Gene

KWMTBOMO03684

Annotation

PREDICTED:_protein_transport_protein_SFT2_[Plutella_xylostella]

Location

Bomo_Chr6(+):15569654-15572496      View in EpiBrowser

Full name

Vesicle transport protein      

Location in the cell

PlasmaMembrane   Reliability : 4.831

CDS

ATGGCAAATCTAAAATCAGATTTAGATCAATATTTGCTTCAAAACGAAAGTCGTCGGAGTTATAAATTTAGTTTACCAAGTTTTTCAACGCCTGCCTTCCTGTCTCGTAACACTGAGGAGACTCCGACGAGCACAACGAGCAGTTGGTTCGAAGAAGTACAGAAAGAGTATTTCACTTTGAGCAGAACACAACGATTCTTAGGATTTGGAATATGTCTATTTCTAGGAATCCTATGTTTCATACTATCATTTATCTACATACCAGTTCTTCTATTACAAGCTAGGAAATTTGCTCTACTGTTCACATTGGGAAGTTTATTCTTTATACTTAGTTTCAGCTTTCTCTACGGACCATGGGCACATTTGAAGTCAATGTTCTCAAAGGAAAGAGCTCTTACAACATCAATTTACAGTATAACTTTGATAGCGACATTATACTGTGCCTTACATCTTCAAAGTACACCGTGGACCATAGTATGTGCTGTCTTACAAGTCATGGCATTGTTCTGGATGATGATGGGGTCTATACCAGGAGGATCATCGGGCATGAGGTTCTTTGGAAGCATGTTCAAATCATCAGTTTCAAACACATTGCCGATTTAA

Protein

MANLKSDLDQYLLQNESRRSYKFSLPSFSTPAFLSRNTEETPTSTTSSWFEEVQKEYFTLSRTQRFLGFGICLFLGILCFILSFIYIPVLLLQARKFALLFTLGSLFFILSFSFLYGPWAHLKSMFSKERALTTSIYSITLIATLYCALHLQSTPWTIVCAVLQVMALFWMMMGSIPGGSSGMRFFGSMFKSSVSNTLPI

Description

May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex.

Similarity

Belongs to the SFT2 family.

Uniprot

A0A194RAE7   A0A1E1WDR2   S4PYG3   A0A194QLQ8   A0A2H1WCP2   A0A2A4JXG4   + More
A0A3S2PHA8   A0A212F4B4   D6WYV8   A0A1W4XQX0   A0A1Y1KBC2   A0A0T6AVM9   J3JYX2   A0A0L7RIX7   A0A2J7RQR9   A0A088AVN6   A0A2A3EK70   A0A0M9A527   A0A154PE65   A0A026WYA4   A0A067RPM5   A0A2P8ZNS9   A0A1B6KXL4   K7IRJ7   A0A3B0J9L0   A0A0V0GCT4   A0A0P4VSW6   R4G8M5   E2AGK8   A0A069DQ21   A0A023F999   A0A158P1S9   A0A0A9XJV9   B4P2A4   A0A224XKH8   A0A336MWH0   Q177W9   A0A2M4AKH4   A0A151J8M6   T1IC97   W5JMC6   U5EU38   A0A195ERF3   A0A1I8NMN1   B5DI31   B4G8F4   B0X4G7   A0A0L0CD12   A0A084VPD5   A0A1Q3FGL4   B4ICT0   B4Q5N4   Q6II06   A0A023EIA8   A8E703   B3MUC7   A0A151XAN7   B4MTV1   A8E718   B3N785   A0A182J1A8   A0A2M4BZU0   A0A1I8NI80   T1PKL8   A0A2M3Z9S9   A0A1W4V2R3   A0A034WJW2   A0A0K8VN95   A0A182NED7   A0A182Q9N7   Q7QG63   A0A182S4Q9   A0A182L5P2   A0A182MK60   A0A182V3E5   A0A182VV04   J9JZK0   A0A182IE28   A0A1B0CFN6   A0A1L8DUX7   A0A1B6CFX2   A0A182K822  

