SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03635
Pre Gene Modal
BGIBMGA006335
Annotation
hypothetical_protein_OBRU01_02225_[Operophtera_brumata]
Location in the cell
Mitochondrial   Reliability : 1.48 PlasmaMembrane   Reliability : 1.313
 

Sequence

CDS
ATGCCGGCCTGTGCGCCTGAGTTTTCCCGCCTCGCGCGTTCTAACACAGAGCTAGTCTTTTCGCCGCGCAAGAGATGCTCTCACCAGCCACCACCTTTCACGGCTTTGAGGCGATCTTTCTCGTCAACGTTTTCGCTTATACCAGAAGAACGTGCCATTAGCCCCGAGCGACCGCCGCCCGTGCCGCACCTGATTCGACTCCTCACCTGGGGACCTCGTCTAATGCTGCGCCCGGTCTTCGCTCTCCTCAGCATTGTCTCGCATCCGGCTTGGAAACAAATATTAGTGGTACTACCGACGCTGTGGATTGCTGCTTCGCTGTTTATATTCTGGAAATGTGTGCAGTGCCCTATAAGTGTTCTTAAGATGATTGCTCGAGTTATTAGTTCGAAGGGGAATAACAAGCCTCGGACAGTCCTCATCAGTGGCGGCAGTTCAGTGCAAGCTTTACATTTGGCGAGGAATTTCCATTCGGCCGGTGCGAGAGTAGTGGCTTTCGAAATAGAAGGACAGTTTGCGCTACTGAAATACTCAGCAGCTGTTCATAAATTCTATTCAGTGCCGAGGCCTAATCCCGCTGATCCTCTTGCCTATGCTCGAGCATTAAAAGCGATAGTGGAACAAGAGTCTGTTGTATTCTACGTGCCGGTGAGTTCAACGACACCGGCCTATTATGACGCTCTCGCAAAACCACACATGGAAGTGGTGGGATGTCAATGTTTTGTTCCTTGCGCTCGAGATGTCGTCACACTGGATGATCCTTTGGAATTAATGCGAGTCAGTCGTGCTGCGGGTCTGATCACTCCGCAATTCTGGGTCGTAGCGAGTGACGAAGATGTTCGCGCGTGGTACGACAGCGGAGCTTCTAAAGAGGGACGTCACTTCATTGCCAGCGCCGGAGCCCGAGGTGCTCGTGATCGCTTACGTTTTGTGATGCCCGAAGAGAAAACACAATTCAGATTCCCCCGTGAAATCAGCGCTGAAAAGCCTTGGGTCATTGTCCGAGAGCCTAAAGGAGAAAAAATCGTTACGTGCACAACTCTGAAGGAATCTCGTGCGGTCAATAATGTGACGTGCCGCGTGGATGCTGCCCGCAAAGGTCTCGTTCCACAGAAAGATGACGAAGCTGATGCTTGGGTTCAAAGATTCGTGTCATTCCTTGCGCCAGTCAGACCCATGACGGGGCACGTGTCGTTCAGGCTCGTTCGTGAAGAAAATCCATCGAACGGGCACTCGAATAAGCTTATAGCCATCGGTGCGAGGGTTGGAGTGTCTCTACCGTACTTATGTCAAGGGCAGACCAGGTGCGGACACGCGGCGGCCGTCGGGAAGCTGCTGGATACAGTTTTGGACACGCGCGAAGCATTATTCGCGTTTTGGGACCCGCTGCCGTACTGCGCGTACTACCAGTCCAGAATGCCGGAAGACCGACGGTCGCTGCCGCCGGAGCCGTGCAAGACACCACCGAATGTTCCCCTCTGA
Protein
MPACAPEFSRLARSNTELVFSPRKRCSHQPPPFTALRRSFSSTFSLIPEERAISPERPPPVPHLIRLLTWGPRLMLRPVFALLSIVSHPAWKQILVVLPTLWIAASLFIFWKCVQCPISVLKMIARVISSKGNNKPRTVLISGGSSVQALHLARNFHSAGARVVAFEIEGQFALLKYSAAVHKFYSVPRPNPADPLAYARALKAIVEQESVVFYVPVSSTTPAYYDALAKPHMEVVGCQCFVPCARDVVTLDDPLELMRVSRAAGLITPQFWVVASDEDVRAWYDSGASKEGRHFIASAGARGARDRLRFVMPEEKTQFRFPREISAEKPWVIVREPKGEKIVTCTTLKESRAVNNVTCRVDAARKGLVPQKDDEADAWVQRFVSFLAPVRPMTGHVSFRLVREENPSNGHSNKLIAIGARVGVSLPYLCQGQTRCGHAAAVGKLLDTVLDTREALFAFWDPLPYCAYYQSRMPEDRRSLPPEPCKTPPNVPL

