Gene

KWMTBOMO03672

Annotation

PREDICTED:_uncharacterized_protein_LOC103314804_[Tribolium_castaneum]

Location

Bomo_Chr6(+):15273930-15277724      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.029 PlasmaMembrane   Reliability : 1.849

CDS

ATGCCGCCTAAATCTAATAAATCCGAGAACGATTTGAAGCTTTTGTACGCTAAGAGGGATATGATTTATTCACGCGTGCAAACAATTTGTGATAATGCACTTAAGATATCCGACTTAGCAATACGAGACTCATTTCTTTGTTCTATTGAAAACATAGACGATTTGCGCGCGGATTTCGAAAGTATCGTTCATAATATCAACGCATTGCAATTAGAACTAGATCCTGATTACGCCGTCAGTTACTCTGTTATGTCGTCGTTTGATGATCTATATTGCCGTATAAAACGTGTCGCTAAATCTTTAGGAAAAATACCTAGCGCCGGGTATTCGCAAACGGAACCTAAGTTCACCCGCGATAGACCTAGACTACCGCCTATCCACATACCCGAATTTAATGGGGACATCCGTAATTGGGGTTTATTTATAGATAGTTTTGAAAATACAGTAAATCAAAATGATCACTTAACCGATCACGAAAAATTACACTACTTAGTAGAAAAACTTACCGGCAAAGCCCGTGCGGCTTGCGCGGGAATTACGTTTAGTGCCGAAAACTATTCTTTGATTTTGAACACACTCAAAGCCAAATATGAAGATAAACGGTTGATAGCTACCGCGTACCTGGATCAGTTGTTCGAATTAAAACCTATTTTATCGTGTACCGAACAGAATTTGGAGAAATTCTTAGACATATTTGCATCATCTGTTCGGGCTATTAGAAATCTCAACGTCAATGACCTCAGCGACTTTTTATTTTTGTACATTGGCTTAAAAAAGTTAGATTTCGAAACTGTTCGCTTATTTGAAACGAATCAGGGTACTAAGGGTATTGAATTGCCGAAATTTAATGAATTGGAATCATTTTTACGTAATCACATAAGAATACTTCAGCGTACTACGCGACCTCACGAGGTCCCGAAAAGACAACCAGAAAGGCATTTAGAAACGTCTTCAAGACCGCTTAGAACGACTCATAGCTATGTAAATACCGCGGCGTTGCCTGCGTCCGTGCCCGCCAAGTCGACTTGTTTTCTGTGCAAATCTTATCATACACAGTTGTATCAGTGTGCTGAGTTTTTGAAATTGTCGCCTAAAAATCGTTATGATTTTGTTCGCACAAATAACTTGTGTTTAAACTGCCTTAGTGATAAACATCGCGTTGGTGTGTGTAATAGTAGCCATAGTTGTCGCAAATGTTCGTTGAAGCATCATACCTTGCTTCATTTTGATAAAAATAATAATATAGTAGCCAATAGAACTACAAGCGCAGGTAATCAACCAATGTATGGTAACTCGTCGCTAGCAGTATCAAGCTCGGAGCACTCGCATGGTCGAACTCACGCTGGCGGCACCGCACGTTGTACGACACATCTCGCGCGTCCGACGTATTCACCCGCGCTTCCCGCCGCTGCTGTCGCTGCCGCTCGCACAGACAGCTCCGCAGCTATCAACTCGGACGGCAACACAAATGACGTCACATTATGCTCGCTGTCTTCCGCTCGCTTACCTACAACTGTTTTGCTTGCGACCGCTCGAGTTGTAATGGTTGATACTTATGGCAAACCGCATCTTGTTCGCGCCCTTTTAGATAGCGCCTCACAGAGTAATTTTATTACTCGTGAATGTTGTCAACGCCTTGGATTAAAATATAGTAACCAGCCTACGTGCCCCGTAGTCAAGGGCATAGGGGGGTCTACTAAGGACATCCAAGGGTCCGTAAAAATTAAATTTGAATCACGTTTTAGCTCGAATGTTTCATTCGAAATAAACTCGCTGGTTGTAGATAAAGTAACGGAGCAACTTCCTACTGTTTCTGTAGATACCTCGTTGTTAGCTAACTTTGATAGTTTGCCGTTAGCCGATGATACTTACGCCGTTCCAGGAGCCGTCGATATTTTGATTGGCGCTTCGATTTTCCCGCACCTCCTGCTGCCACGTAAGGTTCAAGGTCATTCGGCGAACCCCGCACCGCACGCTTTGGAAACTGTTCTCGGTTTTGTTATAGTTGGATCCGCACCCGCTCTTATAAATAGTTACTCGACCGTATCATACTGCTGCGCCGTCGAGCCGCCACTGGACTCCACCGTCCGCCGCTTTTGGGAAATTGAAGAAGTAAATGTTCCGCTGGTTATGAGTCCTGATGATAAGACCGCTGAGGATATTTATTGTAGCACGACCACCCGCGATGAAAGTGGTCGTTATATTGTTGCACTCCCGTTTAAGGGTGATACCTTTTCGCTTGGTGATTCGCGCCTAATGGCCGAAAAACGCTTTTTTTGTTTAGAACGTAAGATGATGGCATCTCCGAAGTTGAAAAAGGCCTACGACGATGTCGTGAATGAATATGTAGATAAGGGTATCATCTCACCTGCTCCCGCTGTACTTGATGAGACGCAAAATGGTCCCTCTTATGTCATCCCGCATCATGGTGTCATTAGGGAGGATAAACTCACCACAAAATTGCGTGTTGTTCTGGATGGCAGTGCTAAGACTAGTACTTCTGTTTCTCTAAACGACATCTTGTATTGTGGTAAAAATCTTCAAGGTAACTTGTTTGATATTATCGTCAATTTTCGTTTATTTATTGTAGCGCTATCTGCAGACATTAGACAAATGTTTCTTTGTATTGGCATTCGGGAATCGGATCGTAGATTCCAAAGATTTTTATATAGGTTTTCCCCACACGAACCATTAAAGGTTTACCAGTTTAACCGCGTTTGTTTCGGACTTAAGTCAAGTCCGTTTCACGCGCTTCGCACTGTGAAGCAGTTAGTTCTTGATGAGGGTGATTCCTACCCCAAGGCAAAAGCTACCATCAATACTGGTCTGTATATGGATGACTTTGCTTATAGTGTAGATAGCGAGCCTGAAGCCATCGAAACAGCTACTCAAGTGATAAGCCTAATGAAGACTGGGCAATTTGACCTTGTTAAGTGGACGAGCAACTCTCAACGTGTTTTGGACTGGATTCCGCCATCGCATCGTCTATCGACGGTTAAGGATTTTGATGTCAATGATACACATAAGATTCTCGGCTTGAGCTGGTCTCCCACATCCGATACATTCAGTCTCAAAATTAGCTCGACCCCGCCAACTTGTACCAAACGCACCATATTGTCTTGTGTCGCTCGCATATGGGACATTATGGGTTTTGTAGCACCTGTAGTGTTATACGCAAAGCTTCTTATTAAAGAGCTTTGGCTTTCTCAGTGTGACTGGGATGACATCGCACCGGACAACGTGGCCAGATTATGGGCTCGCTTCAGGGAAGAGCTTCCTATGCTCGAACATATAGAAATCCCACGTCATGTAGGTATCTCTCGAGATAGTGTAGTCACAATAGTGGGGTTCGCAGATGCTAGTGAGAAGGCTTATGGAGGAGTGGTGTATTTTCACGTTTGCAATGGCGACAATATTACAGTTAGCCTTATTAGTGCGAAATCTAAGGTCTCCCTCGAAAGGTCGTCTCTCTCGCGCGCCTTGAGCTTTGCGCTTTACTACTATTGA

Protein

MPPKSNKSENDLKLLYAKRDMIYSRVQTICDNALKISDLAIRDSFLCSIENIDDLRADFESIVHNINALQLELDPDYAVSYSVMSSFDDLYCRIKRVAKSLGKIPSAGYSQTEPKFTRDRPRLPPIHIPEFNGDIRNWGLFIDSFENTVNQNDHLTDHEKLHYLVEKLTGKARAACAGITFSAENYSLILNTLKAKYEDKRLIATAYLDQLFELKPILSCTEQNLEKFLDIFASSVRAIRNLNVNDLSDFLFLYIGLKKLDFETVRLFETNQGTKGIELPKFNELESFLRNHIRILQRTTRPHEVPKRQPERHLETSSRPLRTTHSYVNTAALPASVPAKSTCFLCKSYHTQLYQCAEFLKLSPKNRYDFVRTNNLCLNCLSDKHRVGVCNSSHSCRKCSLKHHTLLHFDKNNNIVANRTTSAGNQPMYGNSSLAVSSSEHSHGRTHAGGTARCTTHLARPTYSPALPAAAVAAARTDSSAAINSDGNTNDVTLCSLSSARLPTTVLLATARVVMVDTYGKPHLVRALLDSASQSNFITRECCQRLGLKYSNQPTCPVVKGIGGSTKDIQGSVKIKFESRFSSNVSFEINSLVVDKVTEQLPTVSVDTSLLANFDSLPLADDTYAVPGAVDILIGASIFPHLLLPRKVQGHSANPAPHALETVLGFVIVGSAPALINSYSTVSYCCAVEPPLDSTVRRFWEIEEVNVPLVMSPDDKTAEDIYCSTTTRDESGRYIVALPFKGDTFSLGDSRLMAEKRFFCLERKMMASPKLKKAYDDVVNEYVDKGIISPAPAVLDETQNGPSYVIPHHGVIREDKLTTKLRVVLDGSAKTSTSVSLNDILYCGKNLQGNLFDIIVNFRLFIVALSADIRQMFLCIGIRESDRRFQRFLYRFSPHEPLKVYQFNRVCFGLKSSPFHALRTVKQLVLDEGDSYPKAKATINTGLYMDDFAYSVDSEPEAIETATQVISLMKTGQFDLVKWTSNSQRVLDWIPPSHRLSTVKDFDVNDTHKILGLSWSPTSDTFSLKISSTPPTCTKRTILSCVARIWDIMGFVAPVVLYAKLLIKELWLSQCDWDDIAPDNVARLWARFREELPMLEHIEIPRHVGISRDSVVTIVGFADASEKAYGGVVYFHVCNGDNITVSLISAKSKVSLERSSLSRALSFALYYY

Uniprot

A0A3Q0JJJ7   A0A1S3DJJ0   A0A1S3DJ34   A0A1S3DJC0   A0A1Y1LIC8   A0A3Q0JFQ3   + More
A0A3Q0JCL2   A0A1Y1LM33   A0A3Q0J7N1   A0A3Q0JBZ9   A0A3Q0J7K9   A0A3Q0J730   A0A1S3D744   A0A0J7KDN6   A0A1B6KIX6   X1XU04   J9JUK4   J9M7R2   A0A1B6MT91   X1WZF3   J9JL40   A0A0J7K7U0   X1WYQ7   A0A2S2NZ22   A0A0J7N890   A0A146KRI6   A0A1Y1LIG5   A0A1B6LLT3   A0A0A9WW84   A0A2S2P1X6   A0A1Y1KMX0   X1XU26   A0A2S2R2J0   A0A1W7R6A8   A0A1W7R6S6   A0A0A9ZHU0   A0A2S2QTX5   J9LPA9   A0A1U8N859   A0A087T9T6   A0A0J7N465   A0A2S2NHU0   X1X096   J9JLG6   J9JVZ7   A0A2H1X238   A0A1W7R6I7   A0A2S2PNZ4   A0A0N0PAG9   A0A226E780   A0A1W7R6N3   A0A226EPI5   A0A0A9WWW3   V9GZW9   J9LHB7   A0A2M4CW28   W8C1U1   A0A2M4CSC7   A0A226D417   A0A0A9X3X8  