Pubmed

26354079    23622113    22118469    18362917    19820115    28004739    + More
22516182    23537049    24508170    30249741    24845553    29403074    20075255    27129103    20798317    26334808    25474469    21347285    25401762    26823975    17994087    17550304    17510324    20920257    23761445    15632085    26108605    24438588    22936249    10731132    12537568    12537572    12537573    12537574    14709175    16110336    17569856    17569867    26109357    26109356    24945155    26483478    25315136    25348373    12364791    14747013    17210077    20966253   

EMBL

KQ460500    KPJ14250.1    GDQN01005930    JAT85124.1    GAIX01003338    JAA89222.1    + More
KQ459011    KPJ04381.1    ODYU01007761    SOQ50807.1    NWSH01000430    PCG76466.1    RSAL01000033    RVE51455.1    AGBW02010402    OWR48575.1    KQ971363    EFA09012.1    GEZM01087262    JAV58812.1    LJIG01022692    KRT79219.1    APGK01057128    BT128453    KB741277    KB632243    AEE63410.1    ENN71295.1    ERL90552.1    KQ414582    KOC70815.1    NEVH01000618    PNF43182.1    KZ288220    PBC32203.1    KQ435745    KOX76616.1    KQ434874    KZC09714.1    KK107069    QOIP01000002    EZA60726.1    RLU25979.1    KK852544    KDR21649.1    PYGN01000008    PSN58167.1    GEBQ01023805    JAT16172.1    OUUW01000004    SPP78954.1    GECL01000236    JAP05888.1    GDKW01000329    JAI56266.1    GAHY01000712    JAA76798.1    GL439322    EFN67428.1    GBGD01002959    JAC85930.1    GBBI01000636    JAC18076.1    ADTU01006781    GBHO01023668    GBRD01001100    GDHC01019158    JAG19936.1    JAG64721.1    JAP99470.1    CM000157    EDW87100.1    GFTR01003441    JAW12985.1    UFQT01001383    SSX30308.1    CH477370    EAT42456.1    GGFK01007962    MBW41283.1    KQ979492    KYN21213.1    ACPB03027240    ADMH02001016    ETN64448.1    GANO01004054    JAB55817.1    KQ982021    KYN30482.1    CH379060    EDY69969.1    CH479180    EDW28634.1    DS232340    EDS40320.1    JRES01000673    KNC29354.1    ATLV01014998    KE524999    KFB39829.1    GFDL01008356    JAV26689.1    CH480829    EDW45356.1    CM000361    CM002910    EDX03184.1    KMY87255.1    AE014134    BK003260    AAZ66445.1    DAA03459.1    JXUM01013126    GAPW01004465    KQ560369    JAC09133.1    KXJ82757.1    BT030945    ABV82327.1    CH902624    EDV33456.1    KQ982335    KYQ57442.1    CH963852    EDW75540.1    BT030960    ABV82342.1    CH954177    EDV57192.1    GGFJ01009444    MBW58585.1    KA648478    AFP63107.1    GGFM01004548    MBW25299.1    GAKP01003091    JAC55861.1    GDHF01011960    JAI40354.1    AXCN02000860    AAAB01008839    EAA05881.3    AXCM01007640    ABLF02023678    APCN01004556    AJWK01010201    GFDF01003847    JAV10237.1    GEDC01025063    GEDC01000536    JAS12235.1    JAS36762.1   

