Gene

KWMTBOMO03617

Annotation

PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC106708942_[Papilio_machaon]

Location

Bomo_Chr6(-):13625761-13631437      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 1.79

CDS

ATGTCCGAGAAGGACCTTGAAGTAAGCTCCTTAAGAGCCAATGTCGTGTCAGACGATGACATGGCCACAGTCGGTTCGGCCCAATCGTCGACCCGCTCGTCGCCGACACGACGACAGCGGAAAAGGGTCCTTAATATAAGCTCAGACGGGTTGAGCAGCAGCTCCGGTTCGGAGGCTCAGGGCCCGTCAGTTGCGAAGCCCAGAGCCGTGACGCCATCAAAGCGTGGAAGGGGACGCCCTCCGACCACGAGGCAGTGCGTTGGCATGGCTGCTGCCAGGAAGGCGTGCCTTAGGGCCCAAAGAGAGGAGAGGGAGTTCACAGAGAGCGCGCGCACCACGCGCCAGAAGAAGAGAGCGGCTGAGGGATCTGTCCCTAAGCCTGATGCCGAGCGTAGGCTCCATCAGAGTGCCGAGGTGGCTCTGACGGTGGCCGCCAAATCTAGTAGCCCGAAGGGCACGTATGTGCGTGCATTGAAGGAGTTGGCGGCCACCGTCAAGGAGGCCACGGAGGACCTTGTGGGCCGCACCGCAACTGAAGAGGCTGAAAGACTGCGTGCGATCAACGCCAAGCAGGAGCAGGAGATCCTACAGCTTCGCAAGGAGCTTGATGAAATTAGGAGGGAGCTGGCTACGGTCTCGCAGGTGCTAGGAAATGCACCAGCCGCAGCCCCGGCCCCAAACACCGAAGAAGAAGAGGAGGAGTTGCGCCTCCAGCGCATTATGCGAGCTGTCGGCACGATGCTCGACGCTCGCTTTGCGGGGCTAGAGGGACGGCTTCTACCGGAGCCGCGAATGCGACCACCGCTAGCGGCGGACAGGCGGAAGAGCCGCGAAAAATCACCGGACCCTCCTATGGTCGTAGACGCTACACTGAATTCGGCGCCATTATTGAAACCAGTGCCATCTACAACATCGGCGAAAAAGAGGATACGAGGCCCCAGAAGAAAAGCCACTGCGCAAGTGGCTCCACCTGGAACGCCCACCCTCCTCCCGGCTCCAGCTTCCTTGATCGAGAGCTGGTCAACGGTCACCCGTAGGGGCACTCGGCCGAGGGAGGGAGCAGTGAGGACGGTTCCAGTGGTAGCACCCGCTGAAGCGGGAAAGAAAAACCCGTCCTCTGCAAAGAGGAAAGAGAAGAAGCTGCGTCCTCCGCGCTCTCAAGCTGTTGTGCTCAAGCTGCAGCCGGAGGCTGTAGAAAGAGGACTCACATACCGCAGCGTACTCGCCGAAGCGAGAGCCAAGGTGGACCCCGGGGCACTCGGAATCCCCATCCAGCGCATCCGGTCTGCAGTGACTGGGGCCAAGGTGTTGGTAGTGGAAGGTGCTGATCAGAGCGCCAAGGCTGATCTCCTGGCCCAAAAGCTTCGTGAGGTTCTGTCCGCGGAGGGGGTCACCGTGACCCGGCCAGTGACGACTGCAGCCATCCGCATCAGCGGGCTGGATGACTCCTTGACGCCGGAGGAAGTAGCCGCTGAGTTCGCCCGGATTGGCGAATGCACTCTTGAAGCGGTGAAGATCGGAGAGATCAAGTCTGGCCCAAGTGGGATGGGTCAGGTGTTGGTTCGGTTGCCCGTCGCTGCCGCGACGAAGGTCCTCGCCGTACCGAAATTGAGGGTCGGTTGGAGCGTGCTCCGCGCTCATCTGCTAGAGGCTAAGAAGCTACAGTGCTTCCGATGCCATGAGCTAGGGCACGTGAGCGCTCGATGTCCGTCGTCGGTCGACCGCAGCCGTGATTGTTACCGGTGCGGCCAGACCGGCCACGTAGCGTCCGGCTGCTCTCTGGTGCCACACTGTGCTGTATGTGCCTCTGCCGGCAGACCGGCGGATCACGTCTCCGGGAGCAAGGCTTGTGCCAAGTCCCCGAGACCGAGACCTAGAAGAGGAGCTTCCGCTGCGCTTGAGCATGCGCGGAGGCAGCCCGGTGTCCTTCGATTCCTGCAGGGGAATCTCAATCACTCTGCCAGAGCTCAGGACCTTTTGTTCCAGAGCATGGCAGAGGGGTTGACCCATCTTGCGGTGGTCGCCGAGCCGTATCGGGTTCCTTCGAGCCCCGATTGGGCAGCCGATTTGGAGGGCCGAGTGGCTATCATCCGACGTTGTTGTGTAGGTGCTCCGCCCAGGTTCGACGTTGTCGAGAGAGGTTGCGGCTTTGTTGCTGTCCTCTGGGCCGAGGTATTCATATTGGGAGTGTACTTCTCCCCAAACAGGACGCTCGCCGAGTTTGAGGTTTTTCTCAGCGAGCTCAGCCGCGTCGTTGGGAGGTCGCACTCCCAACGGATACTCGTTCTCGGGGACCTCAACGCCAAGTCATTGGCTTGGGGATCCTCGAGGACGTGCCCCAGAGGTAGGGCGGTGGAGGAGTGGCTGGTCGGAAGCGGTCTTCTCGTCCTCAATCGTGGCGCAGAACTCACGTGCGTGCGACGTCTGGGCGGGTCCGTGGTTGACGTTACATTTGCCACGCCCGACGTGGCGAATCGCGTACGCGGTTGGGCCGTGATGGTCGGCGAGGAGACGCTCTCCGACCACCGCTACATTCGTTTCGGTGTCGCAGTGCCTCCGGCGGAGTCTATTCAGGGCTCTTCTTTGCTCTGCGGTGGCGGCGCGGGGGGTCCTCGTTGGGCCCAGAAGCGCCTCAACGTCGAGAGGTTGTGTGAGGCGGCTGTAGTCCAGGCATGGCGTCTTGACTCGCTTGGTGAGCCAGCAGACGTGTGCGAGGGGGTGGAGCATCTGCGCGAGGCGATGTCGCGGGTGTGCGACGCCGCTATGCCTCGCATTAGAGCTCTCGCTCCTAAACGCAGAGTCCACTGGTGGACTGAGGAGATCGCTAGCCAGCGCCGGTTGTGCGACGTCAGTCGTCGCGCATACCAACGGTATCGACGTCGAAGAACGCACCGGGACCCCGATGAGGAGGACCGACTGTACGAGGTGTACAGGATGGCCATAAGGGCCCTGCGCGTGGCTATCGGGGAGGCGAAGGAGGCTGCTTGGAACGACCTACTAGCTTCGCTCGACTGTGATCCCACCCTGCCGCCGGAGACATTGCAGCGGGTAGTCGGGGGTCTGTTTCCGGATTTTACCGGGACGGCCTTCGTCCCCCCTGTGATGACGACGATGCGGGTTGCTGATGGCAGGGAGCCTGCGGACGTTTCGCAGGCGGAGTTTGAATCGGCTGTGCAGAGGATGCGGGCGAAGCGCACGGCTCCCGGTCCCGATGGGATCTCGTCCCGAGCGTGGGCGCTCGCCTTGACGGGCGATGGTTTGGGGCCTGCCCTCCGAAGGCTGTTCAGCCGGTGCCTCCGTGAGGGCAGGTTCCCAGAGCCATGGAGGACTGGTCGGCTCGTCCTTATTCCTAAGGAGGGTCGGCCACGTGACGAACCGAACGGGTACCGCCCAATCGTCGTGCTGGACGAGGCCGGTAAGCTCTTCGAGCGCGTCATCGCTAATCGCCTTGTCCAGCACCTGGAAAACGTTGGGCCTGATTTGGCTCCTAACCAATACGGTTTCCGGAGGGGTCGCTCGACCGTGGACGCGGTCTTGCGTGTCCGCCATCTCTCCGATTGTGCGTGCTCCGAGGGGGGCGTGTTGTTGGCTGTGTCGATTGACATCGCCAACGCCTTCAACACGATCCCCTGGAGCACGATCGTGGAATCACTTCGGTTTCACCGCATCCCCAATAGTCTCCGCACCCTGATAGAGGACTACCTCTCAGGGCGGAGCGTGATTTTCCCTGAGAGAAGAGGATGGGGACGAAAAACGGTGTCGTGCGGGGTCCCACAGGGGTCGGTATTGGGACCACTCCTGTGGGACATCGGTTTCGACTGGGTCCTCCGCGGTGCTGGCCTGCGTGGCGTCGACGTGGTGTGCTATGCCGACGACACGTTGGTGACGGCTCGCGGAGCTGACTACAGGACCGCAGCGATCCTTGCAACGGCGGCGGTCTCCACCGTCGTTAGCCGCATTCGGAGACTAGGTCTTGAGGTGGCCCTCCACAAGTCTGAGGCCGTATGCTTTCACCCGGTTCGGAGAGGACCCCCTCCGGGCGCGACGCTCATAGTCGGTGGAGTATCGATCGCTGTCCAGCCGAAGCTCAAATATTTGGGCATCGTGCTGGACAGTCGATGGCGCTTCGACCACCATTTTGGTGAGTTGATTCCGAGGCTACTGGGCATGGCAGGTGCGTTAGTCCGTCTTCTGCCCAACGTTGGTGGTTGCAGCGTCGGTGTCCGACGCCTGTACCTGGGGGTCGTGCGCAGTATGGCCTTGTATGGCGCTCCCGTGTGGTCGCCCACACTCTCCGCACGCAATGCGGCGCTGCTGCTCCGAGCTCAGCGGGCGCTCGCGGTGAGGGTCATCAGGGGGTACCGTACGATCTCCCGAGAGGTCGCCTGCGCCCTCGCTGGTTCCCTTCCTTGGGATCTCGAGGCCGAGGTATTGGCTACGGTATACCGGCGCAGGACACAGTCCCTGGGTCGGGGACGGACACCCGGCCTGTCGGCTGTCAGTCGGTGGAGGCGTGCTGCGCGTCATCTGGCGTACGCTAAATGGAGGGAGCGGTTGCTGGAGGAACTTCATCAAACCTCAGCCACCCGCCGGCGCACTCTCGAGGCCCTGGTGCCCGTGCTGGAGACATGGTCAGATCGGCGACACGGCGTGCTCTCCTTCCGCCTTACGCAGGTCCTCTCGGGGCATGGCTGCTTCGGGAGGTACCTGTGGAGGGTTTGCAGGAGAGAGCCACATCCGGGTTGTCACCAGTGCGGGCATCCGGATGATGACGCTCAGCACGCACTCGAAGCGTGCCCGCGTTGGGAGCACCCGCGGCGAGATCTCATCGCGGTGCTGGGGAGGGACCTCTCCTTGCGGGCTGTCATTGCCCGCATGCTAGAGGACGAGAGTTCGTGGGAGGCCATGGCCAGATTTTGCGACCTGGTCATGGCGTTCCGCGAGGCTGAGGAGCGCGAAAGGGAGTGGAATCCCTCTTCGGCTCCTCAGCGAAGAAGGCGGGGTGGGCGACGCGGGCACGATGCTCCCGTTAATCTCCCGTAG

