Gene

KWMTBOMO03651

Pre Gene Modal

BGIBMGA014550

Annotation

PREDICTED:_acyl-CoA_Delta(11)_desaturase-like_[Bombyx_mori]

Location

Bomo_Chr6(-):14712300-14718128      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 2.318

CDS

ATGACTGTTTTCTGTGCATTAGGTATTACTTGCGGTGCGCACAGGTTGTGGACGCATCGATCGTACAAAGTTAAAGCACCCGTGAAGTTTCTCTTGATGGCTTGCTTCTGCAGCACTGGCCAGAATTCAATATACGACTGGGTGAGGGATCACAGACTCCATCACAAGTTCGCCGACACCGATGCCGACCCTCACAACGTGAACCGAGGCTTCTTCTTCTCCCACATAGGATGGTTGATGATGAAGAAGAACGAAAGCGTCCTAACGAAAGGAAAGCTGATTGACATGAGTGACATAGAGAGCGATTCCCATTTGATGTTTCAACATAAATACCACAATCAATTAAAAATCCTATTCTGTTTTCTAATACCAACATTAATGAACATCTTCTTGATCGGGGAAGATTGGAAGTGCGCTGTTGCCTGGCAATGCTTCATACGGTATCTCTACGTGCTGCATTGTGAACTGACTGTTAACAGTTTGGCTCATATGTACGGCTATAAACCTTACAACGTAAACATTGAAGCATCAGAGAATATTCTAGTTTCGGTCCTGACATACGGCGAGGGCTATCACAACTTTCATCATGTCTTCCCATTCGACTTTCGTGCAGCAGAAACTATGGATTTCTTCAGTCTATCCACAAAGATAATCAGGACATTCGAGAAGATTGGTTGGACGTATGACCTCAAGCAAGCCAGTCCAGAAATGATCGAGGCGGCTCGTGACAAGCTAGGGAGTGATGGGTCTAAAGCTCACAATTAA

Protein

MTVFCALGITCGAHRLWTHRSYKVKAPVKFLLMACFCSTGQNSIYDWVRDHRLHHKFADTDADPHNVNRGFFFSHIGWLMMKKNESVLTKGKLIDMSDIESDSHLMFQHKYHNQLKILFCFLIPTLMNIFLIGEDWKCAVAWQCFIRYLYVLHCELTVNSLAHMYGYKPYNVNIEASENILVSVLTYGEGYHNFHHVFPFDFRAAETMDFFSLSTKIIRTFEKIGWTYDLKQASPEMIEAARDKLGSDGSKAHN

Cofactor

Fe cation

Similarity

Belongs to the fatty acid desaturase type 1 family.

Uniprot

H9JYD0   G9BY58   A0A3S2NSR1   T1RU52   G9BY59   A0A194REN0   + More
A0A194RIH1   A0A194Q2W5   A0A2H1VHN0   A0A2A4JV26   A0A291P0E4   A0A1L8D6H7   T1RU43   A0A2A4K356   A0A212F8H4   A0A2A4JW88   T1RTD4   A0A0J7K2H2   A0A1A9XNV7   A0A1A9VPX3   B4NGT2   B3LZD2   A0A1A9ZF92   A0A1B0CEY1   A0A0P6IHM7   A0A2H1X0N9   A0A1B0GE34   D3TN52   A0A1A9WN17   B4M6D6   A0A1W4VQC5   A0A1B6DCJ1   E3TMU9   A0A1B6EKR5   Q8MZX4   A0A1B6IH88   B4K9T3   B4R1J8   B4PLU0   A0A232EI48   Q9VA94   W8B9K3   Q8MZY2   A0A1Q3F6G7   A0A3B0KVP4   A0A1W4X6D0   A0A034VQK3   A0A0K8U130   Q17CJ9   A0A0L0BZP6   Q29C24   B4GNP6   A0A182SRI4   K7IYW5   K7J1Y0   E2C646   A0A0A1X4V7   A0A182KA51   B0X4F2   F5HK94   A0A182HUB6   A0A1L8D6I7   A0A067QIN8   A0A182JFM4   A0A182JI20   B4JEM7   A0A212EQ61   A0A0C9RPQ9   W5J5Z7   A0A084W6J5   A0A182M1I4   W5J374   A0A195FTS5   A0A151JS66   A0A182M1I7   A0A182H3A8   B0X4F3   H9JM62   A0A3S2NP26   A0A1B6MMW0   A0A1S4F557   A0A1S4F5C8   A0A1W4WVL1   A0A084W6J6   Q17EY7   A0A1Y1MK99   F4WBY7   A0A1I8N2Y4   A0A1Y1LF74   T1PM50   A0A0A9ZCN0   A0A067RJC1   A0A146KPE5   A0A291P0N7   A0A182JYF7   Q8N001   A0A2J7Q0J6   A0A1J1HM95   A0A1I8PAY4  

Pubmed

19121390    24500170    26354079    28986331    22118469    17994087    + More
20353571    20691782    12524345    17550304    28648823    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    24495485    25348373    17510324    26108605    15632085    20075255    20798317    25830018    12364791    14747013    17210077    24845553    20920257    23761445    24438588    26483478    28004739    21719571    25315136    25401762    26823975   

EMBL

BABH01043271    BABH01043272    HQ704865    AET36545.1    RSAL01000244    RVE43603.1    + More
JX531674    AGO45859.1    HQ704866    AET36546.1    KQ460325    KPJ15745.1    KPJ15746.1    KQ459564    KPI99678.1    ODYU01002605    SOQ40327.1    NWSH01000559    PCG75659.1    MF687531    ATJ44457.1    GEYN01000134    JAV01995.1    JX531659    AGO45844.1    NWSH01000211    PCG78358.1    AGBW02009734    OWR50018.1    PCG75660.1    JX531665    AGO45850.1    LBMM01016179    KMQ84512.1    CH964272    EDW84429.1    CH902617    EDV44111.1    AJWK01009460    AJWK01009461    GDIQ01004277    JAN90460.1    ODYU01012535    SOQ58905.1    CCAG010012086    EZ422854    ADD19130.1    CH940652    EDW59212.1    GEDC01030129    GEDC01013889    JAS07169.1    JAS23409.1    GU952764    ADO85597.1    GECZ01031245    JAS38524.1    AF482926    AAM28501.1    GECU01021427    GECU01014371    GECU01009143    JAS86279.1    JAS93335.1    JAS98563.1    CH933806    EDW14558.1    CM000364    EDX14986.1    CM000160    EDW99077.1    NNAY01004348    OXU18023.1    AE014297    AY047565    AAF57020.1    AAK77297.1    GAMC01011209    GAMC01011208    JAB95347.1    AF482918    AAM28493.1    GFDL01011942    JAV23103.1    OUUW01000041    SPP89936.1    GAKP01015109    JAC43843.1    GDHF01034036    GDHF01031892    GDHF01023085    JAI18278.1    JAI20422.1    JAI29229.1    CH477308    EAT44022.1    JRES01001112    KNC25461.1    CM000070    EAL26822.2    CH479186    EDW39372.1    GL452916    EFN76589.1    GBXI01008396    GBXI01007656    JAD05896.1    JAD06636.1    DS232338    EDS40305.1    AAAB01008859    EGK96646.1    APCN01000618    GEYN01000124    JAV02005.1    KK853306    KDR08706.1    CH916369    EDV93158.1    AGBW02013325    OWR43604.1    GBYB01010460    JAG80227.1    ADMH02002143    ETN58290.1    ATLV01020821    KE525308    KFB45839.1    AXCM01001395    ETN58291.1    KQ981276    KYN43687.1    KQ978543    KYN30213.1    JXUM01107306    JXUM01107307    JXUM01107308    JXUM01107309    KQ565130    KXJ71303.1    EDS40306.1    BABH01033466    RSAL01000020    RVE52654.1    GEBQ01002690    JAT37287.1    KFB45840.1    CH477278    EAT45071.1    GEZM01029031    JAV86162.1    GL888067    EGI68276.1    GEZM01060604    JAV70980.1    KA649803    KA649804    AFP64433.1    GBHO01001405    GBHO01001404    JAG42199.1    JAG42200.1    KK852437    KDR23917.1    GDHC01021497    JAP97131.1    MF687523    ATJ44449.1    AF482899    AAM33369.1    NEVH01019966    PNF22107.1    CVRI01000009    CRK88658.1   

Proteomes

UP000005204    UP000283053    UP000053240    UP000053268    UP000218220    UP000007151    + More
UP000036403    UP000092443    UP000078200    UP000007798    UP000007801    UP000092445    UP000092461    UP000092444    UP000091820    UP000008792    UP000192221    UP000009192    UP000000304    UP000002282    UP000215335    UP000000803    UP000268350    UP000192223    UP000008820    UP000037069    UP000001819    UP000008744    UP000075901    UP000002358    UP000008237    UP000075881    UP000002320    UP000007062    UP000075840    UP000027135    UP000075880    UP000001070    UP000000673    UP000030765    UP000075883    UP000078541    UP000078492    UP000069940    UP000249989    UP000007755    UP000095301    UP000235965    UP000183832    UP000095300   

PRIDE

H9JYD0    G9BY58    T1RU52    G9BY59    Q9VA94    H9JM62    + More

Pfam

PF00487   FA_desaturase

Interpro

IPR015876   Acyl-CoA_DS        + More
IPR005804   FA_desaturase_dom       
IPR001522   FADS-1_CS       

CDD

cd03505  Delta9-FADS-like

ProteinModelPortal

H9JYD0   G9BY58   A0A3S2NSR1   T1RU52   G9BY59   A0A194REN0   + More
A0A194RIH1   A0A194Q2W5   A0A2H1VHN0   A0A2A4JV26   A0A291P0E4   A0A1L8D6H7   T1RU43   A0A2A4K356   A0A212F8H4   A0A2A4JW88   T1RTD4   A0A0J7K2H2   A0A1A9XNV7   A0A1A9VPX3   B4NGT2   B3LZD2   A0A1A9ZF92   A0A1B0CEY1   A0A0P6IHM7   A0A2H1X0N9   A0A1B0GE34   D3TN52   A0A1A9WN17   B4M6D6   A0A1W4VQC5   A0A1B6DCJ1   E3TMU9   A0A1B6EKR5   Q8MZX4   A0A1B6IH88   B4K9T3   B4R1J8   B4PLU0   A0A232EI48   Q9VA94   W8B9K3   Q8MZY2   A0A1Q3F6G7   A0A3B0KVP4   A0A1W4X6D0   A0A034VQK3   A0A0K8U130   Q17CJ9   A0A0L0BZP6   Q29C24   B4GNP6   A0A182SRI4   K7IYW5   K7J1Y0   E2C646   A0A0A1X4V7   A0A182KA51   B0X4F2   F5HK94   A0A182HUB6   A0A1L8D6I7   A0A067QIN8   A0A182JFM4   A0A182JI20   B4JEM7   A0A212EQ61   A0A0C9RPQ9   W5J5Z7   A0A084W6J5   A0A182M1I4   W5J374   A0A195FTS5   A0A151JS66   A0A182M1I7   A0A182H3A8   B0X4F3   H9JM62   A0A3S2NP26   A0A1B6MMW0   A0A1S4F557   A0A1S4F5C8   A0A1W4WVL1   A0A084W6J6   Q17EY7   A0A1Y1MK99   F4WBY7   A0A1I8N2Y4   A0A1Y1LF74   T1PM50   A0A0A9ZCN0   A0A067RJC1   A0A146KPE5   A0A291P0N7   A0A182JYF7   Q8N001   A0A2J7Q0J6   A0A1J1HM95   A0A1I8PAY4  

PDB

4YMK     E-value=1.15083e-63,     Score=615

KEGG

101743669    K00507 stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] | (RefSeq) acyl-CoA Delta(11) des

PATHWAY

01040    Biosynthesis of unsaturated fatty acids - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)
01212    Fatty acid metabolism - Bombyx mori (domestic silkworm)

GO

GO:0016021   GO:0016717   GO:0006633   GO:0016491   GO:0004768   GO:0005506   GO:0006636   GO:0005789   GO:0006629   GO:0007165   GO:0016020   GO:0005515   GO:0051103   GO:0005524   GO:0008270   GO:0042555   GO:0048384   GO:0055114  

PANTHER

PTHR11351  

Length:

254

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

9.22682

Exp number, first 60 AAs:

0.50095

Total prob of N-in:

0.22596

outside

1  -  254

 

 

Pi

3.814244

Theta

7.865335

Tajima's D

-1.636222

CLR

1.090577

CSRT

0.0392980350982451

Interpretation

Uncertain