Proteomes

UP000053240    UP000053268    UP000218220    UP000283053    UP000007151    UP000007266    + More
UP000192223    UP000019118    UP000030742    UP000053825    UP000235965    UP000005203    UP000242457    UP000053105    UP000076502    UP000053097    UP000279307    UP000027135    UP000245037    UP000002358    UP000268350    UP000000311    UP000005205    UP000002282    UP000008820    UP000078492    UP000015103    UP000000673    UP000078541    UP000095300    UP000001819    UP000008744    UP000002320    UP000037069    UP000030765    UP000001292    UP000000304    UP000000803    UP000069940    UP000249989    UP000007801    UP000075809    UP000007798    UP000008711    UP000075880    UP000095301    UP000192221    UP000075884    UP000075886    UP000007062    UP000075900    UP000075882    UP000075883    UP000075903    UP000075920    UP000007819    UP000075840    UP000092461    UP000075881   

PRIDE

Q6II06   

Pfam

PF04178   Got1        + More
PF13270   DUF4061

Interpro

IPR007305   Vesicle_transpt_Got1/SFT2        + More
IPR011691   Vesicle_transpt_SFT2       
IPR013087   Znf_C2H2_type       
IPR036236   Znf_C2H2_sf       
IPR036259   MFS_trans_sf       
IPR025271   DUF4061       
IPR020846   MFS_dom       

SUPFAM

SSF57667   SSF57667        + More
SSF103473   SSF103473       

CDD

cd06174  MFS

ProteinModelPortal

A0A194RAE7   A0A1E1WDR2   S4PYG3   A0A194QLQ8   A0A2H1WCP2   A0A2A4JXG4   + More
A0A3S2PHA8   A0A212F4B4   D6WYV8   A0A1W4XQX0   A0A1Y1KBC2   A0A0T6AVM9   J3JYX2   A0A0L7RIX7   A0A2J7RQR9   A0A088AVN6   A0A2A3EK70   A0A0M9A527   A0A154PE65   A0A026WYA4   A0A067RPM5   A0A2P8ZNS9   A0A1B6KXL4   K7IRJ7   A0A3B0J9L0   A0A0V0GCT4   A0A0P4VSW6   R4G8M5   E2AGK8   A0A069DQ21   A0A023F999   A0A158P1S9   A0A0A9XJV9   B4P2A4   A0A224XKH8   A0A336MWH0   Q177W9   A0A2M4AKH4   A0A151J8M6   T1IC97   W5JMC6   U5EU38   A0A195ERF3   A0A1I8NMN1   B5DI31   B4G8F4   B0X4G7   A0A0L0CD12   A0A084VPD5   A0A1Q3FGL4   B4ICT0   B4Q5N4   Q6II06   A0A023EIA8   A8E703   B3MUC7   A0A151XAN7   B4MTV1   A8E718   B3N785   A0A182J1A8   A0A2M4BZU0   A0A1I8NI80   T1PKL8   A0A2M3Z9S9   A0A1W4V2R3   A0A034WJW2   A0A0K8VN95   A0A182NED7   A0A182Q9N7   Q7QG63   A0A182S4Q9   A0A182L5P2   A0A182MK60   A0A182V3E5   A0A182VV04   J9JZK0   A0A182IE28   A0A1B0CFN6   A0A1L8DUX7   A0A1B6CFX2   A0A182K822  

KEGG

101743150    no KO assigned | (RefSeq) protein transport protein SFT2

GO

GO:0016192   GO:0016021   GO:0015031   GO:0003676   GO:0000139   GO:0042147   GO:0005829   GO:0003884   GO:0046416   GO:0005515   GO:0051103   GO:0005524   GO:0008270   GO:0042555   GO:0048384  

PANTHER

PTHR23137  

Subcellular location

Membrane  

Length:

200

Number of predicted TMHs:

4

Exp number of AAs in TMHs:

86.98918

Exp number, first 60 AAs:

0.00729

Total prob of N-in:

0.28738

inside

1  -  64

TMhelix

65  -  87

outside

88  -  96

TMhelix

97  -  119

inside

120  -  130

TMhelix

131  -  153

outside

154  -  156

TMhelix

157  -  179

inside

180  -  200

 

 

Pi

23.75796

Theta

22.560826

Tajima's D

0.157342

CLR

1.261185

CSRT

0.419079046047698

Interpretation

Uncertain