Gene

KWMTBOMO03653

Pre Gene Modal

BGIBMGA014550

Annotation

desaturase_[Bombyx_mori]

Location

Bomo_Chr6(-):14732889-14737188      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 2.532

CDS

ATGAAGCTAAAACAGAATTCAATATACAACTGGGTGAGGGATCACAGACTCCATCACAAGTTTGCTGACACCGATGCCGACCCTCACAACGTGAAACGAGGCTTCTTCTTCTCCCACATAGGATGGCTGATGGTGAAGAAGAACGAAAGTGTCCTTACGAAGGGAAAGCTGATTGACATGAGTGACATAGAAAGCGATTCTCATTTGATGTTTGAACATAAATACCACAATCAATTAACAATCCTATTCTGTTTTCTAATACCAACATTAATGAACATCTTCTTGATCGGGGAAGATTGGAAATGCGCTATTGCCTGGCAATGCTTCATACGGTATCTCTACGTGCTGCATTGTGAACTGACTGTTAACAGTTTGGCTCATATGTACGGCTATAAACCTTACAACGAAAACATTGAAGCATCAGAGAATATTCTAGTTTCGGTCCTGACGTACGGCGAGGGCTATCACAACTTTCATCATGTCTTCCCATTTGACTTTCGTGCAGCAGAAACTATGGATTTCTTCAGTCTATCCACAAAGATAATCAGAACATTCGAGAAGATTGGTTGGACGTATGACCTCAAGCAAGCCAGTCCAGAAATGATCGAGGCGGCTCGTAACAAGCTAGGGGGTGATGGGTCTAAAGCTAACAATTAA

Protein

MKLKQNSIYNWVRDHRLHHKFADTDADPHNVKRGFFFSHIGWLMVKKNESVLTKGKLIDMSDIESDSHLMFEHKYHNQLTILFCFLIPTLMNIFLIGEDWKCAIAWQCFIRYLYVLHCELTVNSLAHMYGYKPYNENIEASENILVSVLTYGEGYHNFHHVFPFDFRAAETMDFFSLSTKIIRTFEKIGWTYDLKQASPEMIEAARNKLGGDGSKANN

Cofactor

Fe cation

Similarity

Belongs to the fatty acid desaturase type 1 family.

Uniprot

G9BY58   H9JYD0   A0A2A4JV26   A0A2A4JW88   G9BY59   T1RU52   + More
A0A3S2NSR1   A0A2H1VHN0   A0A194REN0   A0A194RIH1   A0A194Q2W5   T1RU43   A0A2A4K356   A0A291P0E4   T1RTD4   A0A1L8D6H7   A0A212F8H4   E3TMU9   A0A1W4X6D0   A0A2H1X0N9   A0A1B6DCJ1   B3LZD2   A0A232EI48   A0A1B0B1J8   B4M6D6   D2A5U2   A0A3Q0IQ53   A0A1B0CEY1   A0A1A9XNV7   A0A0J7K2H2   B4NGT2   Q8MZX4   A0A1A9VPX3   A0A1W4VQC5   K7J1Y0   B4K9T3   A0A1B6MHV3   Q8N001   A0A1B6EKR5   A0A1A9WN17   A0A1B6H226   Q8MZY2   A0A1Q3F6G7   A0A1A9ZF92   A0A1B6IH88   D3TN52   A0A1B0GE34   B4R1J8   A0A0A9ZCN0   T1HR83   B4PLU0   Q9VA94   A0A1L8D6L2   A0A146KPE5   A0A1L8D6I7   T1IDC7   B4JEM7   B0X4F3   A0A0V0GDS0   A0A151JS66   B4GNP6   Q29C24   A0A069DSW7   A0A1B6IB78   A0A0P6IHM7   W8B9K3   E2C646   A0A1I8N2Y4   Q8MZW0   A0A3B0KVP4   A0A182PS55   T1PM50   A0A194R858   A0A067RHH4   A0A182TJZ6   A0A2J7Q0J6   A0A182T7Z9   A0A226DE17   A0A1L8D6C1   A0A2J7Q0J2   A0A1B6MMW0   A0A067QT59   A0A212EQ61   E0VE45   A0A3Q0JL17   A0A067QIN8   A0A2J7PNI7   A0A146L0C4   A0A195FTS5   E0VE42   Q7QDJ5   A0A182H3A8   A0A1Y1LF74   A0A182JFM4   A0A182Y4H9   A0A096XDB2   A0A067RJC1   A0A1S4F5C8   A0A2A4IXV6  

Pubmed

19121390    24500170    26354079    28986331    22118469    20691782    + More
17994087    28648823    18362917    19820115    12524345    20075255    20353571    25401762    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    26823975    15632085    26334808    24495485    20798317    25315136    24845553    20566863    12364791    14747013    17210077    26483478    28004739    25244985    24880119   

EMBL

HQ704865    AET36545.1    BABH01043271    BABH01043272    NWSH01000559    PCG75659.1    + More
PCG75660.1    HQ704866    AET36546.1    JX531674    AGO45859.1    RSAL01000244    RVE43603.1    ODYU01002605    SOQ40327.1    KQ460325    KPJ15745.1    KPJ15746.1    KQ459564    KPI99678.1    JX531659    AGO45844.1    NWSH01000211    PCG78358.1    MF687531    ATJ44457.1    JX531665    AGO45850.1    GEYN01000134    JAV01995.1    AGBW02009734    OWR50018.1    GU952764    ADO85597.1    ODYU01012535    SOQ58905.1    GEDC01030129    GEDC01013889    JAS07169.1    JAS23409.1    CH902617    EDV44111.1    NNAY01004348    OXU18023.1    JXJN01007190    CH940652    EDW59212.1    KQ971345    EFA05022.2    AJWK01009460    AJWK01009461    LBMM01016179    KMQ84512.1    CH964272    EDW84429.1    AF482926    AAM28501.1    CH933806    EDW14558.1    GEBQ01004508    JAT35469.1    AF482899    AAM33369.1    GECZ01031245    JAS38524.1    GECZ01001025    JAS68744.1    AF482918    AAM28493.1    GFDL01011942    JAV23103.1    GECU01021427    GECU01014371    GECU01009143    JAS86279.1    JAS93335.1    JAS98563.1    EZ422854    ADD19130.1    CCAG010012086    CM000364    EDX14986.1    GBHO01001405    GBHO01001404    JAG42199.1    JAG42200.1    ACPB03003193    CM000160    EDW99077.1    AE014297    AY047565    AAF57020.1    AAK77297.1    GEYN01000122    JAV02007.1    GDHC01021497    JAP97131.1    GEYN01000124    JAV02005.1    ACPB03002937    CH916369    EDV93158.1    DS232338    EDS40306.1    GECL01000276    JAP05848.1    KQ978543    KYN30213.1    CH479186    EDW39372.1    CM000070    EAL26822.2    GBGD01001849    JAC87040.1    GECU01025859    GECU01023512    JAS81847.1    JAS84194.1    GDIQ01004277    JAN90460.1    GAMC01011209    GAMC01011208    JAB95347.1    GL452916    EFN76589.1    AF482940    AAM28515.1    OUUW01000041    SPP89936.1    KA649803    KA649804    AFP64433.1    KQ460845    KPJ12051.1    KK852680    KDR18593.1    NEVH01019966    PNF22107.1    LNIX01000022    OXA43413.1    GEYN01000127    JAV02002.1    PNF22108.1    GEBQ01002690    JAT37287.1    KK853306    KDR08705.1    AGBW02013325    OWR43604.1    DS235088    EEB11651.1    KDR08706.1    NEVH01023953    PNF17902.1    GDHC01018259    JAQ00370.1    KQ981276    KYN43687.1    EEB11648.1    AAAB01008851    EAA07365.5    JXUM01107306    JXUM01107307    JXUM01107308    JXUM01107309    KQ565130    KXJ71303.1    GEZM01060604    JAV70980.1    KF576672    AHH30813.1    KK852437    KDR23917.1    NWSH01004663    PCG64797.1   

Proteomes

UP000005204    UP000218220    UP000283053    UP000053240    UP000053268    UP000007151    + More
UP000192223    UP000007801    UP000215335    UP000092460    UP000008792    UP000007266    UP000079169    UP000092461    UP000092443    UP000036403    UP000007798    UP000078200    UP000192221    UP000002358    UP000009192    UP000091820    UP000092445    UP000092444    UP000000304    UP000015103    UP000002282    UP000000803    UP000001070    UP000002320    UP000078492    UP000008744    UP000001819    UP000008237    UP000095301    UP000268350    UP000075885    UP000027135    UP000075902    UP000235965    UP000075901    UP000198287    UP000009046    UP000078541    UP000007062    UP000069940    UP000249989    UP000075880    UP000076408   

PRIDE

G9BY58    H9JYD0    G9BY59    T1RU52    Q9VA94   

Pfam

PF00487   FA_desaturase

Interpro

IPR015876   Acyl-CoA_DS        + More
IPR005804   FA_desaturase_dom       
IPR001522   FADS-1_CS       
IPR009160   Acyl-CoA_deSatase_haem/ster-bd       

CDD

cd03505  Delta9-FADS-like

ProteinModelPortal

G9BY58   H9JYD0   A0A2A4JV26   A0A2A4JW88   G9BY59   T1RU52   + More
A0A3S2NSR1   A0A2H1VHN0   A0A194REN0   A0A194RIH1   A0A194Q2W5   T1RU43   A0A2A4K356   A0A291P0E4   T1RTD4   A0A1L8D6H7   A0A212F8H4   E3TMU9   A0A1W4X6D0   A0A2H1X0N9   A0A1B6DCJ1   B3LZD2   A0A232EI48   A0A1B0B1J8   B4M6D6   D2A5U2   A0A3Q0IQ53   A0A1B0CEY1   A0A1A9XNV7   A0A0J7K2H2   B4NGT2   Q8MZX4   A0A1A9VPX3   A0A1W4VQC5   K7J1Y0   B4K9T3   A0A1B6MHV3   Q8N001   A0A1B6EKR5   A0A1A9WN17   A0A1B6H226   Q8MZY2   A0A1Q3F6G7   A0A1A9ZF92   A0A1B6IH88   D3TN52   A0A1B0GE34   B4R1J8   A0A0A9ZCN0   T1HR83   B4PLU0   Q9VA94   A0A1L8D6L2   A0A146KPE5   A0A1L8D6I7   T1IDC7   B4JEM7   B0X4F3   A0A0V0GDS0   A0A151JS66   B4GNP6   Q29C24   A0A069DSW7   A0A1B6IB78   A0A0P6IHM7   W8B9K3   E2C646   A0A1I8N2Y4   Q8MZW0   A0A3B0KVP4   A0A182PS55   T1PM50   A0A194R858   A0A067RHH4   A0A182TJZ6   A0A2J7Q0J6   A0A182T7Z9   A0A226DE17   A0A1L8D6C1   A0A2J7Q0J2   A0A1B6MMW0   A0A067QT59   A0A212EQ61   E0VE45   A0A3Q0JL17   A0A067QIN8   A0A2J7PNI7   A0A146L0C4   A0A195FTS5   E0VE42   Q7QDJ5   A0A182H3A8   A0A1Y1LF74   A0A182JFM4   A0A182Y4H9   A0A096XDB2   A0A067RJC1   A0A1S4F5C8   A0A2A4IXV6  

PDB

4YMK     E-value=3.59961e-54,     Score=532

KEGG

101743818    K00507 stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] | (RefSeq) acyl-CoA Delta(11) des

PATHWAY

01040    Biosynthesis of unsaturated fatty acids - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)
01212    Fatty acid metabolism - Bombyx mori (domestic silkworm)

GO

GO:0016717   GO:0016021   GO:0006633   GO:0016491   GO:0006636   GO:0005506   GO:0005789   GO:0004768   GO:0006629   GO:0007165   GO:0016020   GO:0005515   GO:0051103   GO:0005524   GO:0008270   GO:0042555   GO:0048384   GO:0055114  

PANTHER

PTHR11351  

Length:

218

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

24.64718

Exp number, first 60 AAs:

0.04394

Total prob of N-in:

0.52398

inside

1  -  78

TMhelix

79  -  96

outside

97  -  218

 

 

Pi

11.054103

Theta

6.505451

Tajima's D

-1.821199

CLR

0.26609

CSRT

0.023598820058997

Interpretation

Uncertain