SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03671  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA002222
Annotation
glutathione_S-transferase_delta_2_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.264 Extracellular   Reliability : 1.004
 

Sequence

CDS
ATGACCATCGACCTGTACTACGTTCCCGGCTCTGCGCCCTGCAGGGCTGTACTGCTGACAGCGAAGGCGCTCAACTTAAACCTGAACCTCAAACTGGTAGACCTACACCACGGGGAACAGCTCAAACCAGAATATTTGAAGTTGAACCCTCAACACACGGTCCCGACCCTAGTCGACGATGGTCTTTCAATCTGGGAGTCCCGCGCCATCATCACCTACTTGGTGAACAAGTACGCTAAGGGCAGCAGTCTGTACCCCGAAGACCCCAAAGCTCGTGCCCTAGTTGACCAACGATTGTATTTTGACATCGGAACTTTGTACCAGAGATTCAGTGATTATTTCTATCCCCAAGTATTCGCCGGTGCCCCAGCCGACAAGGCCAAGAACGAGAAGGTCCAGGAAGCCCTGCAGCTGCTGGACAAGTTCCTCGAAGGTCAGAAGTACGTGGCAGGACCGAACCTCACCGTCGCCGACCTGAGTCTCATCGCCAGTGTCTCCAGCCTGGAAGCCTCTGACATTGACTTCAAGAAATACGCCAACGTTAAGAGATGGTACGAGACGGTCAAGAGTACAGCTCCTGGATACCAGGAGGCCAACGAGAAAGGACTGGAGGCATTCAAGGGACTTGTCAACAGCATGCTTAAAAAGTGA
Protein
MTIDLYYVPGSAPCRAVLLTAKALNLNLNLKLVDLHHGEQLKPEYLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKYAKGSSLYPEDPKARALVDQRLYFDIGTLYQRFSDYFYPQVFAGAPADKAKNEKVQEALQLLDKFLEGQKYVAGPNLTVADLSLIASVSSLEASDIDFKKYANVKRWYETVKSTAPGYQEANEKGLEAFKGLVNSMLKK

