Gene
KWMTBOMO03619
Annotation
PREDICTED:_E3_ubiquitin-protein_ligase_RNF19B-like_[Bombyx_mori]
Full name
RBR-type E3 ubiquitin transferase
Location in the cell
Nuclear Reliability : 2.383
Sequence
CDS
ATGGATACCAAGTTTCAACTCGTGGTATCTCCCCTGGTGGCGAGTCTGGCCGTGGGTATCGGAGTGCCGATCCTGTTGTTCTACGTGTACGGCGTGGTGCCGGTGTCGCTGTGCCGGGCGGGGGGATGCGCCGCGCCGCCGCCCCACGAGGACGACGCCGCCTCCAGGAGACTGGAGCCCAGTATTGGCGATGCGTCCCTGTCGGCGGGGTCGGCGGGGGGTGCAGGGTGGGCGGGGGGCGCGGGGGCGGCGGGCCCGGGCGCGGCTTCACTCGCCGGCCTGGCGGGCTCGCTGCAGGACGCGTCGCCGGCTGCCGCCTCATGGCCCGACGACCTGCCCTCCACCAGCGCTCTGCCCAATCCGACCCCTTCCAGTTCGAGTCGGTCGCGTCGGCTCCGCTCGTTGTTCCTGTACGGGTCCCCCACGCCCCCGGACCTCGAGGCGGGACCGTCCGTCCCACCCCCGCCGCCCGCCCCCTCCCTCGCCGTGCACGTGACCACGACGTGCGAGACGCACTCCCCCACTCGTTCCTCGTAA
Protein
MDTKFQLVVSPLVASLAVGIGVPILLFYVYGVVPVSLCRAGGCAAPPPHEDDAASRRLEPSIGDASLSAGSAGGAGWAGGAGAAGPGAASLAGLAGSLQDASPAAASWPDDLPSTSALPNPTPSSSSRSRRLRSLFLYGSPTPPDLEAGPSVPPPPPAPSLAVHVTTTCETHSPTRSS
Summary
Catalytic Activity
[E2 ubiquitin-conjugating enzyme]-S-ubiquitinyl-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-N(6)-ubiquitinyl-L-lysine.
Similarity
Belongs to the RBR family.
Uniprot
EC Number
2.3.2.31
EMBL
Interpro
Gene 3D
ProteinModelPortal
Ontologies
PANTHER
Topology
Length:
178
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
26.64072
Exp number, first 60 AAs:
22.88287
Total prob of N-in:
0.87920
POSSIBLE N-term signal
sequence
inside
1 - 6
TMhelix
7 - 29
outside
30 - 178
Population Genetic Test Statistics
Pi
27.272832
Theta
20.338375
Tajima's D
1.129346
CLR
0.102857
CSRT
0.703064846757662
Interpretation
Uncertain
