SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03661
Pre Gene Modal
BGIBMGA002227
Annotation
olfactory_receptor_7_[Bombyx_mori]
Full name
Odorant receptor      
Location in the cell
PlasmaMembrane   Reliability : 4.795
 

Sequence

CDS
ATGACCTATATATTCTCTTTTTCCATTTTCGTCTGTGTGGTCACTTTTAACCTGAACCCGGTTTTCAACAATATCGGGTCGGGTGCATACAAGAATCCCCGACCAGACAACGTGACTTTGCAGCAATGCGTGTATTACGCACTCCCCTTTGACTACACGGGAGATTTCAAATGGTACATGCTGGTGGCCATCTTTAACGTACAGAAAACATTTTTCTGCACCTCACTGTTTATATTATTTGATTTATTACTGTCTATGATGATAATACACTTGTGGGGTCATATCCGGATCTTTATCCACAATTTGAACCACATACCGGCGCCTCGTAACTCCTTGGAGTACACAAGAGAAGAGAGACAAGAAGTGGATAATACGCTGAAGAAGTGCATTCAACACCACACTTTAATAATAGGATTTGTTCGCATAATGTCTGAGACGTACGGTCTGGCGGTCCTCATCTATTACGCTTTCCAGCAAGTGGTTGGATGCTTGTTGCTGTTGCAATGTTCACGACTGGATTTGAAAACTATCACGCGATTTGGATTTTTGACTACTATGGTAAATCAACAATTAATTCAAATATCGGTCATATTTGAGCTTCTAGGGTATATGAATGATAAGCTCCAAGATGCAGTGTACTGCGTGCCGTGGGAGTACATGGACACAAGTCACAGGAAGATGGTGTACATGATGTTCAGACAGTCGCAGATACCATTGCAGTTGAAGGCTATGAACATGTTGAGCATAGGCGTCAAAACTATGGCCTCGATATTGAAGACGTCTGTAACGTACTACCTTATGTTGAAAACCATTACGGCCAACGAAGCTTAA
Protein
MTYIFSFSIFVCVVTFNLNPVFNNIGSGAYKNPRPDNVTLQQCVYYALPFDYTGDFKWYMLVAIFNVQKTFFCTSLFILFDLLLSMMIIHLWGHIRIFIHNLNHIPAPRNSLEYTREERQEVDNTLKKCIQHHTLIIGFVRIMSETYGLAVLIYYAFQQVVGCLLLLQCSRLDLKTITRFGFLTTMVNQQLIQISVIFELLGYMNDKLQDAVYCVPWEYMDTSHRKMVYMMFRQSQIPLQLKAMNMLSIGVKTMASILKTSVTYYLMLKTITANEA

Summary

Similarity
Belongs to the insect chemoreceptor superfamily. Heteromeric odorant receptor channel (TC 1.A.69) family.
EMBL
AJ874109    CAI43913.1    AJ874108    CAI43912.1    AB186507    BAD89569.1    + More
FN556591    CBH19582.1    FN556592    CBH19583.1    AB472092    BAH66309.1    AB186506    BAD89568.1    KJ542667    AJD81551.1    AB263205    BAG71423.2    BK005919    DAA05969.1    GQ165721    ACS45307.1    KF768667    AIG51861.1    GQ165718    ACS45304.1    KC299918    AGH58121.1    GENK01000051    JAV45862.1    AB186509    BAG12808.1    FJ393455    ACJ12370.1    AJ748328    CAG38114.1    KY660035    AUY55140.1    KC188668    AGI96750.1    EU979116    ACL81181.1    HM595405    LN885099    ADM32897.1    CUQ99388.1    KC960474    AGY14585.2    ODYU01000580    SOQ35608.1    KX084459    ARO76414.1    JN835269    AEY84942.2    AJ874106    CAI43910.1    AB059431    BAD69584.1    KC526967    AGS41443.1    GQ246496    ACT34880.1    AB101293    BAD69586.1    AB508337    BAI66648.1    AB508310    BAI66621.1    AB263206    BAG71424.1    JX173648    AFP54146.1    AB508331    BAI66642.1    AB508321    BAI66632.1    KJ830840    AIZ94620.1    AB597007    BAJ61935.1    LC002701    BAR43449.1    AB508298    BAI66609.1    JX173649    AFP54147.1    KJ542669    AJD81553.1    JX910532    AGG91649.1    AB508325    BAI66636.1    AB263116    BAG71420.1    AB594450    BAJ22890.1    AB263113    BAG71417.1    AB597005    BAJ61933.1    KC538876    AGK43824.1    KJ830839    AIZ94619.1    AB508304    BAI66615.1    KC188669    AGI96751.1    AB508316    BAI66627.1    KF768670    AIG51864.1    KX084452    ARO76407.1    KF856285    AHI44516.1    EU979117    ACL81182.1    KF768669    AIG51863.1    ODYU01006989    SOQ49333.1    KT588099    AOE48009.1    KF768660    AIG51854.1    MF431269    AXJ21642.1    KY283637    AST36296.1    AB467326    BAH57981.1    KX655954    AOG12903.1    EU818705    ACF32964.1    KM655531    AIT71981.1    AB467321    BAH57976.1    JN169140    AB596042    AFK30401.1    BAJ61929.1    KJ830838    AIZ94618.1    NWSH01000007    PCG80966.1    KM597195    AIT69872.1    AB467320    BAH57975.1    JN169138    AFK30399.1    AB467325    BAH57980.1    JX982525    AGK90000.1    GQ844880    ADB89182.1    JN169139    AFK30400.1    AB467323    BAH57978.1    AJ748331    CAG38117.1    KC960468    AGY14579.2    JX910525    AGG91642.1    AJ748330    CAG38116.1    AB467324    BAH57979.1    SOQ49331.1    JX982539    AGK90014.1    AJ748326    CAG38112.1    GQ165723    ACS45309.1    PCG80967.1    AB467327    BAH57982.1    AB467322    BAH57977.1    JX982530    AGK90005.1    AJ748329    CAG38115.1    KY660036    AUY55141.1    GENK01000052    JAV45861.1    KT588098    AOE48008.1    KY283587    AST36247.1    SOQ49330.1   
Pfam
PF02949   7tm_6
Interpro
IPR004117   7tm6_olfct_rcpt       

Ontologies

Topology

Subcellular location
Cell membrane  
SignalP
Position:   1 - 23,         Likelihood:  0.715081
 
 
Length:
276
Number of predicted TMHs:
3
Exp number of AAs in TMHs:
89.16363
Exp number, first 60 AAs:
22.78967
Total prob of N-in:
0.35563
POSSIBLE N-term signal
sequence
inside
1  -  6
TMhelix
7  -  29
outside
30  -  57
TMhelix
58  -  80
inside
81  -  134
TMhelix
135  -  157
outside
158  -  276
 
 

Population Genetic Test Statistics

Pi
15.802091
Theta
2.204841
Tajima's D
-1.239308
CLR
3.081537
CSRT
0.0922453877306135
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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