Gene

KWMTBOMO03673

Annotation

PREDICTED:_WD_repeat-containing_protein_44_[Bombyx_mori]

Location

Bomo_Chr6(+):15298180-15309304      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.689

CDS

ATGGGCGACAGCAGCGATTCCGAGGAGTTTTATGATGCTGAAGAGTTTACACCCACCAAGGGCTCGAAAAGGTCATCTCTGTGTAAAAGCACGAGTGTGACAGAGAGTTCTGATGTGCCAGTTCAGGACAAAACAAAAATCACAAATACTGATCAAACATTGCCCGTTGGAACCAGTACGCCCACAGCCGAAGTCACTCCCGAAGATGATAGGAATTCTATTAAAAATGTGGTGCAAGGCAGAAGACGATTTCAAGAGCTGCGCCGTTGCATGCAAACTGAAGAGGATGATGAAGGGATTCCTGAATTAGACAATGATCAACAGACATATACTTTAGAACATCCATTTAAAGTAATAGCCCACGATACTATGAGCTTGCAGAGTATGACGTCACTCGGCAGAATTGGAAGGATACTAAGCGGAGCTGCTGAATCTCAACCAAACATTCGCGATTCCACGACCGGCCAGTGCTCGTCGCGAGAACCTTCCACCATATCCGACGACCCCGTCCATACAGACTGTCGAACTCAGAACGACAAGCTGCATGGCTCTCAGTCGTTGTCGCGCGGAGAGGGCGATGACGTCAGCATCTGCACCACCGACACAGACGAGATCCGATATGTGCCGAGGCGAGCGGGAGACATACCCGGTCTGGACTCTCTCGTTGTAGAGCCCCCACCGTCTAGTTCGGCGAACCAGTCCATGGCTCTACCCAGCCCGGCCAGCACCATAGAATCGCTAACCAGAGAATTTCAAGACTCATTGGAATTATCCCAATCTAAATATGCTAGCGACCGCTCGTCCCCTGAGTGGTCGGGCGTTGCCGCCGCGCGCCCCCGGAAGGACTCCACCCTTGACATCAAACACGCCCTGAGAGGCGAATACGTGGTGAAGCCTTCAGACGACGACCGGGTCCGCAGCTCCGGCTCCAGGACTCACAGCGAGAGTCGGACGGCGCCGACCACGGGACATTCGAGTCTGGGATCCGGGAACAAGTACGGTCTTTAG

Protein

MGDSSDSEEFYDAEEFTPTKGSKRSSLCKSTSVTESSDVPVQDKTKITNTDQTLPVGTSTPTAEVTPEDDRNSIKNVVQGRRRFQELRRCMQTEEDDEGIPELDNDQQTYTLEHPFKVIAHDTMSLQSMTSLGRIGRILSGAAESQPNIRDSTTGQCSSREPSTISDDPVHTDCRTQNDKLHGSQSLSRGEGDDVSICTTDTDEIRYVPRRAGDIPGLDSLVVEPPPSSSANQSMALPSPASTIESLTREFQDSLELSQSKYASDRSSPEWSGVAAARPRKDSTLDIKHALRGEYVVKPSDDDRVRSSGSRTHSESRTAPTTGHSSLGSGNKYGL

Uniprot

H9IY80   A0A2A4JD75   A0A2H1WG24   A0A212EI28   A0A194QG34   A0A2J7QG05   + More
K7J4S6   A0A026WTE1   A0A2J7QG27   A0A232EVK1   A0A0T6B5S2   D6WEM4   A0A1B6J4S3   A0A0L7QZE0   A0A310SST0   A0A0J7KNW1   A0A088AES2   A0A1B6FDJ7   A0A1Y1L648   E0VKN1   A0A195BAJ5   A0A0M9A972   E9JCH8   U4UBN7   F4WRC3   A0A151I6H4   A0A195FJG0   A0A151WRG5   E2BP70   A0A151J2Y0   A0A2A3EC15   A0A154PKU5   V5GX89   A0A0P5QA65   A0A0P5CED9   A0A0P5IJA5   A0A0P5S813   A0A0P5R4K2   A0A0P5R5I4   T1JI81   A0A0P5BAU2   A0A0P4ZZB3   A0A0P5WVA2   A0A0P5Y808  

