Silkworm Genome Informatics Database

Gene

KWMTBOMO03615 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA006328

Annotation

PREDICTED:_ankyrin_repeat_domain-containing_protein_17-like_[Bombyx_mori]

Location

Bomo_Chr6(+):13577691-13585379 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.959

CDS

ATGTCACTCGGGAATACGGTAACAACGGAAAAGCGTCCGTCATCGAGTATTGGCGTGACGGCGAGCACCAGCAGCTCGGGCAGCACGGCGAGCAGCAAGGCGAGCACGGCGCTCTCGTACACGGGCGCCATCGTGGGCGCGCGCTCGCACACGTTCGCCGCCAAGCTCACCGCCAGCGTCGCGCCCCTCGCCCTCGCCGCCGCCGACCACAAGCCCAGACCTGCGCCACTGCAGCCAACGCCGAACAGCGGTCCGAGTCCGGCCGCGGTTTCCCCGCTGAAGTCTGCGCGAGAGAGCTCGCCGTCGCCCGCGCCCGCCACGCCCGTCTCCAGACCTGAAGAGGTTGACATTAAACAACCACGGCTACCCGAGAGAACGGTGCAGCTGAGTCCCGATACTACAAGCTCGTGGAGCACAAATGAAGACAACACGATCAACACATCCACGTCAACCACTGCTTTGCACATCAACACTACGCCGCAGTGCGGCGTTGTATCGAGCGGCAGCGGCGGTAGCGCCCCGGAGTACTCGCTGTTCAAGGACGTGTCGGGCGCCGCCACGCTGTGGTCCGCACCGGCTGAACATAATGAGCCGCCTCCACCGCAGGTGGACGCGAGCAAAGCGCCAGGGTACCGCGGGGGGAGCGGCGCGGGGACGGGGGCGGCGGGCGGGGGCTGCTCGCCGTGCTCCCGCACCTCGTCGCACGGCTCCACGCCGCCGCCTGCGTACGCGCCCTACCACACCGACCATATGCCGCACCACCACTCCCGACCCTCCTACCAGGACACGCCGCCCAGGAATAACATTATGGTATCGATGTCGAGCGGTGTCAACATGAGCGGAGTGAACATGAGTGGCGCCAACATGTCCGGCTCCTCCCTGGGGCTCGGCTACGTGGGGGTCGAAGGGGTGTCCCGGTTGAATCCCCGCGCGCCCGACTTCGCTCAACGGCACACGCTCATACACAACAAACACAATGCACAGCAATTGTTCGGTGGTGGCAGCAACCTGAGTAACTTACTCATGTACCAACAGCCTGTGTCGCAGTCGCCGAAACCGAACCATCAAACCCACCTTGCTTACCAGTCATTGCTGGATCGCGGCGTGAATGTCAGCGGAGTGGGTAACGTCGGCAGCGGTTGGGGCGCAGAAGAAGAGGAACGCAAGCCCCGTCCTATTGGAACTGAACGCGCGTGGAAACTCACCGCGGCCGAGGACTGGTCCCACGCCAACCTGCCGCACGCGACCGCGCACCACATGCAGGACCATGACCGCTATCAGGGTGTGTCGAACATGAGCGCCATGGGTGGCGTGGGTGTGGGTGTGGGCGGACTGGACGGGTCGGCGTACGGAGCGGGCGGACTGTCGCTGCTGCAGCTGCCTCTGCAGTACTTGCCGCCCACCGTCACCCCCGCGCCCGAACCCCCGCACCACTGGGACCCCGCCCCTCACCATGCACACGACAAACAGACCTGGAGCAAGTGGACTCACTAA

Protein

MSLGNTVTTEKRPSSSIGVTASTSSSGSTASSKASTALSYTGAIVGARSHTFAAKLTASVAPLALAAADHKPRPAPLQPTPNSGPSPAAVSPLKSARESSPSPAPATPVSRPEEVDIKQPRLPERTVQLSPDTTSSWSTNEDNTINTSTSTTALHINTTPQCGVVSSGSGGSAPEYSLFKDVSGAATLWSAPAEHNEPPPPQVDASKAPGYRGGSGAGTGAAGGGCSPCSRTSSHGSTPPPAYAPYHTDHMPHHHSRPSYQDTPPRNNIMVSMSSGVNMSGVNMSGANMSGSSLGLGYVGVEGVSRLNPRAPDFAQRHTLIHNKHNAQQLFGGGSNLSNLLMYQQPVSQSPKPNHQTHLAYQSLLDRGVNVSGVGNVGSGWGAEEEERKPRPIGTERAWKLTAAEDWSHANLPHATAHHMQDHDRYQGVSNMSAMGGVGVGVGGLDGSAYGAGGLSLLQLPLQYLPPTVTPAPEPPHHWDPAPHHAHDKQTWSKWTH

Uniprot

H9J9Y3 A0A2A4JTS2 A0A2A4JTK0 A0A2W1BZR1 A0A212F935

Pubmed

19121390 28756777 22118469

EMBL

BABH01026045 BABH01026046 BABH01026047 BABH01026048 NWSH01000685 PCG74792.1 + More
PCG74793.1 KZ149893 PZC78935.1 AGBW02009655 OWR50219.1

Proteomes

UP000005204 UP000218220 UP000007151

PRIDE

H9J9Y3

Pfam

PF00013 KH_1 + More
PF12796 Ank_2

Interpro

IPR036770   Ankyrin_rpt-contain_sf        + More
IPR020683   Ankyrin_rpt-contain_dom
IPR036612   KH_dom_type_1_sf
IPR004087   KH_dom
IPR004088   KH_dom_type_1
IPR002110   Ankyrin_rpt

SUPFAM

SSF54791 SSF54791 + More
SSF48403 SSF48403

Gene 3D

1.25.40.20 3.30.1370.10

CDD

cd00204 ANK

ProteinModelPortal

H9J9Y3 A0A2A4JTS2 A0A2A4JTK0 A0A2W1BZR1 A0A212F935

KEGG

101746836 K16726 ankyrin repeat domain-containing protein 17 | (RefSeq) ankyrin repeat domain-containing prote

GO

GO:0003723

Length:

497

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.1483

Exp number, first 60 AAs:

0.01784

Total prob of N-in:

0.00640

outside

1 - 497

Pi

28.477414

Theta

28.112363

Tajima's D

0.057

CLR

0.383473

CSRT

0.392530373481326

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics