Gene

KWMTBOMO03694  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA014478

Annotation

PREDICTED:_saccharopine_dehydrogenase-like_oxidoreductase_[Bombyx_mori]

Location

Bomo_Chr6(+):15655584-15663451      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.856

CDS

ATGCAGCTAAATTACAACGAACAAGCCGAAGACGCCGGCGTGTACGTCATCAGCGCCTGCGGATTTGACAGCATACCTTGTGACTTGGGCGTTATACACTTAATGAAAAACTTTGAGGGCGTGCTGAATTCTGTAGAGTCGTATATCATGATGAGGGTAGCGCCGGAGCACGCGGCGGAGGCGGCCCGCAGCGGCGTCCTGCACTACGGCACCTGGGAGTCCCTGGTGCACAGTCTGGCGAACAGTCACAAATTGAAGCCGCTGAGGGAACAGCTGTATCCCTCGCGGCTGCCCTCCTGCAAGCCCAAGCTCTGCCGACGATGGTACCACAGGAGGGGCGGCGCGTCGTGCCTGCCGTTCCTGGGCGCGGACGAGTCGGTGGTGCACCGCACGCAGCGCCACCTGCACGCGGCCGGCGCCCGCCCCGCGCAGCTCCGCGCCTACCTCGCGCTGCCCTCCGCACTGCACGCCGCGCTCCTCACGCTGGGCGCCCTCCTGCTGTACGTGCTGGCCCAGTGGAGCGTCACCAGGCGGCTGCTGCTCGACCACCCGCGGCTGTTCTCCGGCGGCATGGCGACCCGGCGCGGGCCCGCAGAGAACGTGATGCTCAACACCAAGTTCGAGGTGGAGCTGGTGGGGTCGGGCTGGGCCGCCGCGACCGACGCCGACGTCACCGAGCCGGACAAGAAGCTGGTTGTGAAGGTGTCGGGCTCCAACCCCGGGTACGGCGCCACGGTGACGGCGCTGCTGGTCTCCGCCCTCACTATACTGAACGAACAACACAAAATGCCTAAAAGCGGCGGGGTCCTGACAACCGGCGCCGCGTTCAAAGACACGAGCATCATTGATGTCCTCCACGAAAACGGCCTCAAGTTTGATATCAGTACGTAA

Protein

MQLNYNEQAEDAGVYVISACGFDSIPCDLGVIHLMKNFEGVLNSVESYIMMRVAPEHAAEAARSGVLHYGTWESLVHSLANSHKLKPLREQLYPSRLPSCKPKLCRRWYHRRGGASCLPFLGADESVVHRTQRHLHAAGARPAQLRAYLALPSALHAALLTLGALLLYVLAQWSVTRRLLLDHPRLFSGGMATRRGPAENVMLNTKFEVELVGSGWAAATDADVTEPDKKLVVKVSGSNPGYGATVTALLVSALTILNEQHKMPKSGGVLTTGAAFKDTSIIDVLHENGLKFDIST

Uniprot

H9JY60   A0A1E1WC13   A0A1E1VXL0   A0A2A4JQ28   A0A2H1WUH9   A0A212F873   + More
A0A437BVQ6   S4PSD2   A0A194QFX5   A0A2A4JJC6   A0A437BM77   A0A1B6MG41   A0A182NRA6   A0A182VZZ4   U5EMX7   A0A182P3U7   Q17GW8   Q1HQU4   Q17GX0   A0A023ET52   A0A182Q1H0   A0A3B0JZV3   A0A182Y6P8   A0A023ERZ9   B0WA71   Q7QCJ0   A0A182TED9   A0A182XAJ3   A0A182HSD4   Q17GW9   A0A182RQK4   A0A182GXX7   A0A1S4F332   B4G2Z2   A0A2J7REF3   A0A2J7RED6   W8BYH8   B4K871   A0A182VKQ2   A0A182LEC5   B4NIZ0   A0A182GXX8   A0A1Q3FAZ6   A0A0L0CGL4   B3LVD9   A0A0K8U019   A0A084VTP8   A0A1B6H2S7   A0A023ERV2   Q297S7   B4JTQ0   A0A1B0AV82   B3P299   A0A034WNK5   A0A0M3QXV3   A0A0R3NKK4   A0A1Y9HDV2   A0A336M6G8   B4I3W8   A0A1W4UN15   A0A182M249   A0A182M578   A0A1A9VLX1   A0A182GXX9   A0A1B6HJK4   B4PV64   A0A182LCW1   Q7Q0G7   A0A182U5H1   A0A1A9ZQ48   A0A1B0CA41   A0A1W4UJW0   A0A182UWJ3   A0A1Q3FGN7   A0A1L8ECP5   A0A1L8ECR3   A0A084W724   A0A1L8ECP0   A0A182XKF8   A0A1A9W2U6   Q9VN86   A0A232EP89   K7ISA2   A0A1A9YFT7   B4QW83   A0A026W6W5   A0A2C9GQG8   B4NKS5   B4PNT0   A0A1J1J316   A0A3B0JDT7   B4LY94   B0WA72   W5JVK1   A0A1B0FM38   B4HGY8   A0A3F2Z105   A0A1W4WKW1   B3P1B4   Q9VG81  

Pubmed

19121390    22118469    23622113    26354079    17510324    17204158    + More
24945155    25244985    12364791    14747013    17210077    26483478    17994087    24495485    18057021    20966253    26108605    24438588    15632085    25348373    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    28648823    20075255    24508170    30249741    20920257    23761445   

EMBL

BABH01042326    GDQN01006555    JAT84499.1    GDQN01011625    JAT79429.1    NWSH01000840    + More
PCG73919.1    ODYU01011153    SOQ56718.1    AGBW02009779    OWR49937.1    RSAL01000004    RVE54557.1    GAIX01013963    JAA78597.1    KQ459011    KPJ04387.1    NWSH01001373    PCG71492.1    RSAL01000033    RVE51461.1    GEBQ01005101    JAT34876.1    GANO01000821    JAB59050.1    CH477255    EAT45887.1    DQ440350    ABF18383.1    EAT45884.1    EAT45885.1    GAPW01001607    JAC11991.1    AXCN02001467    OUUW01000005    SPP81040.1    GAPW01001608    JAC11990.1    DS231869    EDS40900.1    AAAB01008859    EAA08164.4    EGK96812.1    APCN01000262    APCN01000263    EAT45886.1    JXUM01096451    KQ564265    KXJ72502.1    CH479179    EDW24187.1    NEVH01005277    PNF39200.1    PNF39201.1    GAMC01008199    JAB98356.1    CH933806    EDW15425.1    KRG01546.1    KRG01547.1    CH964272    EDW84892.1    JXUM01096456    KXJ72503.1    GFDL01010299    JAV24746.1    JRES01000409    KNC31558.1    CH902617    EDV41467.1    GDHF01032451    GDHF01014080    JAI19863.1    JAI38234.1    ATLV01016383    KE525080    KFB41342.1    GECZ01000812    JAS68957.1    GAPW01001651    JAC11947.1    CM000070    EAL28128.1    CH916374    EDV91479.1    JXJN01004067    CH954181    EDV47849.1    GAKP01003207    JAC55745.1    CP012526    ALC46573.1    KRS99812.1    UFQS01000622    UFQT01000622    SSX05497.1    SSX25856.1    CH480821    EDW54911.1    AXCM01004705    AXCM01000655    KXJ72504.1    GECU01032858    JAS74848.1    CM000160    EDW95733.1    AAAB01008982    EAA14649.4    AJWK01003261    GFDL01008325    JAV26720.1    GFDG01002289    JAV16510.1    GFDG01002288    JAV16511.1    ATLV01021094    KE525312    KFB46018.1    GFDG01002291    JAV16508.1    AE014297    AY075205    AAF52062.1    AAL68073.1    NNAY01002972    OXU20199.1    CM000364    EDX11682.1    KK107372    QOIP01000004    EZA51718.1    RLU23201.1    RLU23405.1    APCN01002169    EDW84136.1    EDW97095.1    CVRI01000066    CRL05862.1    SPP80487.1    CH940650    EDW67982.1    KRF83597.1    EDS40901.1    ADMH02000300    ETN67050.1    CCAG010005444    CH480815    EDW42459.1    EDV49373.1    BT024191    AAF54804.1    ABC86253.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000283053    UP000053268    UP000075884    + More
UP000075920    UP000075885    UP000008820    UP000075886    UP000268350    UP000076408    UP000002320    UP000007062    UP000075902    UP000076407    UP000075840    UP000075900    UP000069940    UP000249989    UP000008744    UP000235965    UP000009192    UP000075903    UP000075882    UP000007798    UP000037069    UP000007801    UP000030765    UP000001819    UP000001070    UP000092460    UP000008711    UP000092553    UP000001292    UP000192221    UP000075883    UP000078200    UP000002282    UP000092445    UP000092461    UP000091820    UP000000803    UP000215335    UP000002358    UP000092443    UP000000304    UP000053097    UP000279307    UP000183832    UP000008792    UP000000673    UP000092444    UP000192223   