Summary

EMBL
BABH01026089    NWSH01000017    PCG80772.1    ODYU01007354    SOQ50048.1    KZ149893    + More
PZC78919.1    JTDY01000164    KOB78491.1    KQ460647    KPJ13161.1    KQ459011    KPJ04349.1    AGBW02010943    OWR47477.1    AK403144    BAM19586.1    GAIX01010638    JAA81922.1    RSAL01000394    RVE41983.1    ACPB03006188    NEVH01006569    PNF37838.1    KK852593    KDR20669.1    GFTR01007017    JAW09409.1    GEMB01004035    JAR99226.1    AJVK01012809    AJWK01018029    KQ971312    EEZ97965.1    GALX01003104    JAB65362.1    GDHC01012002    JAQ06627.1    GBHO01000277    GBHO01000276    JAG43327.1    JAG43328.1    GEDC01025477    JAS11821.1    KB632375    ERL93853.1    APGK01033277    KB740866    ENN78550.1    KK854827    PTY19060.1    GEZM01038144    JAV81767.1    LBMM01010065    KMQ87691.1    KQ977728    KYN00258.1    ATLV01013823    KE524901    KFB38175.1    KQ981727    KYN37070.1    AXCM01000679    AXCN02000108    KQ976396    KYM92887.1    ADTU01011816    KK107648    QOIP01000008    EZA48324.1    RLU19970.1    APCN01002209    KQ434896    KZC10775.1    AAAB01008851    EAU77153.2    GGFK01005538    MBW38859.1    GL768788    EFZ11006.1    GGFM01006719    MBW27470.1    KQ760869    OAD58795.1    GGFM01001481    MBW22232.1    GECZ01025757    JAS44012.1    ADMH02001543    ETN62109.1    GFDL01006869    JAV28176.1    GL444981    EFN60315.1    JXUM01058742    KQ562016    KXJ76895.1    JXUM01045614    KQ561444    KXJ78570.1    CVRI01000006    CRK87836.1    KQ978602    KYN29931.1    KQ435720    KOX78691.1    CH477622    EAT38173.1    GECU01015342    JAS92364.1    GANO01004992    JAB54879.1    DS231831    EDS31314.1    GL448457    EFN84603.1    CM000160    EDW99005.1    GGFJ01004817    MBW53958.1    KZ288222    PBC32051.1    CH954182    EDV53915.1    GAMD01001475    JAB00116.1    CM000364    EDX14162.1    CH480815    EDW43431.1    KQ414614    KOC68882.1    AE014297    AY102657    AAF56237.1    AAM27486.1    CH902617    EDV44270.1    GAKP01000041    JAC58911.1    GBXI01007131    JAD07161.1    GGFJ01005225    MBW54366.1    GDHF01021546    JAI30768.1    GAMC01002874    JAC03682.1    CH964232    EDW81197.1    OUUW01000007    SPP82717.1    CM000070    EAL27954.1    CP012526    ALC47432.1    CH916369    EDV93048.1    CH933806    EDW14261.1    JRES01000321    KNC32305.1    CCAG010000199   
Interpro
IPR036291   NAD(P)-bd_dom_sf        + More
IPR013815   ATP_grasp_subdomain_1       
SUPFAM
SSF51735   SSF51735       
Gene 3D

Ontologies

Topology

Length:
493
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
4.54798999999999
Exp number, first 60 AAs:
3e-05
Total prob of N-in:
0.15728
outside
1  -  493
 
 

Population Genetic Test Statistics

Pi
23.277027
Theta
17.21727
Tajima's D
0.153269
CLR
1.580039
CSRT
0.422928853557322
Interpretation
Uncertain
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