Gene

KWMTBOMO03660

Pre Gene Modal

BGIBMGA002227

Annotation

olfactory_receptor-4_[Bombyx_mori]

Location

Bomo_Chr6(-):15141400-15144669      View in EpiBrowser

Full name

Odorant receptor      

Location in the cell

PlasmaMembrane   Reliability : 4.79

CDS

ATGAAGATTCACACCGTTGTGCACAAGATATCACATAATATGACCTACATATTTTCTTTTTGCATTATCTTCGGTACAGTTACGTTTAACCTGACCCCGATTTTCAACAATATCGGGTCGGGTGCATACAAGAATCCTCGACCAGACAACGTGACCTTGCAGCAATGCGTGTATTACGCACTCCCCTTTGACTACACGGGAAATTTCAAGTGGTACTTGCTGGTGGCCATCTTTAACGTACAGAAAACATTTTTCTGCACCTCACTATTTATATTATTTGAATTATCACTGTCCTTGATGATAATATGCTTGTGGGGACATCTCCGGATCTTTATCCACAATTTGAACCACATACCGGCGCCTCGTAACTCCTTCGAGTACACAAAAGAAGAGAGACAAGAAGTGGATGATACGCTGAAGAAGTGCATTCAACACCACACTTTAATAATAGGATTTGTTCGCATAATGTCTGAGACGTACGGTCTGGCGGTCCTCATCTATTACGCTTTCCAGCAAGTGGTTGGATGCTTGTTGCTGTTGCAATGTTCACAAATGGAATTGAAAACTGTCACGCGATTTGGATTTTTGACACTGGTTCTAAATCAACAATTAATTCAAATATCGGTCATATTTGAGCTTTTAGGGTATATGGTAAGTTGCTTTTTTCCCTTTGGAGGTAGATGA

Protein

MKIHTVVHKISHNMTYIFSFCIIFGTVTFNLTPIFNNIGSGAYKNPRPDNVTLQQCVYYALPFDYTGNFKWYLLVAIFNVQKTFFCTSLFILFELSLSLMIICLWGHLRIFIHNLNHIPAPRNSFEYTKEERQEVDDTLKKCIQHHTLIIGFVRIMSETYGLAVLIYYAFQQVVGCLLLLQCSQMELKTVTRFGFLTLVLNQQLIQISVIFELLGYMVSCFFPFGGR

Similarity

Belongs to the insect chemoreceptor superfamily. Heteromeric odorant receptor channel (TC 1.A.69) family.

Uniprot

Q4W1W4   Q5FBD8   Q4W1W3   D3H5T3   C4B7U3   D3H5T2   + More
B1B1Q0   Q5FBD9   A7E3F4   B5MEK3   M4SS16   A0A1V1WBX9   A0A2L0NH48   U5KJQ7   A0A1B2G2L9   U5NG03   A0A1Y9TJH5   A0A2H1V437   D2KWT5   M9T6E0   T1NXB8   Q6A1K1   A0A0B4ZYC6   D2KWS9   D2KWR9   B5A7F2   B5MEK0   A0A1B3B716   A0A075TD52   A0A2A4KAF9   N0A395   C6K7B6   A0A2A4K9S9   A0A075T2W9   H6VN02   C6K7B9   B6VGV0   Q6A1J9   W5ZSF7   D2KWQ8   Q5WA61   A0A1V1WCF4   Q4W1W6   E7FL92   Q5WA53   R4JSE8   D2KWR4   E1ACG1   C7E3V8   Q6A1K0   A0A1B3B718   A0A075T6V4   A0A0C4UU70   U5NJ61   E2S043   A0A1B3B721   B5MEK4   D2KWQ2   A0A345W8A4   D2KWS3   U5KJI4   A0A2H1W8C8   R4JSE3   J7G4H5   D2KWP6   A0A2A4K9J7   J7G8K5   E7FL90   A0A2H1W8D7   A0A075T6W0   A0A0E4B3U7   M4NKX7   A0A0C4UUE4   A0A2L0NG62   Q8MMI0   U5KK32   U5KK33   M9T4N0   Q6A1J8   A0A097IYL9   Q6A1K3   A0A097ITT1   R4JLZ7   T1NXB6   A0A2H1W8J1   A0A0S1TPN2   B5MEJ4   A0A097IYM4   R4JUU3   A0A075T800   A0A2L0NGV3   A0A0V0J0Z9   A0A0S1TQY8   J7FT76   A0A0G2RLW4   J7FXC2   A0A0P1JE97   B9VH07   A0A1S5XXK1   C4MX27  