PRIDE

H9JY60    Q9VN86    Q9VG81   

Pfam

PF03435   Sacchrp_dh_NADP        + More
PF17917   RT_RNaseH

Interpro

IPR036291   NAD(P)-bd_dom_sf        + More
IPR005097   Sacchrp_dh_NADP       
IPR041373   RT_RNaseH       
IPR036047   F-box-like_dom_sf       

SUPFAM

SSF51735   SSF51735        + More
SSF81383   SSF81383       

ProteinModelPortal

H9JY60   A0A1E1WC13   A0A1E1VXL0   A0A2A4JQ28   A0A2H1WUH9   A0A212F873   + More
A0A437BVQ6   S4PSD2   A0A194QFX5   A0A2A4JJC6   A0A437BM77   A0A1B6MG41   A0A182NRA6   A0A182VZZ4   U5EMX7   A0A182P3U7   Q17GW8   Q1HQU4   Q17GX0   A0A023ET52   A0A182Q1H0   A0A3B0JZV3   A0A182Y6P8   A0A023ERZ9   B0WA71   Q7QCJ0   A0A182TED9   A0A182XAJ3   A0A182HSD4   Q17GW9   A0A182RQK4   A0A182GXX7   A0A1S4F332   B4G2Z2   A0A2J7REF3   A0A2J7RED6   W8BYH8   B4K871   A0A182VKQ2   A0A182LEC5   B4NIZ0   A0A182GXX8   A0A1Q3FAZ6   A0A0L0CGL4   B3LVD9   A0A0K8U019   A0A084VTP8   A0A1B6H2S7   A0A023ERV2   Q297S7   B4JTQ0   A0A1B0AV82   B3P299   A0A034WNK5   A0A0M3QXV3   A0A0R3NKK4   A0A1Y9HDV2   A0A336M6G8   B4I3W8   A0A1W4UN15   A0A182M249   A0A182M578   A0A1A9VLX1   A0A182GXX9   A0A1B6HJK4   B4PV64   A0A182LCW1   Q7Q0G7   A0A182U5H1   A0A1A9ZQ48   A0A1B0CA41   A0A1W4UJW0   A0A182UWJ3   A0A1Q3FGN7   A0A1L8ECP5   A0A1L8ECR3   A0A084W724   A0A1L8ECP0   A0A182XKF8   A0A1A9W2U6   Q9VN86   A0A232EP89   K7ISA2   A0A1A9YFT7   B4QW83   A0A026W6W5   A0A2C9GQG8   B4NKS5   B4PNT0   A0A1J1J316   A0A3B0JDT7   B4LY94   B0WA72   W5JVK1   A0A1B0FM38   B4HGY8   A0A3F2Z105   A0A1W4WKW1   B3P1B4   Q9VG81  

KEGG

101736300    no KO assigned | (RefSeq) saccharopine dehydrogenase-like oxidoreductase

GO

GO:0016021   GO:0016491   GO:0005811   GO:0009247   GO:0005739   GO:0005886  

Length:

296

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

35.5323

Exp number, first 60 AAs:

5.43773

Total prob of N-in:

0.64948

inside

1  -  148

TMhelix

149  -  171

outside

172  -  296

 

 

Pi

25.150203

Theta

24.108979

Tajima's D

0.189787

CLR

0.76121

CSRT

0.428628568571571

Interpretation

Uncertain