Gene

KWMTBOMO03677  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA002215

Annotation

mitochondrial_import_inner_membrane_translocase_[Bombyx_mori]

Location

Bomo_Chr6(+):15338160-15339592      View in EpiBrowser

Full name

Mitochondrial import inner membrane translocase subunit TIM17      

Location in the cell

PlasmaMembrane   Reliability : 2.419

CDS

ATGGATGAATATACAAGAGAACCATGCCCGTGGCGTATCCTTGATGACTCTGGCGGTGCGTTTATAATGGGAGCGATCGGTGGTGGACTATTTCATTCGATAAAAGGTTTCAGAAACGCACCACTAGGCTTCAGTAGAAAAATGCTTGGCAGTTTGGCTGCAGTAAAGGAGCGCTCTCCAATAGTCGGGGGTAATTTTGCTGTTTGGGGTGGTATGTTCTCTACCATAGACTGCTCACTTGTGTACATGAGGCAAAAGGAAGATCCATGGAATTCCATTATGAGTGGAGCCCTCACGGGGGGTATCCTGGCTGCAAGAAATGGTGTACCGGCAATGGCAGGAAGTGCACTTATTGGAGGAATTCTCTTAGCTCTAATAGAAGGCATTGGTATCATGTTCACAAGATTAACGGCTGAACAGTTCAAACCACAGCAACCGATATTTGAAGATCCTTCCATCTTAGGTCAAAGTCAAGGACAGGCTCAGTCTTACCAATAG

Protein

MDEYTREPCPWRILDDSGGAFIMGAIGGGLFHSIKGFRNAPLGFSRKMLGSLAAVKERSPIVGGNFAVWGGMFSTIDCSLVYMRQKEDPWNSIMSGALTGGILAARNGVPAMAGSALIGGILLALIEGIGIMFTRLTAEQFKPQQPIFEDPSILGQSQGQAQSYQ

Description

Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.

Subunit

Component of the TIM23 complex, at least composed of TIM23, TIM17, TIM50 and TIM21.

Similarity

Belongs to the Tim17/Tim22/Tim23 family.

Uniprot

A1YM12   A0A1E1WKI1   H9IY82   A0A2H1WZD1   A0A212EI53   A0A2A4J445   + More
A0A0L7LUX6   A0A3S2LQ04   A0A194R9S0   A0A194QFW4   D6WC44   A0A067R9T4   J3JZJ5   E0V9Q7   A0A1Y1LT43   A0A1W4X060   A0A2J7RRV9   R4UWQ2   A0A2P8XZ59   U4UDS1   N6T5A0   A0A1Q3FET8   A0A1Q3EUH1   A0A182F8R4   A0A1I8N6W0   A0A2R7WEI0   A0A131YVS4   T1EAY1   A0A1W7R9F2   A0A182VPX0   Q7Q505   A0A182ICU7   L7M470   A0A182LQ69   B0WA32   A0A182YEQ2   A0A182PST0   A0A182RE76   A0A131XKM1   A0A023GII9   A0A1E1XU79   A0A0C9R0F6   A0A023FHD6   B4JHT0   U5EXW6   A2I481   A0A1I8PE66   A0A0A9YBT5   A0A2M4C1S7   A0A1L8EDX7   B4K4E3   A0A182NE23   A0A1L8EDX9   A0A2M4AJP5   A0A2M4CUJ9   A0A182TCL7   A0A0K8TQQ9   K7J1B9   T1D505   T1DF66   Q1DGM3   A0A2M3Z956   Q1DGM4   T1D503   A0A1L8DUR5   A0A084W800   A0A224Y060   A0A0V0G5L8   A0A023FAX5   A0A161M5P0   B7PRR2   A0A0K8R3C9   A0A069DPP7   A0A023EIK0   A0A1B0D1V3   A0A2R5LKE1   A0A232FHP3   W8CDT2   A0A076KUF2   A0A1E1WZA9   R4G3A6   A0A0A1X126   A0A1B6HYS7   B3MWW8   A0A0K8U6B0   A0A034WAD8   A0A0C9QX77   A0A3S3PV23   A0A1A9W2N0   A0A3R7PXA5   C9W1R7   A0A1A9VM27   A0A1B0AHG0   A0A1B0GG46   A0A1A9Y7H7   A0A1B0AKG1   B3NJ57   A0A0P5R5N0   B4NA10   E2B5U7  