Protein

MSEKDLEVSSLRANVVSDDDMATVGSAQSSTRSSPTRRQRKRVLNISSDGLSSSSGSEAQGPSVAKPRAVTPSKRGRGRPPTTRQCVGMAAARKACLRAQREEREFTESARTTRQKKRAAEGSVPKPDAERRLHQSAEVALTVAAKSSSPKGTYVRALKELAATVKEATEDLVGRTATEEAERLRAINAKQEQEILQLRKELDEIRRELATVSQVLGNAPAAAPAPNTEEEEEELRLQRIMRAVGTMLDARFAGLEGRLLPEPRMRPPLAADRRKSREKSPDPPMVVDATLNSAPLLKPVPSTTSAKKRIRGPRRKATAQVAPPGTPTLLPAPASLIESWSTVTRRGTRPREGAVRTVPVVAPAEAGKKNPSSAKRKEKKLRPPRSQAVVLKLQPEAVERGLTYRSVLAEARAKVDPGALGIPIQRIRSAVTGAKVLVVEGADQSAKADLLAQKLREVLSAEGVTVTRPVTTAAIRISGLDDSLTPEEVAAEFARIGECTLEAVKIGEIKSGPSGMGQVLVRLPVAAATKVLAVPKLRVGWSVLRAHLLEAKKLQCFRCHELGHVSARCPSSVDRSRDCYRCGQTGHVASGCSLVPHCAVCASAGRPADHVSGSKACAKSPRPRPRRGASAALEHARRQPGVLRFLQGNLNHSARAQDLLFQSMAEGLTHLAVVAEPYRVPSSPDWAADLEGRVAIIRRCCVGAPPRFDVVERGCGFVAVLWAEVFILGVYFSPNRTLAEFEVFLSELSRVVGRSHSQRILVLGDLNAKSLAWGSSRTCPRGRAVEEWLVGSGLLVLNRGAELTCVRRLGGSVVDVTFATPDVANRVRGWAVMVGEETLSDHRYIRFGVAVPPAESIQGSSLLCGGGAGGPRWAQKRLNVERLCEAAVVQAWRLDSLGEPADVCEGVEHLREAMSRVCDAAMPRIRALAPKRRVHWWTEEIASQRRLCDVSRRAYQRYRRRRTHRDPDEEDRLYEVYRMAIRALRVAIGEAKEAAWNDLLASLDCDPTLPPETLQRVVGGLFPDFTGTAFVPPVMTTMRVADGREPADVSQAEFESAVQRMRAKRTAPGPDGISSRAWALALTGDGLGPALRRLFSRCLREGRFPEPWRTGRLVLIPKEGRPRDEPNGYRPIVVLDEAGKLFERVIANRLVQHLENVGPDLAPNQYGFRRGRSTVDAVLRVRHLSDCACSEGGVLLAVSIDIANAFNTIPWSTIVESLRFHRIPNSLRTLIEDYLSGRSVIFPERRGWGRKTVSCGVPQGSVLGPLLWDIGFDWVLRGAGLRGVDVVCYADDTLVTARGADYRTAAILATAAVSTVVSRIRRLGLEVALHKSEAVCFHPVRRGPPPGATLIVGGVSIAVQPKLKYLGIVLDSRWRFDHHFGELIPRLLGMAGALVRLLPNVGGCSVGVRRLYLGVVRSMALYGAPVWSPTLSARNAALLLRAQRALAVRVIRGYRTISREVACALAGSLPWDLEAEVLATVYRRRTQSLGRGRTPGLSAVSRWRRAARHLAYAKWRERLLEELHQTSATRRRTLEALVPVLETWSDRRHGVLSFRLTQVLSGHGCFGRYLWRVCRREPHPGCHQCGHPDDDAQHALEACPRWEHPRRDLIAVLGRDLSLRAVIARMLEDESSWEAMARFCDLVMAFREAEEREREWNPSSAPQRRRRGGRRGHDAPVNLP

Uniprot

A0A0J7KQK3   A0A0J7N0R3   A0A0J7NFZ0   A0A0J7KFH2   A0A0J7KRB8   A0A0J7KF91   + More
A0A0J7KIS5   J9KM84   X1WZ64   J9KJG8   X1WJY4   J9JWJ3   A0A139W939   A0A139W940   A0A139W9B3   A0A139WAH4   X1WXT5   J9KWM9   J9LQQ1   A0A139WN93   A0A139WNC9   J9KNS1  

Pubmed

18362917    19820115   

EMBL

LBMM01004272    KMQ92618.1    LBMM01012412    KMQ86235.1    LBMM01005474    KMQ91485.1    + More
LBMM01008278    KMQ89009.1    LBMM01003988    KMQ92922.1    LBMM01008445    KMQ88871.1    LBMM01006977    KMQ90149.1    ABLF02018942    ABLF02041885    ABLF02011183    ABLF02041884    ABLF02041886    ABLF02011238    ABLF02013358    ABLF02013361    ABLF02054869    KQ972691    KXZ75807.1    KXZ75806.1    KQ972544    KXZ75869.1    KQ971388    KYB24913.1    ABLF02004854    ABLF02041317    ABLF02011927    ABLF02030663    ABLF02041312    KQ971310    KYB29499.1    KYB29500.1    ABLF02018808   

Proteomes

UP000036403    UP000007819    UP000007266   

Pfam

PF14529   Exo_endo_phos_2        + More
PF00078   RVT_1
PF00098   zf-CCHC
PF00075   RNase_H

Interpro

IPR001878   Znf_CCHC        + More
IPR036875   Znf_CCHC_sf       
IPR036691   Endo/exonu/phosph_ase_sf       
IPR005135   Endo/exonuclease/phosphatase       
IPR000477   RT_dom       
IPR000663   Natr_peptide       
IPR012337   RNaseH-like_sf       
IPR002156   RNaseH_domain       
IPR036397   RNaseH_sf       

SUPFAM

SSF56219   SSF56219        + More
SSF57756   SSF57756       
SSF53098   SSF53098       

Gene 3D

3.60.10.10     3.30.420.10    

ProteinModelPortal

A0A0J7KQK3   A0A0J7N0R3   A0A0J7NFZ0   A0A0J7KFH2   A0A0J7KRB8   A0A0J7KF91   + More
A0A0J7KIS5   J9KM84   X1WZ64   J9KJG8   X1WJY4   J9JWJ3   A0A139W939   A0A139W940   A0A139W9B3   A0A139WAH4   X1WXT5   J9KWM9   J9LQQ1   A0A139WN93   A0A139WNC9   J9KNS1  

PDB

1WDU     E-value=2.41914e-08,     Score=146

KEGG

105842185    no KO assigned | (RefSeq) uncharacterized LOC105842185

GO

GO:0008270   GO:0003676   GO:0003964   GO:0016021   GO:0005179   GO:0005576   GO:0004523   GO:0050750   GO:0022857   GO:0005215   GO:0051103   GO:0005524   GO:0042555   GO:0048384  

Length:

1680

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0759100000000001

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00007

outside

1  -  1680

 

 

Pi

0

Theta

0

Tajima's D

0

CLR

59.129355

CSRT

0

Interpretation

Uncertain