATAGCAGCAGCGAACTCGATTCAAGAAAGAGCGTCGCCGTACAGACTCAAATACGCCGTGGCGTCGGAGTCCCAACTCAAATTCGCCCTAGAAAACAAATACGATGACACCGGCCCGGGGGCGAAACGACCGGAATACGCTTACAGCACCTACAAGAATTTACAAGATGCCATCATAGCTTATTTGGACGACCCAGACACCAAGCTGCCGGAGAGCGAAAAAGCTATAGCCATCCAGAAACTATTCAAGAACCCAAATTACTATCCGAGACAGCAAATCCAAAGACACTATCCGAAAACCGTTGAAGAATACACCGGCTATAATGCAGAAACTGAAAGACCCGTTTACAAATACACGATACCCGAAAAGAAGCCTACTTATTACGGGGAAGAAGAGAATATCAATTTAGGAAACTTTGAAGGGAACGGCCTCAGTTTGTTCAAGACTGAGAAAAGACCTGAGCCGCTAAATTTGCGTAAACACCAGGCGATCAAAGGCGCTCCATTAAGTGTAGCGCATTACACGAGAGAACAAGAGTATGAAGAGCCCCACGATCAGTTCAATCCTCATCCGAAGTACACTTTCTCCTACGGAGTACACGACAAGAAGACGGGCGACACAAAATCAGCCCACGAAACCAGAGAAGGAGGTACCGTCCACGGATATTATAGTTTCTTAGACGCCGACGGAAAACAGAGGATCGTGCACTACACGGCTGATGATAAACTAGGCTTCAGAGCGACTGTACAAAGAACTAACACACAACTTTAA
Protein
MFRFLIPLILSIAAANSIQERASPYRLKYAVASESQLKFALENKYDDTGPGAKRPEYAYSTYKNLQDAIIAYLDDPDTKLPESEKAIAIQKLFKNPNYYPRQQIQRHYPKTVEEYTGYNAETERPVYKYTIPEKKPTYYGEEENINLGNFEGNGLSLFKTEKRPEPLNLRKHQAIKGAPLSVAHYTREQEYEEPHDQFNPHPKYTFSYGVHDKKTGDTKSAHETREGGTVHGYYSFLDADGKQRIVHYTADDKLGFRATVQRTNTQL

Summary

Pfam
PF00379   Chitin_bind_4
Interpro
IPR000618   Insect_cuticle        + More
IPR031311   CHIT_BIND_RR_consensus       

Ontologies

Topology

SignalP
Position:   1 - 15,         Likelihood:  0.974308
 
 
Length:
267
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01257
Exp number, first 60 AAs:
0.01257
Total prob of N-in:
0.00313
outside
1  -  267
 
 

Population Genetic Test Statistics

Pi
2.239411
Theta
20.014221
Tajima's D
-2.234542
CLR
1.114241
CSRT
0.00414979251037448
Interpretation
Uncertain
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