Gene

KWMTBOMO03689

Pre Gene Modal

BGIBMGA014491

Annotation

PREDICTED:_glutamate_dehydrogenase?_mitochondrial-like_[Bombyx_mori]

Location

Bomo_Chr6(-):15608007-15614143      View in EpiBrowser

Full name

Glutamate dehydrogenase      

Location in the cell

Cytoplasmic   Reliability : 1.869 Mitochondrial   Reliability : 2.256

CDS

ATGACCATCAGTAACTTTATTCACAACGAGCATTGGATGAAACAGATCGGCTTGAAGCCCGGCTTCGAGGGCAAAACAGCTATTATTCAAGGTTACGGCAACGTGGGCAGTTTTGCTGCCATTTACCTTCAGCAGCACGGAGTCAAAGTCATCGGGGTTTTAGAAGCTGATTGCAACCTCCACAAACCTGAAGGGTTAAACACTGTGGAGTTACTGCAGTACAAACAGAAGAACAAGGGAAGCGCTAAAGGCTACCCGAACGCCAAAGACGTGGGCCCGGATTTGTTATACGAAAACTGCGACATCCTCGTCGTCGCGGCGATGGAGAAGACTCTCTCACAACAGGTCGCAGCCAAACTGAACTGTAAGATTATCGGCGAAGGCGCGAACGGTCCAACGACTCCGGCCGCGGACGTGATACTCCGCGACAAGAAAGTCCTGGTCATCCCGGACTTGCTAGCGAACGCGGGCGGAGTCACCGTCTCGTACTTCGAATTCTTGAAGAATATCAACCATGTCAGCTTCGGGAAATTGAGTATCAAGTTCTGGCGAGACTCTAATACTGCATTACTAGATTCCGTTGAAAAGTCGTTAAAAGCGGCCAATATCGACGCGAAAATGGGACCCACGCCGCTGTTCAAGTCGCTGATGTCCGGCGCCAACGAGGAGCACATTGTCAACTCTGGGCTCGAGTACTCTATGACCAACGCTTGTAAAGTACGTCAACTGTCATTCGTTGGGTGA

Protein

MTISNFIHNEHWMKQIGLKPGFEGKTAIIQGYGNVGSFAAIYLQQHGVKVIGVLEADCNLHKPEGLNTVELLQYKQKNKGSAKGYPNAKDVGPDLLYENCDILVVAAMEKTLSQQVAAKLNCKIIGEGANGPTTPAADVILRDKKVLVIPDLLANAGGVTVSYFEFLKNINHVSFGKLSIKFWRDSNTALLDSVEKSLKAANIDAKMGPTPLFKSLMSGANEEHIVNSGLEYSMTNACKVRQLSFVG

Similarity

Belongs to the Glu/Leu/Phe/Val dehydrogenases family.

Uniprot

A0A194RE92   A0A194QHH4   A0A2A4JI69   A0A212FKL6   A0A3S2M4V8   A0A2H1WUM6   + More
A0A0L7LFF5   A0A183UMT8   A0A0B2UXI4   F1L1P6   A0A0M3ISM5   E0VD85   A0A0J9Y6S1   A0A044T0R5   A0A0R3QQH1   T2MH20   A0A1S0UE31   A0A3P7DLL1   A0A0K0JSW1   A0A0N4TSG0   A0A183I9C8   A0A183VB84   A0A1I7W421   A0A0R3RUG8   Q0IG14   A0A1S4F5X6   D6WCS6   A0A3P6TKV7   A0A0N5CM30   A0A183E9N4   A0A2C9K6L1   A0A182TI31   A0A182VPR7   A0A182REA3   A0A182TAN9   A0A182M4A2   A0A182H069   A0A3S3SHV3   A0A182JD22   A0A182PSR1   A0A0N5AJQ7   A0A182IDH1   A0A182YES6   A0A1W4W2V6   A0A0B2VUX1   A0A182NDZ6   T1EAG6   A0A182XDR2   F1L1D2   A0A182QPR0   A0A182JVX8   A0A1B6F9V0   Q7PPE1   A0A1B6ERL0   A0A183B287   A0A0R3TNF8   A0A0Q9X1Y5   A0A1I8EYJ3   A0A0M3QYL6   A0A0X3PYS3   A0A183T5E0   A0A146NJ20   A0A1Q3FSX3   A0A0N5A8V8   A0A0N4UZV9   A0A0N4UEX9   A0A3G5ANZ7   T1JVD9   A0A1D2MF77   A0A1Q3FT11   B4K740   A0A0Q9WR91   A0A2M3ZZI4   A0A3M7PMT4   A0A2G9UD45   A0A183VC48   A0A267FVZ7   A0A0N4VLS1   A0A267EFG5   A0A0P5P4Y5   A0A147B756   A0A1I8CCC2   R7V8Z9   C1LJB0   A0A2R7W1V0   A0A1Q3FJJ7   A0A1Q3FJB7   A0A2M4CT81   B0X5C8   F5HLL7   A0A1I8ASW0   A0A0P5M5H4   A0A0N8CPB4   A0A2M3YYJ1   B4M0C5   A0A2M3YYN3   A0A0C4DHE7   A0A182SSZ4   A0A0P5WBZ1  

Pubmed

26354079    22118469    26227816    21685128    20566863    17885136    + More
24065732    25217238    17510324    18362917    19820115    15562597    26483478    25244985    12364791    14747013    17210077    17994087    26850696    27289101    30375419    26829753    23254933    26392177    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867   

EMBL

KQ460500    KPJ14246.1    KQ459011    KPJ04385.1    NWSH01001373    PCG71489.1    + More
AGBW02008029    OWR54281.1    RSAL01000033    RVE51459.1    ODYU01011146    SOQ56707.1    JTDY01001348    KOB74114.1    UYWY01020291    VDM41129.1    JPKZ01003059    KHN73782.1    JI169691    ADY44050.1    DS235072    EEB11341.1    LN855219    CDQ03230.1    CMVM020000121    UZAG01016196    VDO26617.1    HAAD01005326    CDG71558.1    JH712563    EJD73849.1    UYWW01001621    VDM10770.1    CDQ03229.1    UZAD01013238    VDN92777.1    UZAM01000410    VDO80971.1    UYWY01025025    VDM49325.1    CH477281    EAT44909.1    KQ971311    EEZ99054.2    UYRX01000559    VDK83843.1    UYYF01000134    VDM96497.1    UYRT01085526    VDN30244.1    AXCM01000238    JXUM01021986    KQ560617    KXJ81598.1    NCKU01000444    NCKU01000443    NCKU01000442    RWS15477.1    RWS15490.1    RWS15508.1    APCN01005979    JPKZ01000852    KHN85152.1    GAMD01001053    JAB00538.1    JI169507    ADY43936.1    AXCN02002212    GECZ01022779    JAS46990.1    AAAB01008952    EAA10575.6    GECZ01029180    JAS40589.1    UZAN01054813    VDP90594.1    UZAE01012427    VDO05106.1    CH933806    KRG02059.1    CP012526    ALC47893.1    GEEE01009453    JAP53772.1    UYSU01036726    VDL98073.1    GCES01154448    JAQ31874.1    GFDL01004380    JAV30665.1    UXUI01007466    VDD87744.1    UYYG01000010    VDN50925.1    MH990517    AYV89064.1    CAEY01000792    LJIJ01001474    ODM91626.1    GFDL01004306    JAV30739.1    EDW16353.1    CH940650    KRF83230.1    GGFK01000665    MBW33986.1    REGN01009982    RMZ99957.1    KZ347234    PIO68157.1    UYWY01025382    VDM49639.1    NIVC01000714    PAA77951.1    UXUI01011593    VDD96366.1    NIVC01002256    PAA59502.1    GDIQ01143569    JAL08157.1    GEIB01001777    JAR86594.1    AMQN01004639    KB294061    ELU15049.1    FN319060    CAX74788.1    KK854250    PTY13716.1    GFDL01007350    JAV27695.1    GFDL01007368    JAV27677.1    GGFL01004352    MBW68530.1    DS232374    EDS40813.1    AAAB01008898    EGK97150.1    GDIQ01160360    JAK91365.1    GDIP01112135    JAL91579.1    GGFM01000592    MBW21343.1    EDW67287.1    GGFM01000621    MBW21372.1    AE014297    AAN13963.3    GDIP01088245    JAM15470.1   

Proteomes

UP000053240    UP000053268    UP000218220    UP000007151    UP000283053    UP000037510    + More
UP000050794    UP000267007    UP000031036    UP000036681    UP000009046    UP000006672    UP000024404    UP000050602    UP000270924    UP000038020    UP000278627    UP000050793    UP000095285    UP000050640    UP000008820    UP000007266    UP000277928    UP000046394    UP000276776    UP000050760    UP000076420    UP000075902    UP000075920    UP000075900    UP000075901    UP000075883    UP000069940    UP000249989    UP000285301    UP000075880    UP000075885    UP000046393    UP000075840    UP000076408    UP000192223    UP000075884    UP000076407    UP000075886    UP000075881    UP000007062    UP000050740    UP000046398    UP000278807    UP000009192    UP000093561    UP000092553    UP000050788    UP000275846    UP000038041    UP000274131    UP000038040    UP000274756    UP000015104    UP000094527    UP000008792    UP000276133    UP000215902    UP000095286    UP000014760    UP000002320    UP000095287    UP000000803   

