Gene

KWMTBOMO03648

Pre Gene Modal

BGIBMGA014550

Annotation

desaturase_[Bombyx_mori]

Location

Bomo_Chr6(-):14676093-14682858      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 2.781

CDS

ATGAAGTTGCTCTTGATGGCTTGCTTCTGCAGCAGTGGCCAGAATTCAATATACAACTGGGTGAGGGATCACAGACTCCATCACAAGTTTGCTGACACCGATGCCGACCCTCACAACGTGAAACGAGGCTTCTTCTTCTCCCACATAGGATGGCTGATGGTGAAGAAGAACGAAAGTGTCCTTACGAAGGGAAAGCTGATTGACATGAGTGACATAGAAAGCGATTCTCATTTGATGTTTGAACATAAATACCACAATCAATTAACAATCCTATTCTGTTTTCTAATACCAACATTAATGAACATCTTCTTGATCGGGGAAGATTGGAAGTGCGCTGTTGCCTGGCAATGCTTCATACGGTATCTCTACGTGCTGCATTGTGAACTGACTGTTAACAGTTTGGCTCATATGTACGGCTATAAACCTTATAACGTAAACATTGAAGCATCAGAGAATATTCTAGTTTCGGTCCTGACGTACGGCGAGGGCTATCACAACTTTCATCATGTCTTCCCATTCGACTTTCGTGCAGCAGAAACTATGGATTTCTTCAGTCTATCCACAAAGATAATCAGTACATTCGAGAAGATTGGTTGGACGTATGACCTCAAGCAAGCCAGTCCAGAAATGATCGAGGCGGCTCGTGACAAGCTAGGGGGTGATGGGTCTAAAGCTCACAATTAA

Protein

MKLLLMACFCSSGQNSIYNWVRDHRLHHKFADTDADPHNVKRGFFFSHIGWLMVKKNESVLTKGKLIDMSDIESDSHLMFEHKYHNQLTILFCFLIPTLMNIFLIGEDWKCAVAWQCFIRYLYVLHCELTVNSLAHMYGYKPYNVNIEASENILVSVLTYGEGYHNFHHVFPFDFRAAETMDFFSLSTKIISTFEKIGWTYDLKQASPEMIEAARDKLGGDGSKAHN

Cofactor

Fe cation

Similarity

Belongs to the fatty acid desaturase type 1 family.

Uniprot

H9JYD0   G9BY58   A0A2A4JV26   T1RU52   G9BY59   A0A3S2NSR1   + More
A0A2A4JW88   A0A194REN0   A0A194RIH1   A0A194Q2W5   A0A2H1VHN0   T1RU43   A0A291P0E4   A0A2A4K356   A0A1L8D6H7   T1RTD4   A0A212F8H4   A0A2H1X0N9   Q8MZX4   E3TMU9   A0A1B6DCJ1   B3LZD2   A0A1A9XNV7   A0A1A9VPX3   A0A0J7K2H2   A0A1W4VQC5   B4M6D6   B4NGT2   A0A1B0CEY1   A0A1A9WN17   A0A1W4X6D0   Q8MZY2   A0A1A9ZF92   A0A0P6IHM7   A0A1B0B1J8   A0A1B0GE34   D3TN52   B4R1J8   B4PLU0   Q9VA94   A0A1B6EKR5   A0A232EI48   A0A1I8N2Y4   Q8N001   A0A1Q3F6G7   Q29C24   B4GNP6   A0A1I8PAY4   A0A3B0KVP4   A0A1B6IH88   T1PM50   B4K9T3   W8B9K3   A0A067RJC1   A0A2J7Q0J6   K7J1Y0   A0A2J7Q0J2   K7IYW5   A0A1L8D6I7   A0A0A1X4V7   A0A1W4WVL1   A0A0L0BZP6   A0A067QIN8   A0A182SRI4   A0A034VQK3   Q17CJ9   A0A0K8U130   A0A1Y1LF74   A0A182H3A8   A0A182JFM4   A0A182KA51   A0A1B6MHV3   A0A1S4F5C8   A0A0A9ZCN0   Q17EY7   A0A1S4F557   B0X4F3   A0A3Q0IQ53   B4JEM7   D2A5U2   A0A212EQ61   Q8MZW0   A0A084W6J5   A0A146KPE5   A0A194R858   F5HK94   B3P7X0   A0A182HUB6   A0A182M1I7   B0X4F2   A0A151X2U1   A0A1B6MMW0   W5J5Z7   F4WBY7   A0A151JS66   E2C646   A0A2H4WB77   A0A3S2NP26   J9KA67  

