SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03679  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA002216
Annotation
PREDICTED:_THAP_domain-containing_protein_5_isoform_X1_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.95 Nuclear   Reliability : 2.069
 

Sequence

CDS
ATGTCGGAACCAGAGCAAACTCAGGGTGGTGGAGGTGGTGAGGGTGTAGCACCAGCATCAGCGCCTAGTGAGGAACAACCAACGTTCGTAGTTGTAAAGATAGAAACGTTCGAGCCTATCTCAGCCGATGCTGAAACAGAGCAGCCCGAAGGAACAGAGAAGGAAGCCTCAGCAGACAAGCCGGTTGAGAACAATCAAACAGAAACAAAGGCTGGCAACACTGATGACGTCATCGACAATAACGCACCGGCCATCAAAATTGAGGGAGACTGGCAGCAAAGGGAGAAGGAGCTCCTCGAGAAGATCAACGAGCTGGAGAAGGTGAAGAGCGACACGGCCGAGAGCGGACTCCGCCTCGAGCTCAAGGTGAAAGAGGAAGAGATAGACTTGCTCAAGGCGAGGGTCAAGAACTTGGAGACGGAGTTGCAGGCGGCCCTGGCCAAGCCCGGGGGGAAGAACCAAGACATCATCAACAGCATCAAGCTGCAACACGAGGAGCTCCTGAGCAAAGCGAGAGGCATGATCTTCGACAAGACGAAGCTGGTCAAGAATCAGGAGTTGCAGATAGAAGCTCTGACCACGCAAGTAGCGTCGCTGAAGGACATCAACCAGATCACTAAGGATCTGCTGGAGATCAGGAATTCTGAAGTTAAGGCCATGGAGGACCGCTTCCAAGCGATGGAGGCGCGCTACAAGGCGGAGAAGGAGCGATACGACCTGGTGCTGAAGCGCGCCCAGACCAGCACCACCATCAACGACGACCTCAAGAAGGAGTACGAAACTCAACTCGCTATATTTAAGGAATTGAGAGAGAAATACGAACAAAGAGTGAAAGCTCTAGTCGCTGAAAACGAGAGGCTGAAAGCTCCGACTCAGGGCGGAAGCTCGACGTGA
Protein
MSEPEQTQGGGGGEGVAPASAPSEEQPTFVVVKIETFEPISADAETEQPEGTEKEASADKPVENNQTETKAGNTDDVIDNNAPAIKIEGDWQQREKELLEKINELEKVKSDTAESGLRLELKVKEEEIDLLKARVKNLETELQAALAKPGGKNQDIINSIKLQHEELLSKARGMIFDKTKLVKNQELQIEALTTQVASLKDINQITKDLLEIRNSEVKAMEDRFQAMEARYKAEKERYDLVLKRAQTSTTINDDLKKEYETQLAIFKELREKYEQRVKALVAENERLKAPTQGGSST

Summary

Ontologies

GO

Topology

Length:
297
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.01525
outside
1  -  297
 
 

Population Genetic Test Statistics

Pi
3.277294
Theta
21.977541
Tajima's D
-1.151108
CLR
1.355531
CSRT
0.105544722763862
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
25044914 EAQEWIEGVIGAK 100.00 4e-04
25044914 AGNQTATTVAISCIK 100.00 6e-04
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