Pfam

PF00208   ELFV_dehydrog        + More
PF02812   ELFV_dehydrog_N

Interpro

IPR014362   Glu_DH        + More
IPR033922   NAD_bind_Glu_DH       
IPR006097   Glu/Leu/Phe/Val_DH_dimer_dom       
IPR006095   Glu/Leu/Phe/Val_DH       
IPR006096   Glu/Leu/Phe/Val_DH_C       
IPR033524   Glu/Leu/Phe/Val_DH_AS       
IPR036291   NAD(P)-bd_dom_sf       

SUPFAM

SSF51735   SSF51735       

CDD

cd01076  NAD_bind_1_Glu_DH

ProteinModelPortal

A0A194RE92   A0A194QHH4   A0A2A4JI69   A0A212FKL6   A0A3S2M4V8   A0A2H1WUM6   + More
A0A0L7LFF5   A0A183UMT8   A0A0B2UXI4   F1L1P6   A0A0M3ISM5   E0VD85   A0A0J9Y6S1   A0A044T0R5   A0A0R3QQH1   T2MH20   A0A1S0UE31   A0A3P7DLL1   A0A0K0JSW1   A0A0N4TSG0   A0A183I9C8   A0A183VB84   A0A1I7W421   A0A0R3RUG8   Q0IG14   A0A1S4F5X6   D6WCS6   A0A3P6TKV7   A0A0N5CM30   A0A183E9N4   A0A2C9K6L1   A0A182TI31   A0A182VPR7   A0A182REA3   A0A182TAN9   A0A182M4A2   A0A182H069   A0A3S3SHV3   A0A182JD22   A0A182PSR1   A0A0N5AJQ7   A0A182IDH1   A0A182YES6   A0A1W4W2V6   A0A0B2VUX1   A0A182NDZ6   T1EAG6   A0A182XDR2   F1L1D2   A0A182QPR0   A0A182JVX8   A0A1B6F9V0   Q7PPE1   A0A1B6ERL0   A0A183B287   A0A0R3TNF8   A0A0Q9X1Y5   A0A1I8EYJ3   A0A0M3QYL6   A0A0X3PYS3   A0A183T5E0   A0A146NJ20   A0A1Q3FSX3   A0A0N5A8V8   A0A0N4UZV9   A0A0N4UEX9   A0A3G5ANZ7   T1JVD9   A0A1D2MF77   A0A1Q3FT11   B4K740   A0A0Q9WR91   A0A2M3ZZI4   A0A3M7PMT4   A0A2G9UD45   A0A183VC48   A0A267FVZ7   A0A0N4VLS1   A0A267EFG5   A0A0P5P4Y5   A0A147B756   A0A1I8CCC2   R7V8Z9   C1LJB0   A0A2R7W1V0   A0A1Q3FJJ7   A0A1Q3FJB7   A0A2M4CT81   B0X5C8   F5HLL7   A0A1I8ASW0   A0A0P5M5H4   A0A0N8CPB4   A0A2M3YYJ1   B4M0C5   A0A2M3YYN3   A0A0C4DHE7   A0A182SSZ4   A0A0P5WBZ1  

PDB

1L1F     E-value=6.71711e-56,     Score=547

KEGG

101737231    K00261 glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] | (RefSeq) glutamate dehydrogenase, mitochondr

PATHWAY

00220    Arginine biosynthesis - Bombyx mori (domestic silkworm)
00250    Alanine, aspartate and glutamate metabolism - Bombyx mori (domestic silkworm)
00471    D-Glutamine and D-glutamate metabolism - Bombyx mori (domestic silkworm)
00910    Nitrogen metabolism - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)
01200    Carbon metabolism - Bombyx mori (domestic silkworm)

GO

GO:0006520   GO:0016639   GO:0000166   GO:0016491   GO:0016021   GO:0042802   GO:0006116   GO:0004352   GO:0005739   GO:0006536   GO:0004353   GO:0009226   GO:0005515   GO:0051103   GO:0005524   GO:0008270   GO:0042555   GO:0048384   GO:0055114  

Length:

247

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.43027

Exp number, first 60 AAs:

0.31051

Total prob of N-in:

0.06566

outside

1  -  247

 

 

Pi

4.460472

Theta

15.587816

Tajima's D

-1.397914

CLR

0.179132

CSRT

0.0709464526773661

Interpretation

Uncertain