SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03643  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA006339
Annotation
PREDICTED:_uncharacterized_protein_LOC101735993_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 2.842
 

Sequence

CDS
ATGTCGTACTTACGAGTAACAAGTCTTCGAGACGTCATGCTGCTAGTTGAACCATCAATAATCATTCGAGGAGGCACGGCCGCGCTCATCTGCTCTAGAGACATGCAGGGGTCTCCATTGTACTCGGTCAAATGGTATCGCGGTAACCACGAGTTCTACAGATACACTCCTCTTGAAGAGCCAGCTACAAGAGTCTTTGGTTTACCTGGAGGCTATGTCGATATGAACAATTCGAACGGAACGCAAGTTTTGGTGCGAAGAATGGACTTGAGTCTGGCGGGGAACTTCAGTTGTGAGGTCACGGCTGACGCGCCATCCTTCGCCACTCAAATCAGCTACAAATTCATTGATATAATCGCCCTGCCCGAATCCGGCCCGGTATTAAAGGCGGATAAAGACCGGTACCAACCCGGGGAGGTGCTTCAGGCTAACTGCACGTCGTCTCCGGCGAGACCAGCTGCCAATCTCACGATATACATTAACGAAGAACCTCTTCGTTCATCAGAAACTAGCTTTCACCCATCAGAGAATGGGCTGCTGTGGACTAGTGTGAAGGCAGACGCTAAAGTCAGCTCAGAACTCTTCATCGGAGGAAGGATGAGGGTTGCCTGCGTGGCCACCATACACAATGTTTACAAAAACTCCTCGAATTTGGACTTCTTTACTCCAGAAACGGATCCTAGGCCAGAACGAATAACCCTGAACAGGAGTTCCAAAGCGTTTCCCAGCTGGATTTTCTTAATGTTCCTGCTCTTGCTGCCGATGATGGTGATGTCCCAGGACTACTTCGAATACGAAGACCTGCCTTCTTACGACGAGCAGAAGTACGAAGACACAATTAGATCAATGATCGGGGCCTGA
Protein
MSYLRVTSLRDVMLLVEPSIIIRGGTAALICSRDMQGSPLYSVKWYRGNHEFYRYTPLEEPATRVFGLPGGYVDMNNSNGTQVLVRRMDLSLAGNFSCEVTADAPSFATQISYKFIDIIALPESGPVLKADKDRYQPGEVLQANCTSSPARPAANLTIYINEEPLRSSETSFHPSENGLLWTSVKADAKVSSELFIGGRMRVACVATIHNVYKNSSNLDFFTPETDPRPERITLNRSSKAFPSWIFLMFLLLLPMMVMSQDYFEYEDLPSYDEQKYEDTIRSMIGA

Summary

EMBL
BABH01026121    BABH01026122    BABH01026123    NWSH01000391    PCG76735.1    KZ149893    + More
PZC78910.1    AGBW02009622    OWR50301.1    ODYU01004548    SOQ44552.1    KQ459011    KPJ04354.1    GECU01002923    JAT04784.1    ODYU01011091    SOQ56613.1    GEBQ01008472    JAT31505.1    KQ459455    KPJ00866.1    AGBW02010118    OWR49133.1    KPJ04360.1    JRES01000310    KNC32398.1    GGMS01016259    MBY85462.1    KQ460847    KPJ11966.1    BABH01026141    BABH01026142    UFQS01000016    UFQT01000016    SSW97425.1    SSX17811.1    GBHO01013148    GBHO01013147    GBRD01005522    GDHC01002014    JAG30456.1    JAG30457.1    JAG60299.1    JAQ16615.1    ADTU01007875    ADTU01007876    ADTU01007877    ADTU01007878    ADTU01007879    ADTU01007880    ADTU01007881    ADTU01007882    ADTU01007883    ADTU01007884    NWSH01001162    PCG72302.1    CH964232    EDW80640.1    BT125643    ADN05220.1    OUUW01000005    SPP80672.1    QOIP01000001    RLU26508.1    CH933806    EDW15346.2    CH902617    EDV42725.2    CH916374    EDV91545.1    KQ971326    EFA12550.2    CM000070    EDY67849.1    EDW15351.2    CH479179    EDW24093.1    EDV42723.1    KPU79877.1    EDW80643.2    SPP80673.1    CM000160    EDW97715.1    EDV91546.1    CH940650    EDW67914.2    AE014297    ACZ94931.2    CM000364    EDX12590.1    EDX12586.1    CH480827    EDW44753.1    EDW44758.1    AF325713    AY118373    BT023786    AAF55408.3    AAG50022.1    AAM48402.1    AAZ41795.1    AHN57374.1    KYB28506.1    CH954181    EDV48734.1    EDW97721.1    CVRI01000064    CRL05250.1    EDV48738.1    EDW67912.2    KRF83559.1    AAAB01008898    EAA09232.5    SPP80676.1    BT031152    ABX00774.1    GBXI01002560    JAD11732.1    KY031268    ATU83019.1    CP012526    ALC46275.1    CRL05293.1    GDHF01012276    GDHF01009407    JAI40038.1    JAI42907.1    GDHF01019965    JAI32349.1    GDHF01030613    JAI21701.1    GEZM01074057    JAV64686.1    AAF55404.2    EAL27476.3    KRK03927.1    GAMC01009746    JAB96809.1    AAZX01001586    AAZX01016438    GEBQ01007875    JAT32102.1    ABLF02022180    ABLF02022183    ABLF02022184    ABLF02022185    ABLF02022186    ABLF02022187    ABLF02022188    KRG01523.1    ALC46274.1    GDHC01007619    GDHC01001123    JAQ11010.1    JAQ17506.1    GBRD01002473    JAG63348.1    GBXI01001531    JAD12761.1    GBYB01005176    JAG74943.1    GGMR01015841    MBY28460.1    GEDC01020595    JAS16703.1    KK853336    KDR08348.1    KNC32396.1    CCAG010021858    KK107153    QOIP01000012    EZA56980.1    RLU15808.1    CH477353    EAT42841.1   
Pfam
PF08205   C2-set_2        + More
PF07686   V-set
Interpro
IPR036179   Ig-like_dom_sf        + More
IPR007110   Ig-like_dom       
IPR013162   CD80_C2-set       
IPR013783   Ig-like_fold       
IPR003599   Ig_sub       
IPR013106   Ig_V-set       
IPR003598   Ig_sub2       
SUPFAM
SSF48726   SSF48726       
Gene 3D

Ontologies

Topology

Length:
286
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
19.49274
Exp number, first 60 AAs:
0.19081
Total prob of N-in:
0.94358
inside
1  -  240
TMhelix
241  -  258
outside
259  -  286
 
 

Population Genetic Test Statistics

Pi
24.130221
Theta
25.985096
Tajima's D
0
CLR
10.633242
CSRT
0.375681215939203
Interpretation
Uncertain
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