SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03685
Pre Gene Modal
BGIBMGA013783
Annotation
AF461149_1_transposase_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 2.657
 

Sequence

CDS
ATGAAGACTCGTGTAGATGACAGGTCAAGAAGTGGTCGCCCTCGGTCTGTTAGGACTCCAGCAGTGATAAAAGCTGTGAAGGCGCGAATTCAAAGAAATCCCAAACGGAAGCAGAAACTGTTGGCCCTTCAGATGGGGTTAAGCAGAACCACGGTGAAAAGGGTGTTAAATGAAGACTTAGGGCTTCGGGCATATCGAAGAAAAACAGGACATCGTTTGAATGCTCGTCTAATGGACCTGAGACTGAAGAGATGCCGCGCTTTGTTGAAGCGGTACGCGGGAAAAAAATATCGGGAAATTCTTTTTTCGGATGAAAAATTTTTTACCGTAGAAGAGAGCTACAACAAACAAAATGATAAGGTGTACGCACACAGTAGTGAAGAAGCGAGCAACCGTATTCCGCGTGTCCAACGAGGTCATTTTCCATCCTCGCTCATGGTATGGTTGGAAGTTTCTTATTGGGGCTTAACAGAGGTACATTTTTGTGAGAAAGGTGTAAAATCGAATGCAGTTGTGTATCAAAATACAGTCCTGACGAACCTTGTGGAACCTGTTTCTCATACCATGTTCAATAACAGGCACTGGGTATTCCAACAAGATTCGGCGCCAGCTCATAGAGCGAAGAGCACACAAGACTGGCTGGCGGCGCGTGAAATCGACTTCATCCGGCACGAAGACTGGCCCTCCTCCAGTCCAGATTTGAATCCGTTAGATTACAAGATATGGCAACACTTGGAGGAAAAGGCGTGCTCAAAGCCTCATCCCAATTTGGAGTCACTCAAGACATCCTTGATTAAGGCAGCCGCCGATATTGACATGGACCTCGTTCGTACTGCGATAGACGACTGGCCGCGCAGATTGAAGGCCTGTATTCAAAATCACGGAGGTCATTTTGAATAA
Protein
MKTRVDDRSRSGRPRSVRTPAVIKAVKARIQRNPKRKQKLLALQMGLSRTTVKRVLNEDLGLRAYRRKTGHRLNARLMDLRLKRCRALLKRYAGKKYREILFSDEKFFTVEESYNKQNDKVYAHSSEEASNRIPRVQRGHFPSSLMVWLEVSYWGLTEVHFCEKGVKSNAVVYQNTVLTNLVEPVSHTMFNNRHWVFQQDSAPAHRAKSTQDWLAAREIDFIRHEDWPSSSPDLNPLDYKIWQHLEEKACSKPHPNLESLKTSLIKAAADIDMDLVRTAIDDWPRRLKACIQNHGGHFE

Summary

Similarity
Belongs to the TGF-beta family.
Belongs to the UDP-glycosyltransferase family.
EMBL
AF461149    AAN06610.1    AB363028    BAG15927.1    AB363006    AB363010    + More
AB363014    BAG15923.1    BAG15924.1    AB473770    BAH20555.1    AB363018    BAG15926.1    RSAL01001770    RVE40705.1    RSAL01000084    RVE48403.1    RSAL01000191    RVE44681.1    RSAL01000012    RVE53510.1    RSAL01000063    RVE49524.1    RSAL01000021    RVE52408.1    RSAL01000022    RVE52367.1    U47917    AAB47739.1    RSAL01000140    RVE46091.1    JF779677    AEO90418.1    RSAL01000073    RVE49012.1    RSAL01000039    RVE51021.1    RSAL01000392    RVE41996.1    RSAL01000133    RVE46339.1    RSAL01000470    RVE41612.1    RSAL01000016    RVE53060.1    RSAL01000236    RVE43715.1    LNIX01000030    OXA41211.1    RSAL01000677    RVE41245.1    JARK01001411    EYC06502.1    CAVP010059404    CDL95787.1    UYSL01019905    VDL71189.1    JARK01000255    EYC39473.1    PDUG01000005    PIC23776.1    JARK01001658    EYB84158.1    PIC28734.1    JARK01001337    EYC34439.1    DS268612    EFO94085.1    DS268747    EFP00909.1    PIC29926.1    PDUG01000001    PIC51673.1    PDUG01000006    PIC20538.1    JARK01000176    EYC41234.1    JARK01001345    EYC27589.1    PDUG01000004    PIC32571.1    DS268492    EFP11689.1    DS268508    EFO83264.1    DS268421    EFO88618.1    DS268679    EFO98285.1    JOJR01000015    RCN51257.1    DS268673    EFO98001.1    DS268466    EFP06959.1    DS268525    EFO85497.1    JARK01000059    EYC44525.1    JOJR01000583    RCN36166.1    UZAH01029309    VDP05368.1    DS268545    EFO88382.1    DS268428    EFO94379.1    UZAH01027257    VDO90094.1    PIC32570.1    PDUG01000012    PIC13506.1    UYSL01019770    VDL69590.1    UYSL01020440    VDL74616.1    JARK01001601    EYB87313.1    HE601047    HE600964    CAS00660.1    CAS01013.1    HE601437    CAR99651.1    KX931010    APL98300.1    HE601507    CAR99239.1   
Pfam
PF00019   TGF_beta        + More
PF16095   COR
PF00069   Pkinase
PF07992   Pyr_redox_2
PF00201   UDPGT
PF13358   DDE_3
PF00292   PAX
PF00250   Forkhead
PF10320   7TM_GPCR_Srsx
Interpro
IPR009057   Homeobox-like_sf        + More
IPR036259   MFS_trans_sf       
IPR001839   TGF-b_C       
IPR029034   Cystine-knot_cytokine       
IPR017948   TGFb_CS       
IPR015615   TGF-beta-rel       
IPR032171   COR       
IPR020859   ROC_dom       
IPR000719   Prot_kinase_dom       
IPR011047   Quinoprotein_ADH-like_supfam       
IPR011009   Kinase-like_dom_sf       
IPR008271   Ser/Thr_kinase_AS       
IPR027417   P-loop_NTPase       
IPR036188   FAD/NAD-bd_sf       
IPR023753   FAD/NAD-binding_dom       
IPR002213   UDP_glucos_trans       
IPR035595   UDP_glycos_trans_CS       
IPR038717   Tc1-like_DDE_dom       
IPR001523   Paired_dom       
IPR036388   WH-like_DNA-bd_sf       
IPR036390   WH_DNA-bd_sf       
IPR001766   Fork_head_dom       
IPR030456   TF_fork_head_CS_2       
IPR036906   ATPase_V1_fsu_sf       
IPR017452   GPCR_Rhodpsn_7TM       
IPR000276   GPCR_Rhodpsn       
IPR019424   7TM_GPCR_Srsx       
SUPFAM
SSF46689   SSF46689        + More
SSF103473   SSF103473       
SSF57501   SSF57501       
SSF56112   SSF56112       
SSF52540   SSF52540       
SSF50998   SSF50998       
SSF51905   SSF51905       
SSF46785   SSF46785       
PDB
5HOO     E-value=2.20163e-10,     Score=156

Ontologies

Topology

Subcellular location
Secreted  
Nucleus  
Length:
299
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0358100000000001
Exp number, first 60 AAs:
0.0013
Total prob of N-in:
0.24025
outside
1  -  299
 
 

Population Genetic Test Statistics

Pi
1.973258
Theta
4.314016
Tajima's D
-1.516278
CLR
188.803839
CSRT
0.0512474376281186
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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