Summary

Similarity
Belongs to the GST superfamily.
EMBL
BABH01038371    BABH01038372    BABH01038373    AB176691    BAD60789.1    AF336288    + More
AAK64362.1    EU541490    ACB36909.1    MF370558    AWA45966.1    NWSH01001884    PCG69798.1    EU887533    FJ360741    ACG69436.1    ACJ23087.1    GBRD01002382    JAG63439.1    AGBW02014704    OWR41162.1    MH177579    AYM01151.1    KF482973    AIH07597.1    ODYU01008429    SOQ52028.1    GCVX01000110    JAI18120.1    EF370473    ABQ53631.1    GAIX01003244    JAA89316.1    KF929201    AHW45899.1    AB541016    BAJ10978.1    KP938858    AKS40339.1    KQ459011    KPJ04373.1    RSAL01000033    RVE51447.1    KX229708    APW77569.1    DQ234273    ABB29466.1    KQ460500    KPJ14261.1    MG879005    AWX68885.1    EF207961    ABS57439.1    KM099179    AIL29309.1    BT128528    AEE63485.1    APGK01025511    KB740594    ENN80137.1    MF034816    AVT42182.1    KB632350    ERL93230.1    KY780632    ATE81124.1    GQ149104    ADD17089.1    KC966933    AHV85207.1    KX255831    ANS53388.1    EF033109    ABK40535.1    MG879006    AWX68886.1    KM433686    AIZ46898.1    FJ517557    FJ517558    ACL51929.1    PCG69796.1    KM433687    AIZ46899.1    KF929202    AHW45900.1    AY829757    AAV91371.1    KP938860    AKS40341.1    AK401889    BAM18511.1    KPJ04368.1    NEVH01013552    PNF28777.1    KU522308    APX61027.1    JQ686954    AFK49803.1    GANO01001603    JAB58268.1    JF793681    AEF98444.1    KQ971338    KYB27875.1    KC569744    AGO46413.1    KJ868730    AIL23531.1    DQ662543    ABG56084.1    GALX01001143    JAB67323.1    KP938859    AKS40340.1    KK853571    KDR06628.1    BABH01038374    BABH01038375    DQ355374    ABC79690.1    AM778448    CAO85744.1    KQ435040    KZC14171.1    FJ855498    AEV23880.1    EU266076    ABX57814.1    RVE51446.1    KR028425    AML23851.1    JN989966    AFM78644.1    MF503496    AVX32554.1    KY549656    AUO28661.1    KX609434    ARN17841.1    KF365938    AGY31900.1    KX018744    APC23398.1    GCVX01000119    JAI18111.1    CCAG010001985    GL768221    EFZ11753.1    EU079405    ABW76219.1    EU079381    EU079385    EU079387    ABW76195.1    ABW76199.1    ABW76201.1    CH940650    EDW67857.1    FJ855485    FJ855486    KY661296    AEV23867.1    AEV23868.1    AVA17383.1    KF061041    AGV08610.1    EZ424309    ADD20585.1    KR133402    AKM70872.1    KF365939    AGY31901.1    KC609530    AGL93467.1    KPJ14263.1    KF365931    AGY31893.1    JXJN01007685    EU079404    EU079409    EU079412    EU079414    EU079415    EU079417    EU079419    EU079423    EU079424    EU079435    EU079438    ABW76218.1    ABW76223.1    ABW76226.1    ABW76228.1    ABW76229.1    ABW76231.1    ABW76233.1    ABW76237.1    ABW76238.1    ABW76249.1    ABW76252.1    EU079448    EU079453    EU079456    ABW76262.1    ABW76267.1    ABW76270.1    EU079383    EU079393    EU079395    EU079396    EU079397    EU079398    EU079399    EU079400    EU079401    EU079402    CH933806    ABW76197.1    ABW76207.1    ABW76209.1    ABW76210.1    ABW76211.1    ABW76212.1    ABW76213.1    ABW76214.1    ABW76215.1    ABW76216.1    EDW14667.1    EU079450    EU079451    EU079452    EU079454    EU079455    EU079457    EU079458    EU079459    EU079460    EU079468    EU079470    ABW76264.1    ABW76265.1    ABW76266.1    ABW76268.1    ABW76269.1    ABW76271.1    ABW76272.1    ABW76273.1    ABW76274.1    ABW76282.1    ABW76284.1    EU079380    EU079382    EU079384    EU079386    EU079388    EU079389    EU079390    EU079391    EU079392    EU079394    ABW76194.1    ABW76196.1    ABW76198.1    ABW76200.1    ABW76202.1    ABW76203.1    ABW76204.1    ABW76205.1    ABW76206.1    ABW76208.1    AJ843575    CAH58743.1    KF365933    AGY31895.1    GEDC01004739    JAS32559.1    KC609534    AGL93471.1    CH902617    EDV42354.1    KF365932    AGY31894.1   
Pfam
PF14497   GST_C_3        + More
PF13417   GST_N_3
PF00043   GST_C
PF02798   GST_N
Interpro
IPR010987   Glutathione-S-Trfase_C-like        + More
IPR004045   Glutathione_S-Trfase_N       
IPR004046   GST_C       
IPR036249   Thioredoxin-like_sf       
IPR036282   Glutathione-S-Trfase_C_sf       
IPR040079   Glutathione_S-Trfase       
SUPFAM
SSF52833   SSF52833        + More
SSF47616   SSF47616       
PDB
3VK9     E-value=5.84538e-105,     Score=970

Ontologies

Topology

Length:
216
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0493
Exp number, first 60 AAs:
0.02202
Total prob of N-in:
0.05296
outside
1  -  216
 
 

Population Genetic Test Statistics

Pi
20.067811
Theta
26.559021
Tajima's D
-0.680273
CLR
1.126954
CSRT
0.2026398680066
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
Peptides ×
Source Sequence Identity Evalue
31223520 LNPQHTVPTLVDDGLSIWESR 100.00 1e-13
31223520 NEKVQEALQLLDKFLEGQK 100.00 4e-10
28556443 LNPQHTVPTLVDDGLSIWESR 100.00 4e-10
28556443 LNPQHTVPTLVDDGLSIWESR 100.00 4e-10
28556443 GLVNSMLK 100.00 4e-10
28556443 GGTGSVAQYSR 100.00 4e-10
31223520 STAPGYQEANEKGLEAFK 100.00 5e-07
31223520 FSDYFYPQVFAGAPADKAK 100.00 4e-06
31223520 FSDYFYPQVFAGAPADK 100.00 4e-06
31223520 LVDLHHGEQLKPEYLK 100.00 8e-06
26822097 GIVNSMIK 100.00 8e-06
26280517 FSDFVEETAIHK 100.00 8e-06
25044914 FSDMFTGR 100.00 8e-06
24402669 FSATGDIGSANVK 100.00 8e-06
27102218 STAPGYQEANEK 100.00 8e-06
28467696 FSDFIGIHEK 100.00 8e-06
31223520 AIITYLVNKYAK 100.00 2e-04
31223520 TIDLYYVPGSAPCR 100.00 5e-04
31223520 VQEALQLLDKFLEGQK 100.00 0.018
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