Silkworm Genome Informatics Database

Gene

KWMTBOMO03614 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA006328

Annotation

PREDICTED:_ankyrin_repeat_domain-containing_protein_17-like_[Bombyx_mori]

Location

Bomo_Chr6(+):13565471-13577174 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.926

CDS

ATGCAGCAGAAGTCTCAGGAGATTCTCTCTGGTAAATGTGGAGAACTGGAAGGTGAATGGTTGGAGGGCGAGGAGCGCCACGCGCGCCGCCTGTTGGCCGCCGCCGAGCAGGCGCTCGCCACCGACTACACCACCAGGCACCACCATCACCACCACGTCGACGTACCGCAACAGCAGAACAACGGCTGTCAGTTCCGGGTAGGCGGGTCACCCCCGTCCGGTGCATTGGAGCCGACGACGCTGCCCCGGGGGACGGAGGAGGATGTGCAGCCGCCCCCCGACCTCCAACAGCACTTCGCCCTTCCACCTCCCACCCTTCCCTATGACGACTATAGATCGTCGTCGTACACCCCTCCGTTAACGGAACCCCAGCCCCGGCATCCGCAGCAGACAGCACCCCAGCAACACGCCAAGCGCGAACACCACCACGCCAATCCCACCAGCAAGAAAAAGAGTCGCGGCGGAGGCGCCAGCGGGGGCGCGCGGGCGCGGGTGGGGGAGGCGGCGGCACCCGCGGCGCCCGCGCCCGCCGCCTACTGCGCCATGGACGTGGACGGCGAGACCGACTCCAACCACGACACCGCACTCACGCTGGCGTGCGCCGGCGGCCACGAGGACCTCGTCGAGCTGCTGCTGTCCCGCGGGGCGGACATCGAGCATCGCGACAAGAAGGGTTTCACTCCACTTATCCTGGCGGCTACGGCCGGTCACGAGAAGATCGTCGAGATCCTTTTGAACCACGGCGCAGATATCGAGGCGCAGTCGGAACGCACAAAGGACACTCCCTTGTCGCTGGCGTGCAGCGGCGGCCGCTACGAAGTAGTCGAACTCATCCTCAGCCACGGCGCCAACAAGGAGCACCGCAACGTATCCGACTACACGCCACTGTCGCTGGCCGCCTCCGGGGGCTACGTCAACATCATCCGGCTACTGCTCACGCACCAGGCGGAAATCAATTCTCGCACTGGCTCGAAACTGGGTATATCACCGCTGATGTTGGCCGCCATGAACGGTCACACGGCAGCGGTGCGACTCCTTCTCGACTGCGGGTCCGATATTAATGCGCAGATAGAAACCAACAGGAACACGGCGCTCACCCTCGCTTGTTTCCAAGGTCGACATGAGGTCGTCAGCTTGTTGCTGGATCGCAAAGCGAACGTGGAGCACCGCGCCAAGACCGGCCTCACGCCGCTCATGGAGGCGGCCAGCGGCGGATACGTGGAGGTGGGACGCGTGCTGCTCGACAAGGGCGCTGACGTCAACGCGCCGCCCGTGCCCTCCTCCCGGGACACCGCCCTCACCATCGCCGCAGACAAGGGACACACCAAGTTCGTCGAACTGCTGCTGCAGAGGCGAGCCGCCGTCGAAGTAAAGAACAAGAAAGGCAACTCCCCCCTTTGGCTCGCCGCTAACGGCGGACATCTCGCCGTTGTCGAGATGCTGTACGCAGCCGGCGCTGACATCGACTCTCAAGACAATAGAAAGGTTTCGTGTTTGATGGCTGCCTTTCGTAAAGGTCACATAAAAGTGGTCAAATGGATGGTCGGGGTCGTCACGCAGTTCCCTTCAGATCAGGAGATGACTAGGTACATCTGTACCATCTCGGACAAGGAGCTTTTGGAGAAGTGCCAAGAGTGCGTGCGCGTGATCCGCGCCGCCAAGGAGACGCAGGCCGCACGCGCCAACCAGAACGCAACCATCCTCCTCGAAGAACTTGACGCAGAGAGAGAGCGGGAACTCTGTCGAAGGCAGGCCGCTGCCAGGAGACGGGAACGGAAGAAGAAGAAGAAGATGGAAAAAAAGGAGGAACGTCGCAAGATGCAAGCGGAGCCGGACAAGAACTCCGAATGTAGTGACAAAGCGCTCGGAGACTGTTCCGAGGGCGGCGAAGGGGACGACGAACCCAGCCCTAAGGAAGAGGGCGACTCCGGCATCGATGCCAACTCACAGGGTTCGTGTTCGTCGTCCGATGTGAAGGCTCCTCCCGTACAACCCGCCAAGAGTAAGAAAAAGAAAAAAGAGGACAAGGCATCTCCTCCACCACCTCCCAGTACCGTCAAGAAACAACCTGACAAACCTAAACCTAAGATAGAGACAAAACCCGAACGAGAACCAACTCCCAAACCTGACAAGAAGGAGAAGGAAAATGTAGCACCGTCTTCGCCGCCGACACCTAAACCGGTCGAGAGACGACTGCCCGAGCGGAAGGAGAAAAAATCCGAAGAGGAAAGTCCTAAGAGCATAACAGTAGCAAACGTTAACAAGTATGGAAACAACAGAAAGAGCCAGGTATTCGAATCGAGTCGGCTTAATTTGGACGATACAGAGACGACTGATAAAAATAAGAAGACCTCAAGCACACAACAATGGGAGATCGAAGCCAAGAGTACTTCTCCCAAAGCTGGTTGCGTCGGAGGTCGCCGCGAGGAGGGCTGGAAGGAAGTTGTGCGCAAATCTAGTGTACAAACTGTATCCACAGTCGAACCTGGGTGCAAGAAAGTGTCCGTTGCATCACACGCGATATCTCGTGTGATCGGTCGCGCTGGCAGTAACATTAACGCCATCCGCTCGGTCACCGGCGCCCACATCGAGGTCGACAAGCAAAGTAAGGGGCAGGGCGAGAGGATCATCACGATTAAGGGCTCGGCTGAAGCCACAAAGCAAGCCGGCGTTCTGATCGCAGCTATGATCCGCGACCCCGAGGCTGATCTGGGAGCGCTGCTGCCGCGCGCCAAGCCGGCCCCCGCACCGCATCCTGCCAAACCTGTCAAGCAACCCGCCGCCAAGCCTGGCCAGCCGGGCGCCCCGTGTCCGACGAGCAGCAGCGCGGCGCCGGCCCGCAGCGCGCCCGCCGCCCGCCCCGCGCCCGCACGCGTGCCCGCACGACACGCGCCCACACGTACGCACGGTAACATTCCTACGCCCTGA