Pubmed

19121390    22118469    26227816    26354079    18362917    19820115    + More
24845553    22516182    20566863    28004739    29403074    23537049    25315136    26830274    12364791    14747013    17210077    25576852    20966253    25244985    28049606    29209593    26131772    17994087    25401762    26823975    26369729    20075255    24330624    17510324    24438588    25474469    26334808    24945155    28648823    24495485    28503490    25830018    25348373    20650005    24029695    20798317   

EMBL

EF105370    ABM05495.1    GDQN01004264    GDQN01003616    JAT86790.1    JAT87438.1    + More
BABH01038367    ODYU01012243    SOQ58450.1    AGBW02014704    OWR41166.1    NWSH01003523    PCG66172.1    JTDY01000039    KOB79245.1    RSAL01000033    RVE51451.1    KQ460500    KPJ14254.1    KQ459011    KPJ04377.1    KQ971316    EEZ98758.2    KK852651    KDR19420.1    BT128677    AEE63634.1    DS234995    EEB10092.1    GEZM01047504    GEZM01047503    JAV76823.1    NEVH01000598    PNF43552.1    KC740917    AGM32741.1    PYGN01001136    PSN37285.1    KB632237    ERL90448.1    APGK01043658    KB741015    ENN75364.1    GFDL01008990    JAV26055.1    GFDL01016139    JAV18906.1    KK854549    PTY16755.1    GEDV01005234    JAP83323.1    GAMD01000658    JAB00933.1    GFAH01000620    JAV47769.1    AAAB01008961    EAA11986.3    EGK97290.1    APCN01009014    GACK01007135    JAA57899.1    DS231868    EDS40765.1    GEFH01001669    JAP66912.1    GBBM01002848    JAC32570.1    GFAA01000566    JAU02869.1    GBZX01002305    JAG90435.1    GBBK01004037    JAC20445.1    CH916369    EDV93919.1    GANO01000735    JAB59136.1    EF070584    ABM55650.1    GBHO01014528    GBRD01017102    GDHC01005739    JAG29076.1    JAG48725.1    JAQ12890.1    GGFJ01009777    MBW58918.1    GFDG01001892    JAV16907.1    CH933806    EDW13895.1    GFDG01001888    JAV16911.1    GGFK01007517    MBW40838.1    GGFL01004757    MBW68935.1    GDAI01000914    JAI16689.1    GALA01000748    JAA94104.1    GALA01000752    JAA94100.1    CH901256    CH477631    EAT32302.1    EAT38062.1    GGFM01004207    MBW24958.1    EAT32303.1    EAT38063.1    GALA01000753    JAA94099.1    GFDF01003911    JAV10173.1    ATLV01021335    KE525316    KFB46344.1    GFTR01002675    JAW13751.1    GECL01002831    JAP03293.1    GBBI01000634    JAC18078.1    GEMB01002177    GEMB01002176    JAS01003.1    ABJB010900850    ABJB011072082    DS774495    EEC09284.1    GADI01008272    GEFM01001789    JAA65536.1    JAP74007.1    GBGD01003292    JAC85597.1    GAPW01004827    GEHC01000355    JAC08771.1    JAV47290.1    AJVK01022393    GGLE01005823    MBY09949.1    NNAY01000213    OXU29978.1    GAMC01001401    JAC05155.1    KF433680    AII98001.1    GFAC01006866    JAT92322.1    GAHY01001851    JAA75659.1    GBXI01009686    JAD04606.1    GECU01027889    JAS79817.1    CH902627    EDV33948.1    GDHF01030434    JAI21880.1    GAKP01007842    JAC51110.1    GBYB01008394    JAG78161.1    NCKU01002869    NCKU01002730    RWS08646.1    RWS08911.1    QCYY01000233    ROT85606.1    EZ406219    ACX54014.1    CCAG010012075    JXJN01025262    CH954178    EDV52840.1    GDIQ01107361    GDIP01050172    LRGB01000725    JAL44365.1    JAM53543.1    KZS16259.1    CH964232    EDW81765.1    GL445887    EFN88916.1   

Proteomes

UP000005204    UP000007151    UP000218220    UP000037510    UP000283053    UP000053240    + More
UP000053268    UP000007266    UP000027135    UP000009046    UP000192223    UP000235965    UP000245037    UP000030742    UP000019118    UP000069272    UP000095301    UP000075920    UP000007062    UP000075840    UP000075882    UP000002320    UP000076408    UP000075885    UP000075900    UP000001070    UP000095300    UP000009192    UP000075884    UP000075901    UP000002358    UP000008820    UP000030765    UP000001555    UP000092462    UP000215335    UP000007801    UP000285301    UP000091820    UP000283509    UP000078200    UP000092445    UP000092444    UP000092443    UP000092460    UP000008711    UP000076858    UP000007798    UP000008237   

PRIDE

A1YM12    H9IY82   

Interpro

IPR005678   Tim17       

ProteinModelPortal

A1YM12   A0A1E1WKI1   H9IY82   A0A2H1WZD1   A0A212EI53   A0A2A4J445   + More
A0A0L7LUX6   A0A3S2LQ04   A0A194R9S0   A0A194QFW4   D6WC44   A0A067R9T4   J3JZJ5   E0V9Q7   A0A1Y1LT43   A0A1W4X060   A0A2J7RRV9   R4UWQ2   A0A2P8XZ59   U4UDS1   N6T5A0   A0A1Q3FET8   A0A1Q3EUH1   A0A182F8R4   A0A1I8N6W0   A0A2R7WEI0   A0A131YVS4   T1EAY1   A0A1W7R9F2   A0A182VPX0   Q7Q505   A0A182ICU7   L7M470   A0A182LQ69   B0WA32   A0A182YEQ2   A0A182PST0   A0A182RE76   A0A131XKM1   A0A023GII9   A0A1E1XU79   A0A0C9R0F6   A0A023FHD6   B4JHT0   U5EXW6   A2I481   A0A1I8PE66   A0A0A9YBT5   A0A2M4C1S7   A0A1L8EDX7   B4K4E3   A0A182NE23   A0A1L8EDX9   A0A2M4AJP5   A0A2M4CUJ9   A0A182TCL7   A0A0K8TQQ9   K7J1B9   T1D505   T1DF66   Q1DGM3   A0A2M3Z956   Q1DGM4   T1D503   A0A1L8DUR5   A0A084W800   A0A224Y060   A0A0V0G5L8   A0A023FAX5   A0A161M5P0   B7PRR2   A0A0K8R3C9   A0A069DPP7   A0A023EIK0   A0A1B0D1V3   A0A2R5LKE1   A0A232FHP3   W8CDT2   A0A076KUF2   A0A1E1WZA9   R4G3A6   A0A0A1X126   A0A1B6HYS7   B3MWW8   A0A0K8U6B0   A0A034WAD8   A0A0C9QX77   A0A3S3PV23   A0A1A9W2N0   A0A3R7PXA5   C9W1R7   A0A1A9VM27   A0A1B0AHG0   A0A1B0GG46   A0A1A9Y7H7   A0A1B0AKG1   B3NJ57   A0A0P5R5N0   B4NA10   E2B5U7  

PDB

6GCS     E-value=0.0813275,     Score=78

KEGG

100037444    K17795 mitochondrial import inner membrane translocase subunit TIM17 | (RefSeq) mitochondrial import

GO

GO:0016021   GO:0031305   GO:0005744   GO:0030150   GO:0006886   GO:0015450   GO:0006626   GO:0005739  

Subcellular location

Mitochondrion inner membrane  

Length:

165

Number of predicted TMHs:

3

Exp number of AAs in TMHs:

58.9624

Exp number, first 60 AAs:

17.93285

Total prob of N-in:

0.29089

POSSIBLE N-term signal

sequence

outside

1  -  19

TMhelix

20  -  42

inside

43  -  60

TMhelix

61  -  83

outside

84  -  110

TMhelix

111  -  133

inside

134  -  165

 

 

Pi

14.859272

Theta

12.372893

Tajima's D

0.658276

CLR

6.661866

CSRT

0.574071296435178

Interpretation

Uncertain