Gene

KWMTBOMO03626  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA006263

Annotation

PREDICTED:_T-complex_protein_1_subunit_alpha_[Amyelois_transitella]

Location

Bomo_Chr6(-):13728381-13735007      View in EpiBrowser

Full name

T-complex protein 1 subunit alpha      

Alternative Name

CCT-alpha
Chaperonin containing TCP1 subunit 1

Location in the cell

Cytoplasmic   Reliability : 3.79

CDS

ATGTCGACTATAGCTGCACCTTTGTCTGTAGCAGGGACAAGATCCTGCGGAGACCCAGTGAGAACACAAAATGTAATGGCAGCAGCGGCTATAGCAAACATAGTAAAGAGCTCCCTTGGGCCAGTTGGTCTGGATAAGATGCTGGTTGACGATATTGGGGATGTTACAGTCACTAACGATGGTGCCACAATATTAAAAATGCTGGAAGTGGAGCATCCTGCTGCCAAAGTCTTAGTGGAACTAGCACAGCTACAAGATGAAGAAGTTGGAGATGGTACCACATCTGTAGTCATCATTGCTGCTGAACTACTTAAGAATGCAGATGAACTAGTGAAGACCAAGATCCATCCAACAAGCATTATCTCAGGATACCGTCTCGCCTGTAAAGAAGCAGTCAAGTACATTCAGGATAACCTCACAGTAACAGTAGAGTCACTTGGCAGGCCGTCTCTGATCAACACAGCCAAAACAACCATGTCATCTAAACTAATTGGAGCTGATGCAGATTTCTTCTCGGAGATGGTTGTAGATGCTGCACAGGCAATCAAAACAATGAACCCCAGAGGAAATACTATATACCCTATCAAAGCTATTAACATTCTGAAAGCCCACGGCCGGAGTGCAAGGGAAAGTGTACTTGTCAAAGGCTATGCTCTGAACTGCACTGTAGCATCACAGGCAATGCCGAAGAAGATTCTCAATGCAAAGATCGCCTGCCTTGATTTTTCTCTGCAAAAAACTAAGATGAAATTGGGTGTTCAGGTTCTTGTGACTGATCCAGAAAAATTAGAAGCGATCCGTGCAAGAGAACTGGACATTACCAAAGAACGCTTACAGAAGATTCTCGCTACCGGCGTCAATGTTATTCTTTGCACCGGAGGCATTGATGATCTATGTTTGAAATATTTCGTTGAAGCTGGAGCAATGGGTGTCAGGAGGTGTAAGAAGGCAGATCTAAAAAGGATTGCCAAGGCTACTGGAGCTACTTTTTTGACTTCTTTGACTAATATGGATGGTGAGGAAGTATTTGAAGCTAATATGATTGGTGAAGCCGCTGAAGTGATCCAGGAACAAATCTGTGATGATCAACTTATTTTAATCAAAGGGCCGGCAGCGCGCACGGCCGCGTCGCTTATCCTGCGCGGTCCCACGGACGCGTACTGCGACGAGATGGAGCGGTCCGCGCACGACGCGCTGTGCGCCGTGCGCCGCGTGCTGGAGTCCGGCAAGCTCGTGCCCGGCGGCGGCGCGGTCGAAGCGGCACTCTCCATCTACTTGGAGAACTTTGCAACTACCCTCAGCTCCCGCGAGCAGTTGGCTATTGCAGCGTTTGCGCAGTCTCTCCTCGTGATCCCGAAGACGTTGGCGGTTAACGCGGCGCGGGACGCCACCGACCTCGTCGCCAAGCTACGAGCCTACCACAACTCATCACAAACCAAGGTGGAACACGCAAACCTCAAATGGGTAGGTCTGGATCTAACAGAAGGAACACTCCGGGACAACCTCGCAGCCGGAGTCCTCGAGCCAGCGATATCCAAGATCAAATCGTTGAAATTCGCAACAGAAGCTGCGATTACTATTCTCCGTATTGACGATATGATCAAACTCGACCCCGAACAAAGAGGCAAGAGCTATGAAGACGCTTGCAATGCCGGTGAACTGGACTAA

Protein

MSTIAAPLSVAGTRSCGDPVRTQNVMAAAAIANIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACKEAVKYIQDNLTVTVESLGRPSLINTAKTTMSSKLIGADADFFSEMVVDAAQAIKTMNPRGNTIYPIKAINILKAHGRSARESVLVKGYALNCTVASQAMPKKILNAKIACLDFSLQKTKMKLGVQVLVTDPEKLEAIRARELDITKERLQKILATGVNVILCTGGIDDLCLKYFVEAGAMGVRRCKKADLKRIAKATGATFLTSLTNMDGEEVFEANMIGEAAEVIQEQICDDQLILIKGPAARTAASLILRGPTDAYCDEMERSAHDALCAVRRVLESGKLVPGGGAVEAALSIYLENFATTLSSREQLAIAAFAQSLLVIPKTLAVNAARDATDLVAKLRAYHNSSQTKVEHANLKWVGLDLTEGTLRDNLAAGVLEPAISKIKSLKFATEAAITILRIDDMIKLDPEQRGKSYEDACNAGELD

Subunit

Heterooligomeric complex of about 850 to 900 kDa that forms two stacked rings, 12 to 16 nm in diameter.

Similarity

Belongs to the TCP-1 chaperonin family.

Keywords

ATP-binding   Chaperone   Complete proteome   Cytoplasm   Nucleotide-binding   Reference proteome  

Feature

chain  T-complex protein 1 subunit alpha

Uniprot

H9J9S0   A0A2H1X176   A0A2A4J635   A0A2W1BZQ1   A0A194R7F5   A0A194QLM0   + More
A0A1Q3F3Z1   A0A1Y1MHZ9   A0A1B6C7B4   Q16W74   A0A023ETW5   A0A1J1J805   A0A1S4FLY4   B0WAH6   D6W9B9   A0A182QWL6   A0A182M9J5   A0A2J7QHG0   A0A182PD72   A0A182ND00   A0A182RV59   A0A182IZ98   A0A182V664   A0A182L730   A0A182XG44   Q7QB14   A0A182ID90   W8BY94   A0A182JPK1   A0A182SBM9   A0A0T6B8U0   A0A1B6G8J9   A0A182TLV2   V5RFY2   A0A084VBH0   A0A0L0BY42   A0A1I8Q4Q0   A0A182W1A2   A0A034WEB5   Q4AE76   A0A0K8WH30   A0A0A1WVM5   V5IAP2   Q298V2   B4G4Q0   A0A3B0KVS9   A0A2M3Z592   T1PFQ5   A0A232END1   K7J033   A0A182FPT9   T1DFU8   U5EWB8   A0A2M4BIZ6   A0A2M4A846   W5JPB5   A0A1W4WP68   B3LZZ2   J3JW40   A0A2A3E1J8   A0A088AVZ9   B4NJT3   B4MB83   B3P8P1   A0A1W4W414   A0A1L8DUD6   B4R030   A4V391   B4HEA1   P12613   B4PMA7   B4KC16   B4JSB6   A0A1A9WGN5   A0A1S3DVC9   A0A0T6AZW5   A0A1B0B2L3   A0A1A9YSY7   A0A067R174   A0A0K8TS69   A0A182G585   A0A336M5Y4   A0A158NJ24   A0A026WPB8   S4PEJ7   A0A1A9ZZ30   A0A212F181   D3TLP9   A0A1A9VFV7   E0VDT3   A0A182Y5D7   A0A1B6HYR1   A0A2J7QHG1   E9GKZ7   A0A0P5W1F5   A0A0P4ZAW1   A0A0P5TY06   A0A0M4ERP9   A0A0P5TRD2   A0A0P6FRS9  

Pubmed

19121390    28756777    26354079    28004739    17510324    24945155    + More
26483478    18362917    19820115    20966253    12364791    14747013    17210077    24495485    24438588    26108605    25348373    16184765    25830018    15632085    17994087    25315136    28648823    20075255    20920257    23761445    22516182    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    3146529    12537569    17550304    24845553    26369729    21347285    24508170    23622113    22118469    20353571    20566863    25244985    21292972   

EMBL

BABH01026063    ODYU01012664    SOQ59095.1    NWSH01003141    PCG66872.1    KZ149893    + More
PZC78925.1    KQ460647    KPJ13170.1    KQ459011    KPJ04341.1    GFDL01012759    JAV22286.1    GEZM01032423    JAV84588.1    GEDC01027930    JAS09368.1    CH477573    EAT38836.1    JXUM01058052    JXUM01058053    GAPW01000783    KQ561984    JAC12815.1    KXJ76987.1    CVRI01000073    CRL07614.1    DS231872    EDS41399.1    KQ971312    EEZ98476.1    AXCN02001566    AXCM01001325    NEVH01013976    PNF28020.1    AAAB01008880    EAA08611.4    APCN01005054    GAMC01002228    JAC04328.1    LJIG01009109    KRT83738.1    GECZ01011030    JAS58739.1    KF621132    AHB33468.1    ATLV01006810    KE524386    KFB35314.1    JRES01001160    KNC24958.1    GAKP01005041    JAC53911.1    AB194475    BAE17115.1    GDHF01001955    JAI50359.1    GBXI01011616    JAD02676.1    GALX01000840    JAB67626.1    CM000070    EAL27853.1    CH479179    EDW24566.1    OUUW01000013    SPP88118.1    GGFM01002931    MBW23682.1    KA647586    AFP62215.1    NNAY01003191    OXU19832.1    GAMD01003021    JAA98569.1    GANO01001490    JAB58381.1    GGFJ01003898    MBW53039.1    GGFK01003652    MBW36973.1    ADMH02000944    ETN64609.1    CH902617    EDV44182.1    BT127458    AEE62420.1    KZ288451    PBC25575.1    CH964272    EDW85045.1    CH940656    EDW58354.1    CH954182    EDV54136.1    GFDF01004044    JAV10040.1    CM000364    EDX13936.1    AE014297    AAN13906.1    CH480815    EDW43198.1    M21159    AY118416    CM000160    EDW98012.1    CH933806    EDW16889.1    CH916373    EDV94656.1    LJIG01016411    KRT80681.1    JXJN01007683    KK852785    KDR16554.1    GDAI01000404    JAI17199.1    JXUM01042913    KQ561343    KXJ78896.1    UFQS01000609    UFQT01000609    SSX05331.1    SSX25692.1    ADTU01017356    KK107145    EZA57501.1    GAIX01004472    JAA88088.1    AGBW02010943    OWR47487.1    CCAG010014864    EZ422351    ADD18627.1    DS235088    EEB11539.1    GECU01027893    JAS79813.1    PNF28021.1    GL732550    EFX79881.1    GDIP01131700    GDIP01092293    GDIP01071546    GDIP01043251    GDIQ01077549    GDIQ01054014    LRGB01002190    JAM11422.1    JAN17188.1    KZS08616.1    GDIP01219432    JAJ03970.1    GDIP01122385    JAL81329.1    CP012526    ALC47235.1    GDIP01123844    JAL79870.1    GDIQ01046322    JAN48415.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000053268    UP000008820    UP000069940    + More
UP000249989    UP000183832    UP000002320    UP000007266    UP000075886    UP000075883    UP000235965    UP000075885    UP000075884    UP000075900    UP000075880    UP000075903    UP000075882    UP000076407    UP000007062    UP000075840    UP000075881    UP000075901    UP000075902    UP000030765    UP000037069    UP000095300    UP000075920    UP000001819    UP000008744    UP000268350    UP000095301    UP000215335    UP000002358    UP000069272    UP000000673    UP000192223    UP000007801    UP000242457    UP000005203    UP000007798    UP000008792    UP000008711    UP000192221    UP000000304    UP000000803    UP000001292    UP000002282    UP000009192    UP000001070    UP000091820    UP000079169    UP000092460    UP000092443    UP000027135    UP000005205    UP000053097    UP000092445    UP000007151    UP000092444    UP000078200    UP000009046    UP000076408    UP000000305    UP000076858    UP000092553   

PRIDE

H9J9S0    A0A088AVZ9    A4V391    P12613   

Pfam

PF00118   Cpn60_TCP1

Interpro

IPR027409   GroEL-like_apical_dom_sf        + More
IPR027413   GROEL-like_equatorial_sf       
IPR002194   Chaperonin_TCP-1_CS       
IPR017998   Chaperone_TCP-1       
IPR027410   TCP-1-like_intermed_sf       
IPR002423   Cpn60/TCP-1       
IPR012715   Chap_CCT_alpha       

SUPFAM

SSF48592   SSF48592        + More
SSF54849   SSF54849       
SSF52029   SSF52029       

Gene 3D

1.10.560.10     3.30.260.10     3.50.7.10    

CDD

cd03335  TCP1_alpha

ProteinModelPortal

H9J9S0   A0A2H1X176   A0A2A4J635   A0A2W1BZQ1   A0A194R7F5   A0A194QLM0   + More
A0A1Q3F3Z1   A0A1Y1MHZ9   A0A1B6C7B4   Q16W74   A0A023ETW5   A0A1J1J805   A0A1S4FLY4   B0WAH6   D6W9B9   A0A182QWL6   A0A182M9J5   A0A2J7QHG0   A0A182PD72   A0A182ND00   A0A182RV59   A0A182IZ98   A0A182V664   A0A182L730   A0A182XG44   Q7QB14   A0A182ID90   W8BY94   A0A182JPK1   A0A182SBM9   A0A0T6B8U0   A0A1B6G8J9   A0A182TLV2   V5RFY2   A0A084VBH0   A0A0L0BY42   A0A1I8Q4Q0   A0A182W1A2   A0A034WEB5   Q4AE76   A0A0K8WH30   A0A0A1WVM5   V5IAP2   Q298V2   B4G4Q0   A0A3B0KVS9   A0A2M3Z592   T1PFQ5   A0A232END1   K7J033   A0A182FPT9   T1DFU8   U5EWB8   A0A2M4BIZ6   A0A2M4A846   W5JPB5   A0A1W4WP68   B3LZZ2   J3JW40   A0A2A3E1J8   A0A088AVZ9   B4NJT3   B4MB83   B3P8P1   A0A1W4W414   A0A1L8DUD6   B4R030   A4V391   B4HEA1   P12613   B4PMA7   B4KC16   B4JSB6   A0A1A9WGN5   A0A1S3DVC9   A0A0T6AZW5   A0A1B0B2L3   A0A1A9YSY7   A0A067R174   A0A0K8TS69   A0A182G585   A0A336M5Y4   A0A158NJ24   A0A026WPB8   S4PEJ7   A0A1A9ZZ30   A0A212F181   D3TLP9   A0A1A9VFV7   E0VDT3   A0A182Y5D7   A0A1B6HYR1   A0A2J7QHG1   E9GKZ7   A0A0P5W1F5   A0A0P4ZAW1   A0A0P5TY06   A0A0M4ERP9   A0A0P5TRD2   A0A0P6FRS9  

PDB

4B2T     E-value=0,     Score=1971

KEGG

101742382    K09493 T-complex protein 1 subunit alpha | (RefSeq) T-complex protein 1 subunit alpha

GO

GO:0005737   GO:0006457   GO:0005524   GO:0051082   GO:0005832   GO:0030707   GO:0005829   GO:0016021   GO:0004674   GO:0005515   GO:0051103   GO:0008270   GO:0042555   GO:0048384  

Subcellular location

Cytoplasm  

Length:

555

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.073

Exp number, first 60 AAs:

0.01102

Total prob of N-in:

0.00106

outside

1  -  555

 

 

Pi

18.537183

Theta

16.015021

Tajima's D

0.585042

CLR

0.165525

CSRT

0.553372331383431

Interpretation

Uncertain