Protein

MQQKSQEILSGKCGELEGEWLEGEERHARRLLAAAEQALATDYTTRHHHHHHVDVPQQQNNGCQFRVGGSPPSGALEPTTLPRGTEEDVQPPPDLQQHFALPPPTLPYDDYRSSSYTPPLTEPQPRHPQQTAPQQHAKREHHHANPTSKKKSRGGGASGGARARVGEAAAPAAPAPAAYCAMDVDGETDSNHDTALTLACAGGHEDLVELLLSRGADIEHRDKKGFTPLILAATAGHEKIVEILLNHGADIEAQSERTKDTPLSLACSGGRYEVVELILSHGANKEHRNVSDYTPLSLAASGGYVNIIRLLLTHQAEINSRTGSKLGISPLMLAAMNGHTAAVRLLLDCGSDINAQIETNRNTALTLACFQGRHEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYVEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHTKFVELLLQRRAAVEVKNKKGNSPLWLAANGGHLAVVEMLYAAGADIDSQDNRKVSCLMAAFRKGHIKVVKWMVGVVTQFPSDQEMTRYICTISDKELLEKCQECVRVIRAAKETQAARANQNATILLEELDAERERELCRRQAAARRRERKKKKKMEKKEERRKMQAEPDKNSECSDKALGDCSEGGEGDDEPSPKEEGDSGIDANSQGSCSSSDVKAPPVQPAKSKKKKKEDKASPPPPPSTVKKQPDKPKPKIETKPEREPTPKPDKKEKENVAPSSPPTPKPVERRLPERKEKKSEEESPKSITVANVNKYGNNRKSQVFESSRLNLDDTETTDKNKKTSSTQQWEIEAKSTSPKAGCVGGRREEGWKEVVRKSSVQTVSTVEPGCKKVSVASHAISRVIGRAGSNINAIRSVTGAHIEVDKQSKGQGERIITIKGSAEATKQAGVLIAAMIRDPEADLGALLPRAKPAPAPHPAKPVKQPAAKPGQPGAPCPTSSSAAPARSAPAARPAPARVPARHAPTRTHGNIPTP

Uniprot

H9J9Y3 A0A2H1WUX3 A0A194QFR9 A0A212F935

Pubmed

19121390 26354079 22118469

EMBL

BABH01026045 BABH01026046 BABH01026047 BABH01026048 ODYU01011244 SOQ56861.1 + More
KQ459011 KPJ04332.1 AGBW02009655 OWR50219.1

Proteomes

UP000005204 UP000053268 UP000007151

PRIDE

H9J9Y3

Pfam

PF00013 KH_1 + More
PF12796 Ank_2

Interpro

IPR036770   Ankyrin_rpt-contain_sf        + More
IPR020683   Ankyrin_rpt-contain_dom
IPR036612   KH_dom_type_1_sf
IPR004087   KH_dom
IPR004088   KH_dom_type_1
IPR002110   Ankyrin_rpt

SUPFAM

SSF54791 SSF54791 + More
SSF48403 SSF48403

Gene 3D

1.25.40.20 3.30.1370.10

CDD

cd00204 ANK

ProteinModelPortal

H9J9Y3 A0A2H1WUX3 A0A194QFR9 A0A212F935

PDB

6MOL E-value=1.90919e-48, Score=490

KEGG

101746836 K16726 ankyrin repeat domain-containing protein 17 | (RefSeq) ankyrin repeat domain-containing prote

GO

GO:0003723 GO:0016021 GO:0005515 GO:0003676 GO:0022857 GO:0005215 GO:0051103 GO:0005524 GO:0008270 GO:0042555 GO:0048384

Length:

975

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01158

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00037

outside

1 - 975

Pi

26.424825

Theta

28.750723

Tajima's D

-0.789285

CLR

0.617889

CSRT

0.181090945452727

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics