Gene

KWMTBOMO03688  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA014492

Annotation

putative_nad_dependent_epimerase/dehydratase_[Danaus_plexippus]

Location

Bomo_Chr6(+):15599214-15606062      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.694 Nuclear   Reliability : 1.116

CDS

ATGAAATTAAATGGATTTAAACGAGGTTCTCAAGAGGGCAAGAAGCAACGTCGATTTATAACTATAAAGATGAGTGACGGAAATGTTGTTCTTGTGACCGGAGGCTCCGGACTAGTTGGTCAAGCAATAAAGACAGTTATAGAGCGCGACAGACAGAAACGAAATAGTGATTATGATAGTGAGACGTGGATATTTAGCGGTTCCAAGGATGGCGACCTCCGAGATAAAACTCAAACAGAAGCTCTATTTGCTAAACACAAGCCTACCCATGTAATACATTTAGCGGCAATGGTTGGGGGACTGTTTCACAATATGGCACACAATTTGGATTTCTTTAGAGAGAATATGTCAATAAATGATAATATTCTACAAGCGTGTCACAAATATAATGTAAAGAAGGTTGTATCTTGTCTCTCGACATGCATATTTCCTGATAAGACAACATATCCTATTGATGAGACTATGGTACACAATGGTCCACCTCATAGCTCCAATTTTGGATATAGCTATGCCAAAAGAATGATTGACGTTTTAAATCGAGGATACAATGAGTCTTATGGTTGTATGTTCACCTCAGTTATTCCTTGTAATGTGTTTGGGCCATACGACAACTTCAGTTTAGAATCCAGTCATGTAATACCGGCTCTTATAAGGAGGATGGATGATGCTATGCAAAAAGGTGATCCCACGTTCACAGTGATGGGAAGCGGCAAACCACTGCGACAGTTTATTTATTCATTAGATCTAGCCGAGCTGTTCATTTGGGTCCTCAGGAACTACAACAGTATCGAACCTATTATCTTATCAGTTGACGAAAAAGACGAAGTAACGATAAGCAGAGTGGCGGAGATGATTAAGCGAGCCCACGGATACGGCGGAGATATTGTCTATGACACGACCAGAGCCGACGGCCAGTACAAGAAGACCGCGTCCAACACTAAACTCAGAACTTTGTATGAAGATTTCGAATTTACGCCATTCGATAAAGCCATAGACGAGACTGTCAAATGGTTTAAATTGAATAAAAATAGCGCTAGACTATAA

Protein

MKLNGFKRGSQEGKKQRRFITIKMSDGNVVLVTGGSGLVGQAIKTVIERDRQKRNSDYDSETWIFSGSKDGDLRDKTQTEALFAKHKPTHVIHLAAMVGGLFHNMAHNLDFFRENMSINDNILQACHKYNVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHSSNFGYSYAKRMIDVLNRGYNESYGCMFTSVIPCNVFGPYDNFSLESSHVIPALIRRMDDAMQKGDPTFTVMGSGKPLRQFIYSLDLAELFIWVLRNYNSIEPIILSVDEKDEVTISRVAEMIKRAHGYGGDIVYDTTRADGQYKKTASNTKLRTLYEDFEFTPFDKAIDETVKWFKLNKNSARL

Uniprot

H9JY74   A0A2H1WUG7   A0A437BMI2   A0A2A4JI91   A0A212F867   A0A194QG44   + More
A0A2P8XQP5   A0A0N1I645   A0A2J7Q241   A0A067R980   A0A1B6MEY9   A0A1B6CZH8   E0W157   A0A154PK74   A0A2S2PXT9   D2A3S2   J3JXU2   A0A1B6F6Q5   A0A1S4EPN4   A0A146L414   A0A0M8ZX91   N6U1T5   K7J7J2   U4UI27   A0A0J7KPN6   A0A0L7R069   R4FQ79   A0A1W4WDM5   E2C9C1   A0A0P4VTX7   A0A026X2L2   A0A224XTX6   A0A1Y1LFZ0   A0A088AKI9   A0A336MDA6   A0A2A3EKW6   A0A182RTC6   F4W7F3   U5EW51   J9K3X5   C4WW44   A0A182L1K0   A0A336MFY6   A0A182LSJ5   A0A433QTR7   A0A151X8R0   A0A068S1Y7   A0A195DSN2   A0A151JSS2   A0A158NPU1   A0A1X2GZD1   A0A0C9QQ84   A0A195ATF3   A0A182WU56   A0A0B1TQS6   A0A182QA08   A0A182UK82   Q7Q3X9   E9IX38   A0A182Y056   A0A151I6V4   A0A433DGD1   A0A077WGJ2   A0A182HUR9   A0A023ENI9   A0A182V755   A0A182G4M7   A0A1Y1Y642   A0A182JYH6   A0A1Y1YY80   B4MJL3   A0A182PMN3   A0A182SVJ3   A0A182W757   F1LB29   A0A182GRM3   A0A3R7MB09   A0A2R7X266   A0A023F8E2   A0A162PUT5   B0W4F6   A0A1I8PTG2   A0A0C9MS07   Q16YA4   A0A084WFZ4   Q16FS9   A0A1Q3FFD6   A0A182J9T8   A0A1X2HR39   A0A2M4BTY2   A0A0C2CWK6   B4P8M0   A0A168J0R6   A0A433P8C3   A0A131YNE4   A0A224YXP5   A0A1E1XI47   S2JTA4   A0A2M4BUC0   C1BU94  

Pubmed

19121390    22118469    26354079    29403074    24845553    20566863    + More
18362917    19820115    22516182    26823975    23537049    20075255    20798317    27129103    24508170    30249741    28004739    21719571    20966253    30485448    21347285    12364791    14747013    17210077    21282665    25244985    24945155    26483478    17994087    21685128    25474469    17510324    24438588    17550304    26830274    28797301    28503490   

EMBL

BABH01042679    ODYU01011146    SOQ56708.1    RSAL01000033    RVE51458.1    NWSH01001373    + More
PCG71486.1    AGBW02009779    OWR49935.1    KQ459011    KPJ04384.1    PYGN01001516    PSN34327.1    KQ458522    KPJ05844.1    NEVH01019373    PNF22653.1    KK852805    KDR16135.1    GEBQ01005484    JAT34493.1    GEDC01018438    JAS18860.1    DS235866    EEB19363.1    KQ434943    KZC12256.1    GGMS01000977    MBY70180.1    KQ971348    EFA04892.1    BT128063    AEE63024.1    GECZ01023851    JAS45918.1    GDHC01017109    JAQ01520.1    KQ435808    KOX72980.1    APGK01052894    KB741216    ENN72517.1    KB632366    ERL93634.1    LBMM01004537    KMQ92312.1    KQ414672    KOC64222.1    ACPB03021815    GAHY01000559    JAA76951.1    GL453806    EFN75466.1    GDKW01001141    JAI55454.1    KK107021    QOIP01000011    EZA62328.1    RLU17002.1    GFTR01004997    JAW11429.1    GEZM01056965    GEZM01056964    JAV72543.1    UFQT01000745    SSX26889.1    KZ288217    PBC32367.1    GL887844    EGI69826.1    GANO01001579    JAB58292.1    ABLF02024681    AK341842    BAH72114.1    UFQS01001173    UFQT01001173    SSX09382.1    SSX29284.1    AXCM01007134    RBNJ01001419    RUS33180.1    KQ982409    KYQ56719.1    CBTN010000033    CDH55862.1    KQ980487    KYN15925.1    KQ982014    KYN30639.1    ADTU01022754    MCGN01000014    ORY89550.1    GBYB01005849    JAG75616.1    KQ976745    KYM75471.1    KN549353    KHJ98137.1    AXCN02000770    AAAB01008964    EAA12379.3    GL766616    EFZ14908.1    KQ978456    KYM93889.1    RBNI01001849    RUP49911.1    LK023321    CDS06741.1    APCN01002475    GAPW01002621    JAC10977.1    JXUM01144060    KQ569713    KXJ68536.1    MCFE01000233    ORX93500.1    MCFE01000051    ORY02988.1    CH963846    EDW72302.1    JI176029    ADY47333.1    JXUM01082743    JXUM01082744    JXUM01082745    KQ563334    KXJ74033.1    QCYY01001463    ROT77871.1    KK856492    PTY25894.1    GBBI01001142    JAC17570.1    KV440979    OAD74216.1    DS231837    EDS33539.1    DF836401    GAN06112.1    CH477519    EAT39623.1    ATLV01023414    KE525343    KFB49138.1    CH478383    EAT33092.1    GFDL01008792    JAV26253.1    MCGE01000056    ORZ01917.1    GGFJ01007399    MBW56540.1    KN739401    KIH54262.1    CM000158    EDW92237.1    AMYB01000007    OAD00604.1    RBNK01008187    RUS13786.1    GEDV01008469    JAP80088.1    GFPF01007947    MAA19093.1    GFAC01000517    JAT98671.1    KE124088    EPB83015.1    GGFJ01007400    MBW56541.1    BT078173    BT120592    HACA01025463    ACO12597.1    ADD24232.1    CDW42824.1   

Proteomes

UP000005204    UP000283053    UP000218220    UP000007151    UP000053268    UP000245037    + More
UP000235965    UP000027135    UP000009046    UP000076502    UP000007266    UP000079169    UP000053105    UP000019118    UP000002358    UP000030742    UP000036403    UP000053825    UP000015103    UP000192223    UP000008237    UP000053097    UP000279307    UP000005203    UP000242457    UP000075900    UP000007755    UP000007819    UP000075882    UP000075883    UP000075809    UP000027586    UP000078492    UP000078541    UP000005205    UP000242180    UP000078540    UP000076407    UP000075886    UP000075902    UP000007062    UP000076408    UP000078542    UP000075840    UP000075903    UP000069940    UP000249989    UP000193498    UP000075881    UP000007798    UP000075885    UP000075901    UP000075920    UP000283509    UP000077315    UP000002320    UP000095300    UP000053815    UP000008820    UP000030765    UP000075880    UP000193560    UP000002282    UP000077051    UP000014254   

PRIDE

H9JY74   

Pfam

PF01370   Epimerase

Interpro

IPR036291   NAD(P)-bd_dom_sf        + More
IPR001509   Epimerase_deHydtase       
IPR028614   GDP_fucose/colitose_synth       

SUPFAM

SSF51735   SSF51735       

CDD

cd05239  GDP_FS_SDR_e

ProteinModelPortal

H9JY74   A0A2H1WUG7   A0A437BMI2   A0A2A4JI91   A0A212F867   A0A194QG44   + More
A0A2P8XQP5   A0A0N1I645   A0A2J7Q241   A0A067R980   A0A1B6MEY9   A0A1B6CZH8   E0W157   A0A154PK74   A0A2S2PXT9   D2A3S2   J3JXU2   A0A1B6F6Q5   A0A1S4EPN4   A0A146L414   A0A0M8ZX91   N6U1T5   K7J7J2   U4UI27   A0A0J7KPN6   A0A0L7R069   R4FQ79   A0A1W4WDM5   E2C9C1   A0A0P4VTX7   A0A026X2L2   A0A224XTX6   A0A1Y1LFZ0   A0A088AKI9   A0A336MDA6   A0A2A3EKW6   A0A182RTC6   F4W7F3   U5EW51   J9K3X5   C4WW44   A0A182L1K0   A0A336MFY6   A0A182LSJ5   A0A433QTR7   A0A151X8R0   A0A068S1Y7   A0A195DSN2   A0A151JSS2   A0A158NPU1   A0A1X2GZD1   A0A0C9QQ84   A0A195ATF3   A0A182WU56   A0A0B1TQS6   A0A182QA08   A0A182UK82   Q7Q3X9   E9IX38   A0A182Y056   A0A151I6V4   A0A433DGD1   A0A077WGJ2   A0A182HUR9   A0A023ENI9   A0A182V755   A0A182G4M7   A0A1Y1Y642   A0A182JYH6   A0A1Y1YY80   B4MJL3   A0A182PMN3   A0A182SVJ3   A0A182W757   F1LB29   A0A182GRM3   A0A3R7MB09   A0A2R7X266   A0A023F8E2   A0A162PUT5   B0W4F6   A0A1I8PTG2   A0A0C9MS07   Q16YA4   A0A084WFZ4   Q16FS9   A0A1Q3FFD6   A0A182J9T8   A0A1X2HR39   A0A2M4BTY2   A0A0C2CWK6   B4P8M0   A0A168J0R6   A0A433P8C3   A0A131YNE4   A0A224YXP5   A0A1E1XI47   S2JTA4   A0A2M4BUC0   C1BU94  

PDB

4E5Y     E-value=1.81799e-110,     Score=1020

KEGG

101736955    K02377 GDP-L-fucose synthase [EC:1.1.1.271] | (RefSeq) GDP-L-fucose synthase

PATHWAY

00051    Fructose and mannose metabolism - Bombyx mori (domestic silkworm)
00520    Amino sugar and nucleotide sugar metabolism - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0050662   GO:0009226   GO:0016491   GO:0050577   GO:0033227   GO:0003824   GO:0005515   GO:0051103   GO:0005524   GO:0008270   GO:0042555   GO:0048384  

Length:

347

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.24983

Exp number, first 60 AAs:

0.90499

Total prob of N-in:

0.06920

outside

1  -  347

 

 

Pi

3.451985

Theta

13.535649

Tajima's D

-0.85177

CLR

0.533223

CSRT

0.165841707914604

Interpretation

Uncertain