Pubmed

19121390    24500170    26354079    28986331    22118469    12524345    + More
20691782    17994087    20353571    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    28648823    25315136    15632085    24495485    24845553    20075255    25830018    26108605    25348373    17510324    28004739    26483478    25401762    18362917    19820115    24438588    26823975    12364791    14747013    17210077    20920257    23761445    21719571    20798317   

EMBL

BABH01043271    BABH01043272    HQ704865    AET36545.1    NWSH01000559    PCG75659.1    + More
JX531674    AGO45859.1    HQ704866    AET36546.1    RSAL01000244    RVE43603.1    PCG75660.1    KQ460325    KPJ15745.1    KPJ15746.1    KQ459564    KPI99678.1    ODYU01002605    SOQ40327.1    JX531659    AGO45844.1    MF687531    ATJ44457.1    NWSH01000211    PCG78358.1    GEYN01000134    JAV01995.1    JX531665    AGO45850.1    AGBW02009734    OWR50018.1    ODYU01012535    SOQ58905.1    AF482926    AAM28501.1    GU952764    ADO85597.1    GEDC01030129    GEDC01013889    JAS07169.1    JAS23409.1    CH902617    EDV44111.1    LBMM01016179    KMQ84512.1    CH940652    EDW59212.1    CH964272    EDW84429.1    AJWK01009460    AJWK01009461    AF482918    AAM28493.1    GDIQ01004277    JAN90460.1    JXJN01007190    CCAG010012086    EZ422854    ADD19130.1    CM000364    EDX14986.1    CM000160    EDW99077.1    AE014297    AY047565    AAF57020.1    AAK77297.1    GECZ01031245    JAS38524.1    NNAY01004348    OXU18023.1    AF482899    AAM33369.1    GFDL01011942    JAV23103.1    CM000070    EAL26822.2    CH479186    EDW39372.1    OUUW01000041    SPP89936.1    GECU01021427    GECU01014371    GECU01009143    JAS86279.1    JAS93335.1    JAS98563.1    KA649803    KA649804    AFP64433.1    CH933806    EDW14558.1    GAMC01011209    GAMC01011208    JAB95347.1    KK852437    KDR23917.1    NEVH01019966    PNF22107.1    PNF22108.1    GEYN01000124    JAV02005.1    GBXI01008396    GBXI01007656    JAD05896.1    JAD06636.1    JRES01001112    KNC25461.1    KK853306    KDR08706.1    GAKP01015109    JAC43843.1    CH477308    EAT44022.1    GDHF01034036    GDHF01031892    GDHF01023085    JAI18278.1    JAI20422.1    JAI29229.1    GEZM01060604    JAV70980.1    JXUM01107306    JXUM01107307    JXUM01107308    JXUM01107309    KQ565130    KXJ71303.1    GEBQ01004508    JAT35469.1    GBHO01001405    GBHO01001404    JAG42199.1    JAG42200.1    CH477278    EAT45071.1    DS232338    EDS40306.1    CH916369    EDV93158.1    KQ971345    EFA05022.2    AGBW02013325    OWR43604.1    AF482940    AAM28515.1    ATLV01020821    KE525308    KFB45839.1    GDHC01021497    JAP97131.1    KQ460845    KPJ12051.1    AAAB01008859    EGK96646.1    CH954182    EDV53097.1    APCN01000618    AXCM01001395    EDS40305.1    KQ982566    KYQ54757.1    GEBQ01002690    JAT37287.1    ADMH02002143    ETN58290.1    GL888067    EGI68276.1    KQ978543    KYN30213.1    GL452916    EFN76589.1    KY172016    AUC64292.1    RSAL01000020    RVE52654.1    ABLF02025683   