Pubmed

15869513    15692016    19427209    17257213    24130875    23894529    + More
25039606    20044000    21526121    15289611    25027790    23614018    15545611    24632377    20725598    12270037    25252791    26812239    27006164    22911835    23950722    19293399   

EMBL

AJ874108    CAI43912.1    AB186507    BAD89569.1    AJ874109    CAI43913.1    + More
FN556592    CBH19583.1    AB472092    BAH66309.1    FN556591    CBH19582.1    AB186509    BAG12808.1    AB186506    BAD89568.1    BK005919    DAA05969.1    AB263205    BAG71423.2    KC299918    AGH58121.1    GENK01000051    JAV45862.1    KY660035    AUY55140.1    KC526967    AGS41443.1    KU598894    ANZ03140.1    KC960474    AGY14585.2    KX084459    ARO76414.1    ODYU01000580    SOQ35608.1    AB508337    BAI66648.1    KC188668    AGI96750.1    EU979116    ACL81181.1    AJ748328    CAG38114.1    KJ542667    AJD81551.1    AB508331    BAI66642.1    AB508321    BAI66632.1    EU818705    ACF32964.1    AB263116    BAG71420.1    KT588099    AOE48009.1    KF768667    AIG51861.1    NWSH01000007    PCG80966.1    KC538876    AGK43824.1    GQ165718    ACS45304.1    PCG80967.1    KF768669    AIG51863.1    JN835269    AEY84942.2    GQ165721    ACS45307.1    FJ393455    ACJ12370.1    AJ748330    CAG38116.1    KF856285    AHI44516.1    AB508310    BAI66621.1    AB059431    BAD69584.1    GENK01000052    JAV45861.1    AJ874106    CAI43910.1    AB597007    BAJ61935.1    AB101293    BAD69586.1    JX982530    AGK90005.1    AB508316    BAI66627.1    HM595405    LN885099    ADM32897.1    CUQ99388.1    GQ246496    ACT34880.1    AJ748329    CAG38115.1    KT588098    AOE48008.1    KF768660    AIG51854.1    KJ830840    AIZ94620.1    KC960468    AGY14579.2    AB594450    BAJ22890.1    KT588100    AOE48010.1    AB263206    BAG71424.1    AB508304    BAI66615.1    MF431269    AXJ21642.1    AB508325    BAI66636.1    KC526973    AGS41449.1    ODYU01006989    SOQ49331.1    JX982525    AGK90000.1    JN701807    AFP66949.1    AB508298    BAI66609.1    PCG80965.1    JN701806    AFP66948.1    AB597005    BAJ61933.1    SOQ49330.1    KF768670    AIG51864.1    LC002701    BAR43449.1    JX910532    AGG91649.1    KJ830839    AIZ94619.1    KY660033    AUY55138.1    AJ487481    CAD31948.1    KC526965    AGS41441.1    KC526970    AGS41446.1    KC188669    AGI96751.1    AJ748331    CAG38117.1    KM655531    AIT71981.1    AJ748326    CAG38112.1    KM597195    AIT69872.1    JX982539    AGK90014.1    EU979117    ACL81182.1    SOQ49333.1    KR935700    ALM26192.1    AB263110    BAG71414.1    KM655555    AIT72005.1    JX982531    AGK90006.1    KF768703    AIG51897.1    KY660036    AUY55141.1    GDKB01000035    JAP38461.1    KR935711    ALM26203.1    JX173649    AFP54147.1    KJ577702    AJG42377.1    JX173648    AFP54146.1    LN885098    CUQ99387.1    FJ546086    ACM18059.1    KY399257    AQQ73488.1    EU791886    ACJ12927.2   

Proteomes

UP000218220   

PRIDE

Q4W1W4    Q5FBD8    Q4W1W3    C4B7U3    B1B1Q0    Q5FBD9    + More
A7E3F4    Q5WA61    Q4W1W6    Q5WA53    C7E3V8   

Pfam

PF02949   7tm_6

Interpro

IPR004117   7tm6_olfct_rcpt       

ProteinModelPortal

Q4W1W4   Q5FBD8   Q4W1W3   D3H5T3   C4B7U3   D3H5T2   + More
B1B1Q0   Q5FBD9   A7E3F4   B5MEK3   M4SS16   A0A1V1WBX9   A0A2L0NH48   U5KJQ7   A0A1B2G2L9   U5NG03   A0A1Y9TJH5   A0A2H1V437   D2KWT5   M9T6E0   T1NXB8   Q6A1K1   A0A0B4ZYC6   D2KWS9   D2KWR9   B5A7F2   B5MEK0   A0A1B3B716   A0A075TD52   A0A2A4KAF9   N0A395   C6K7B6   A0A2A4K9S9   A0A075T2W9   H6VN02   C6K7B9   B6VGV0   Q6A1J9   W5ZSF7   D2KWQ8   Q5WA61   A0A1V1WCF4   Q4W1W6   E7FL92   Q5WA53   R4JSE8   D2KWR4   E1ACG1   C7E3V8   Q6A1K0   A0A1B3B718   A0A075T6V4   A0A0C4UU70   U5NJ61   E2S043   A0A1B3B721   B5MEK4   D2KWQ2   A0A345W8A4   D2KWS3   U5KJI4   A0A2H1W8C8   R4JSE3   J7G4H5   D2KWP6   A0A2A4K9J7   J7G8K5   E7FL90   A0A2H1W8D7   A0A075T6W0   A0A0E4B3U7   M4NKX7   A0A0C4UUE4   A0A2L0NG62   Q8MMI0   U5KK32   U5KK33   M9T4N0   Q6A1J8   A0A097IYL9   Q6A1K3   A0A097ITT1   R4JLZ7   T1NXB6   A0A2H1W8J1   A0A0S1TPN2   B5MEJ4   A0A097IYM4   R4JUU3   A0A075T800   A0A2L0NGV3   A0A0V0J0Z9   A0A0S1TQY8   J7FT76   A0A0G2RLW4   J7FXC2   A0A0P1JE97   B9VH07   A0A1S5XXK1   C4MX27  

KEGG

692472    K22984 odorant receptor | (RefSeq) Or-5, BmOR-5, or-4; olfactory receptor 5

GO

GO:0005886   GO:0005549   GO:0004984   GO:0007165   GO:0016021   GO:0007608   GO:0016020   GO:0005515   GO:0051103   GO:0005524   GO:0008270   GO:0042555   GO:0048384  

PANTHER

PTHR21137  

Subcellular location

Cell membrane  

Length:

227

Number of predicted TMHs:

4

Exp number of AAs in TMHs:

96.79061

Exp number, first 60 AAs:

23.73639

Total prob of N-in:

0.80980

POSSIBLE N-term signal

sequence

inside

1  -  12

TMhelix

13  -  35

outside

36  -  70

TMhelix

71  -  93

inside

94  -  147

TMhelix

148  -  170

outside

171  -  203

TMhelix

204  -  226

inside

227  -  227

 

 

Pi

2.670156

Theta

20.505426

Tajima's D

-1.398808

CLR

1.962459

CSRT

0.0725463726813659

Interpretation

Uncertain