Pubmed

19121390    22118469    26354079    20075255    24508170    30249741    + More
28648823    18362917    19820115    28004739    20566863    21282665    23537049    21719571    20798317   

EMBL

BABH01038369    BABH01038370    NWSH01001884    PCG69799.1    ODYU01008429    SOQ52029.1    + More
AGBW02014704    OWR41163.1    KQ459011    KPJ04374.1    NEVH01014836    PNF27520.1    AAZX01007335    KK107109    QOIP01000008    EZA59330.1    RLU19875.1    PNF27521.1    NNAY01001991    OXU22367.1    LJIG01009640    KRT82676.1    KQ971326    EEZ99884.1    GECU01013541    JAS94165.1    KQ414681    KOC63994.1    KQ760545    OAD59970.1    LBMM01004995    KMQ91929.1    GECZ01021473    JAS48296.1    GEZM01065953    GEZM01065952    GEZM01065950    GEZM01065947    JAV68281.1    DS235250    EEB13937.1    KQ976532    KYM81571.1    KQ435710    KOX79780.1    GL771831    EFZ09477.1    KB632237    ERL90472.1    GL888284    EGI63340.1    KQ978473    KYM93717.1    KQ981512    KYN40800.1    KQ982806    KYQ50440.1    GL449553    EFN82490.1    KQ980314    KYN16681.1    KZ288301    PBC28832.1    KQ434948    KZC12475.1    GALX01002069    JAB66397.1    GDIQ01117029    JAL34697.1    GDIP01175464    JAJ47938.1    GDIQ01213542    JAK38183.1    GDIQ01108130    JAL43596.1    GDIQ01105777    JAL45949.1    GDIQ01110768    JAL40958.1    JH431152    GDIP01187069    JAJ36333.1    GDIP01206366    JAJ17036.1    GDIP01093138    JAM10577.1    GDIP01062489    JAM41226.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000053268    UP000235965    UP000002358    + More
UP000053097    UP000279307    UP000215335    UP000007266    UP000053825    UP000036403    UP000005203    UP000009046    UP000078540    UP000053105    UP000030742    UP000007755    UP000078542    UP000078541    UP000075809    UP000008237    UP000078492    UP000242457    UP000076502   

PRIDE

H9IY80   

Pfam

PF00400   WD40

Interpro

IPR020472   G-protein_beta_WD-40_rep        + More
IPR036322   WD40_repeat_dom_sf       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR001680   WD40_repeat       
IPR017986   WD40_repeat_dom       
IPR040324   WDR44/Dgr2       

SUPFAM

SSF50978   SSF50978       

Gene 3D

2.130.10.10    

ProteinModelPortal

H9IY80   A0A2A4JD75   A0A2H1WG24   A0A212EI28   A0A194QG34   A0A2J7QG05   + More
K7J4S6   A0A026WTE1   A0A2J7QG27   A0A232EVK1   A0A0T6B5S2   D6WEM4   A0A1B6J4S3   A0A0L7QZE0   A0A310SST0   A0A0J7KNW1   A0A088AES2   A0A1B6FDJ7   A0A1Y1L648   E0VKN1   A0A195BAJ5   A0A0M9A972   E9JCH8   U4UBN7   F4WRC3   A0A151I6H4   A0A195FJG0   A0A151WRG5   E2BP70   A0A151J2Y0   A0A2A3EC15   A0A154PKU5   V5GX89   A0A0P5QA65   A0A0P5CED9   A0A0P5IJA5   A0A0P5S813   A0A0P5R4K2   A0A0P5R5I4   T1JI81   A0A0P5BAU2   A0A0P4ZZB3   A0A0P5WVA2   A0A0P5Y808  

KEGG

101737631    K20241 WD repeat-containing protein 44 | (RefSeq) WD repeat-containing protein 44

GO

GO:0017137  

PANTHER

PTHR14221  

Length:

335

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00558

outside

1  -  335

 

 

Pi

25.18463

Theta

25.552928

Tajima's D

0.051349

CLR

0.349162

CSRT

0.388330583470826

Interpretation

Uncertain