Proteomes

UP000005204    UP000218220    UP000283053    UP000053240    UP000053268    UP000007151    + More
UP000007801    UP000092443    UP000078200    UP000036403    UP000192221    UP000008792    UP000007798    UP000092461    UP000091820    UP000192223    UP000092445    UP000092460    UP000092444    UP000000304    UP000002282    UP000000803    UP000215335    UP000095301    UP000001819    UP000008744    UP000095300    UP000268350    UP000009192    UP000027135    UP000235965    UP000002358    UP000037069    UP000075901    UP000008820    UP000069940    UP000249989    UP000075880    UP000075881    UP000002320    UP000079169    UP000001070    UP000007266    UP000030765    UP000007062    UP000008711    UP000075840    UP000075883    UP000075809    UP000000673    UP000007755    UP000078492    UP000008237    UP000007819   

PRIDE

H9JYD0    G9BY58    T1RU52    G9BY59    Q9VA94   

Pfam

PF00487   FA_desaturase

Interpro

IPR015876   Acyl-CoA_DS        + More
IPR005804   FA_desaturase_dom       
IPR001522   FADS-1_CS       

CDD

cd03505  Delta9-FADS-like

ProteinModelPortal

H9JYD0   G9BY58   A0A2A4JV26   T1RU52   G9BY59   A0A3S2NSR1   + More
A0A2A4JW88   A0A194REN0   A0A194RIH1   A0A194Q2W5   A0A2H1VHN0   T1RU43   A0A291P0E4   A0A2A4K356   A0A1L8D6H7   T1RTD4   A0A212F8H4   A0A2H1X0N9   Q8MZX4   E3TMU9   A0A1B6DCJ1   B3LZD2   A0A1A9XNV7   A0A1A9VPX3   A0A0J7K2H2   A0A1W4VQC5   B4M6D6   B4NGT2   A0A1B0CEY1   A0A1A9WN17   A0A1W4X6D0   Q8MZY2   A0A1A9ZF92   A0A0P6IHM7   A0A1B0B1J8   A0A1B0GE34   D3TN52   B4R1J8   B4PLU0   Q9VA94   A0A1B6EKR5   A0A232EI48   A0A1I8N2Y4   Q8N001   A0A1Q3F6G7   Q29C24   B4GNP6   A0A1I8PAY4   A0A3B0KVP4   A0A1B6IH88   T1PM50   B4K9T3   W8B9K3   A0A067RJC1   A0A2J7Q0J6   K7J1Y0   A0A2J7Q0J2   K7IYW5   A0A1L8D6I7   A0A0A1X4V7   A0A1W4WVL1   A0A0L0BZP6   A0A067QIN8   A0A182SRI4   A0A034VQK3   Q17CJ9   A0A0K8U130   A0A1Y1LF74   A0A182H3A8   A0A182JFM4   A0A182KA51   A0A1B6MHV3   A0A1S4F5C8   A0A0A9ZCN0   Q17EY7   A0A1S4F557   B0X4F3   A0A3Q0IQ53   B4JEM7   D2A5U2   A0A212EQ61   Q8MZW0   A0A084W6J5   A0A146KPE5   A0A194R858   F5HK94   B3P7X0   A0A182HUB6   A0A182M1I7   B0X4F2   A0A151X2U1   A0A1B6MMW0   W5J5Z7   F4WBY7   A0A151JS66   E2C646   A0A2H4WB77   A0A3S2NP26   J9KA67  

PDB

4YMK     E-value=3.15795e-54,     Score=533

KEGG

100862798    K00507 stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] | (RefSeq) acyl-CoA Delta(11) des

PATHWAY

01040    Biosynthesis of unsaturated fatty acids - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)
01212    Fatty acid metabolism - Bombyx mori (domestic silkworm)

GO

GO:0016021   GO:0016717   GO:0006633   GO:0016491   GO:0004768   GO:0006636   GO:0005506   GO:0005789   GO:0006629   GO:0007165   GO:0016020   GO:0005515   GO:0051103   GO:0005524   GO:0008270   GO:0042555   GO:0048384   GO:0055114  

PANTHER

PTHR11351  

SignalP

Position:   1 - 15,         Likelihood:  0.532914

 

 

Length:

227

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

21.6363

Exp number, first 60 AAs:

0.03722

Total prob of N-in:

0.13289

outside

1  -  227

 

 

Pi

17.595629

Theta

19.058607

Tajima's D

-1.092329

CLR

12.350829

CSRT

0.122793860306985

Interpretation

Uncertain