Pubmed

28004739    26823975    25401762    25893780    26354079    24495485    + More

EMBL

GEZM01054789    JAV73399.1    GEZM01054766    GEZM01054765    JAV73410.1    LBMM01009202    + More
KMQ88311.1    GEBQ01028569    JAT11408.1    ABLF02028417    ABLF02042407    ABLF02039606    ABLF02005251    ABLF02055296    GEBQ01000825    JAT39152.1    ABLF02041614    ABLF02018732    ABLF02018737    LBMM01012238    KMQ86334.1    ABLF02041670    GGMR01009860    MBY22479.1    LBMM01008464    KMQ88855.1    GDHC01019528    JAP99100.1    JAV73413.1    GEBQ01015458    JAT24519.1    GBHO01031928    GBHO01031926    JAG11676.1    JAG11678.1    GGMR01010723    MBY23342.1    GEZM01085145    GEZM01085143    JAV60187.1    ABLF02001506    ABLF02008029    ABLF02035899    ABLF02037719    ABLF02046327    ABLF02064627    GGMS01014951    MBY84154.1    GEHC01000946    JAV46699.1    GEHC01000870    JAV46775.1    GBHO01000061    JAG43543.1    GGMS01011369    MBY80572.1    ABLF02035780    KK114194    KFM61875.1    LBMM01010417    KMQ87475.1    GGMR01003717    MBY16336.1    ABLF02008032    ABLF02035293    ABLF02060940    ABLF02030698    ABLF02030705    ABLF02030709    ABLF02015138    ODYU01012875    SOQ59395.1    GEHC01000869    JAV46776.1    GGMR01018506    MBY31125.1    KQ458473    KPJ05885.1    LNIX01000005    OXA53452.1    GEHC01000865    JAV46780.1    LNIX01000002    OXA59522.1    GBHO01034255    GBHO01034254    JAG09349.1    JAG09350.1    U23420    AAB03640.1    ABLF02022040    ABLF02056888    GGFL01005358    MBW69536.1    GAMC01006864    JAB99691.1    GGFL01004049    MBW68227.1    LNIX01000036    OXA39969.1    GBHO01030122    GBHO01030121    GBHO01030120    GBHO01030116    JAG13482.1    JAG13483.1    JAG13484.1    JAG13488.1   

Proteomes

UP000079169    UP000036403    UP000007819    UP000189702    UP000054359    UP000053268    + More
UP000198287   

Pfam

PF17921   Integrase_H2C2        + More
PF05585   DUF1758
PF03564   DUF1759
PF18701   DUF5641
PF00665   rve
PF05380   Peptidase_A17
PF00078   RVT_1
PF17919   RT_RNaseH_2
PF17917   RT_RNaseH

Interpro

IPR008042   Retrotrans_Pao        + More
IPR012337   RNaseH-like_sf       
IPR001584   Integrase_cat-core       
IPR005312   DUF1759       
IPR041588   Integrase_H2C2       
IPR008737   Peptidase_asp_put       
IPR040676   DUF5641       
IPR000477   RT_dom       
IPR036397   RNaseH_sf       
IPR021109   Peptidase_aspartic_dom_sf       
IPR001969   Aspartic_peptidase_AS       
IPR036875   Znf_CCHC_sf       
IPR001878   Znf_CCHC       
IPR041373   RT_RNaseH       
IPR041577   RT_RNaseH_2       
IPR001995   Peptidase_A2_cat       
IPR013087   Znf_C2H2_type       

SUPFAM

SSF53098   SSF53098        + More
SSF57756   SSF57756       
SSF50630   SSF50630       

Gene 3D

3.30.420.10     2.40.70.10    

ProteinModelPortal

A0A3Q0JJJ7   A0A1S3DJJ0   A0A1S3DJ34   A0A1S3DJC0   A0A1Y1LIC8   A0A3Q0JFQ3   + More
A0A3Q0JCL2   A0A1Y1LM33   A0A3Q0J7N1   A0A3Q0JBZ9   A0A3Q0J7K9   A0A3Q0J730   A0A1S3D744   A0A0J7KDN6   A0A1B6KIX6   X1XU04   J9JUK4   J9M7R2   A0A1B6MT91   X1WZF3   J9JL40   A0A0J7K7U0   X1WYQ7   A0A2S2NZ22   A0A0J7N890   A0A146KRI6   A0A1Y1LIG5   A0A1B6LLT3   A0A0A9WW84   A0A2S2P1X6   A0A1Y1KMX0   X1XU26   A0A2S2R2J0   A0A1W7R6A8   A0A1W7R6S6   A0A0A9ZHU0   A0A2S2QTX5   J9LPA9   A0A1U8N859   A0A087T9T6   A0A0J7N465   A0A2S2NHU0   X1X096   J9JLG6   J9JVZ7   A0A2H1X238   A0A1W7R6I7   A0A2S2PNZ4   A0A0N0PAG9   A0A226E780   A0A1W7R6N3   A0A226EPI5   A0A0A9WWW3   V9GZW9   J9LHB7   A0A2M4CW28   W8C1U1   A0A2M4CSC7   A0A226D417   A0A0A9X3X8  

KEGG

105842651    no KO assigned | (RefSeq) uncharacterized LOC105842651

GO

GO:0003676   GO:0015074   GO:0016021   GO:0004190   GO:0008270  

Length:

1168

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.47914

Exp number, first 60 AAs:

0.0004

Total prob of N-in:

0.00014

outside

1  -  1168

 

 

Pi

0

Theta

0

Tajima's D

0

CLR

19.921586

CSRT

0

Interpretation

Uncertain